Cow genome map
| Conread name: | LyN3-AR17G6 |
| Conread position: | 13-357 |
| Cow position: | chr11:9601575-9601913 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 84, 47 |
| Conread position: | 15-248 |
| Cow position: | chr11:31755197-31755423 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 16-227 |
| Cow position: | chr11:7117208-7116999 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 35, 83 |
| Conread position: | 17-347 |
| Cow position: | chr11:49558926-49559237 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 102, 25 |
| Conread position: | 19-357 |
| Cow position: | chr11:31926926-31926592 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 36 |
| Conread position: | 19-361 |
| Cow position: | chr11:71981777-71982108 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 20-337 |
| Cow position: | chr11:1489390-1489699 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 80, 115 |
| Conread position: | 21-357 |
| Cow position: | chr11:26564335-26564660 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 60, 101 |
| Conread position: | 21-361 |
| Cow position: | chr11:9216330-9216663 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 63, 48 |
| Conread position: | 22-357 |
| Cow position: | chr11:1495335-1495669 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 20 |
| Conread position: | 22-357 |
| Cow position: | chr11:29667854-29668189 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 16 |
| Conread position: | 22-357 |
| Cow