Cow genome map
Conread name: | LyN2-AR060E02LN05AFE02F |
Conread position: | 5-303 |
Cow position: | chrX:29032143-29032443 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 220 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 190, 72 |
Conread position: | 8-306 |
Cow position: | chrX:21815990-21816298 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 199 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 68, 50 |
Conread position: | 9-264 |
Cow position: | chrX:16416238-16416499 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 180 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 15-303 |
Cow position: | chrX:7425200-7425498 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 47, 257 |
Conread position: | 15-303 |
Cow position: | chrX:17631066-17630775 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 200 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 63, 200 |
Conread position: | 17-296 |
Cow position: | chrX:16284209-16283924 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 214 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 250 |
Conread position: | 17-307 |
Cow position: | chrX:38549186-38549477 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 205 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 61, 192 |
Conread position: | 21-303 |
Cow position: | chrX:40692996-40692723 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 207 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 57, 96 |
Conread position: | 23-292 |
Cow position: | chrX:11561899-11562172 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 201 |
Alignm E-value: | 1.99993e-41 |
Alignm gaps (pig, cow): | 122, 18 |
Conread position: | 27-269 |
Cow position: | chrX:17662849-17662597 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 177 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 51, 181 |
Conread position: | 29-257 |
Cow position: | chrX:26876131-26875899 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 166 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 47, 61 |
Conread position: | 29-291 |
Cow position: | chrX:33827272-33826998 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 199 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 29-303 |
Cow position: | chrX:24259828-24259553 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 192 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 128, 46 |
Conread position: | 29-390 |
Cow position: | chrX:8682180-8681803 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 279 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 91 |
Conread position: | 31-293 |
Cow position: | chrX:1978258-1978532 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 205 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 41, 18 |
Conread position: | 33-303 |
Cow position: | chrX:6563266-6563552 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 72 |
Conread position: | 33-303 |
Cow position: | chrX:15305534-15305271 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 190 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 45, 74 |
Conread position: | 35-303 |
Cow position: | chrX:25419405-25419126 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 208 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 36-296 |
Cow position: | chrX:38840645-38840906 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 200 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 40, 82 |
Conread position: | 36-306 |
Cow position: | chrX:2300690-2300956 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 188 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 43, 107 |
Conread position: | 37-281 |
Cow position: | chrX:160275-160023 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 187 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 46, 40 |
Conread position: | 37-302 |
Cow position: | chrX:13382082-13382358 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 190 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 40, 173 |
Conread position: | 37-303 |
Cow position: | chrX:2383247-2383521 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 192 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 39, 167 |
Conread position: | 37-308 |
Cow position: | chrX:20709830-20710109 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 194 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 41, 14 |
Conread position: | 38-303 |
Cow position: | chrX:13323241-13322967 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 187 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 33, 192 |
Conread position: | 39-264 |
Cow position: | chrX:7571666-7571894 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 154 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 32, 162 |
Conread position: | 39-275 |
Cow position: | chrX:29289336-29289581 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 162 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 39-284 |
Cow position: | chrX:1616291-1616032 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 184 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 19, 172 |
Conread position: | 39-292 |
Cow position: | chrX:32743298-32743555 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 119 |
Conread position: | 39-300 |
Cow position: | chrX:10866107-10865841 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 174 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 37, 238 |
Conread position: | 39-302 |
Cow position: | chrX:17541724-17541987 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 181 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 37, 165 |
Conread position: | 39-302 |
Cow position: | chrX:30162757-30163030 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 192 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 39-303 |
Cow position: | chrX:9161348-9161609 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 192 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 47, 100 |
Conread position: | 39-303 |
Cow position: | chrX:33803253-33802975 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 205 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 39-303 |
Cow position: | chrX:44053018-44053288 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 184 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 40-287 |
Cow position: | chrX:36692996-36693250 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 173 |
Alignm E-value: | 6e-32 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 40-303 |
Cow position: | chrX:39700988-39701252 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 192 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 43, 170 |
Conread position: | 40-306 |
Cow position: | chrX:11674825-11675097 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 184 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 38, 196 |
Conread position: | 41-303 |
Cow position: | chrX:47743837-47744120 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 200 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 49, 0 |
Conread position: | 42-292 |
Cow position: | chrX:36840636-36840890 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 194 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 88, 183 |
Conread position: | 43-269 |
Cow position: | chrX:27680167-27680391 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 159 |
Alignm E-value: | 7e-34 |
Alignm gaps (pig, cow): | 149, 157 |
Conread position: | 44-292 |
Cow position: | chrX:10302101-10302357 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 183 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 45-267 |
Cow position: | chrX:43647978-43647753 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 156 |
Alignm E-value: | 8e-25 |
Alignm gaps (pig, cow): | 32, 77 |
Conread position: | 45-284 |
Cow position: | chrX:25337945-25338197 (view UCSC Genome Browser custom track) |
Alignm length: | 253 |
Alignm identity: | 194 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 45-295 |
Cow position: | chrX:25571230-25570973 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 175 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 37, 157 |
Conread position: | 45-303 |
Cow position: | chrX:28111272-28111538 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 186 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 46-306 |
Cow position: | chrX:2786777-2786525 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 175 |
Alignm E-value: | 9e-26 |
Alignm gaps (pig, cow): | 170, 20 |
Conread position: | 47-275 |
Cow position: | chrX:45414532-45414297 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 155 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 36, 157 |
Conread position: | 47-280 |
Cow position: | chrX:41743681-41743919 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 171 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 47-291 |
Cow position: | chrX:28787134-28787370 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 170 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 165, 30 |
Conread position: | 47-303 |
Cow position: | chrX:19930424-19930681 (view UCSC Genome Browser custom track) |
Alignm length: | 261 |
Alignm identity: | 183 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 29, 147 |
Conread position: | 48-275 |
Cow position: | chrX:14900952-14900727 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 159 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 28, 154 |
Conread position: | 48-302 |
Cow position: | chrX:2648581-2648323 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 184 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 48-303 |
Cow position: | chrX:18456161-18456434 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 198 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 51-267 |
Cow position: | chrX:42381328-42381107 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 156 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 27, 151 |
Conread position: | 51-269 |
Cow position: | chrX:16790065-16789856 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 149 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 25, 91 |
Conread position: | 51-280 |
Cow position: | chrX:17725750-17725980 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 165 |
Alignm E-value: | 6e-33 |
Alignm gaps (pig, cow): | 104, 25 |
Conread position: | 51-281 |
Cow position: | chrX:34565069-34565287 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 162 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 140, 25 |
Conread position: | 51-288 |
Cow position: | chrX:7497017-7497254 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 163 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 108, 162 |
Conread position: | 51-303 |
Cow position: | chrX:11746614-11746874 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 190 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 25, 224 |
Conread position: | 51-303 |
Cow position: | chrX:21664951-21664691 (view UCSC Genome Browser custom track) |
Alignm length: | 263 |
Alignm identity: | 189 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 27, 39 |
Conread position: | 51-303 |
Cow position: | chrX:25232362-25232621 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 185 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 51-306 |
Cow position: | chrX:40788976-40789243 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 194 |
Alignm E-value: | 4.99997e-41 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 51-400 |
Cow position: | chrX:4482734-4483088 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 221 |
Conread position: | 53-279 |
Cow position: | chrX:35681119-35681347 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 162 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 25, 71 |
Conread position: | 53-303 |
Cow position: | chrX:30862076-30862344 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 182 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 54-287 |
Cow position: | chrX:20792043-20791801 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 176 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 54-303 |
Cow position: | chrX:35925742-35925985 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 169 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 167, 27 |
Conread position: | 55-303 |
Cow position: | chrX:630532-630281 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 182 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 23, 50 |
Conread position: | 56-257 |
Cow position: | chrX:13177688-13177484 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 145 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 20, 142 |
Conread position: | 61-262 |
Cow position: | chrX:35273137-35273344 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 146 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 36, 9 |
Conread position: | 63-292 |
Cow position: | chrX:41560455-41560234 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 168 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 15, 89 |
Conread position: | 66-295 |
Cow position: | chrX:19023225-19023463 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 165 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 78, 207 |
Conread position: | 89-308 |
Cow position: | chrX:31340516-31340744 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 161 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 59, 179 |
Conread position: | 90-396 |
Cow position: | chrX:38188271-38187956 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 223 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 7, 224 |
Conread position: | 92-269 |
Cow position: | chrX:25966855-25967031 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 132 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 109, 126 |
Conread position: | 95-273 |
Cow position: | chrX:32820847-32821029 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 131 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 64, 11 |
Conread position: | 98-258 |
Cow position: | chrX:30005089-30005251 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 132 |
Alignm E-value: | 8e-35 |
Alignm gaps (pig, cow): | 53, 76 |
Conread position: | 98-281 |
Cow position: | chrX:6479825-6480006 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 139 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 97, 23 |
Conread position: | 99-303 |
Cow position: | chrX:16514443-16514233 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 157 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 37, 123 |
Conread position: | 101-303 |
Cow position: | chrX:38999667-38999884 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 154 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 57, 17 |
Conread position: | 120-268 |
Cow position: | chrX:31273091-31273240 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 113 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 75, 24 |
Conread position: | 123-303 |
Cow position: | chrX:8913765-8913951 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 138 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 123-303 |
Cow position: | chrX:8915509-8915695 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 138 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 154-303 |
Cow position: | chrX:6656265-6656415 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 112 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 47, 63 |
Conread position: | 221-400 |
Cow position: | chrX:17216217-17216050 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 139 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 62, 74 |
Show alignments to all cow chromosomes.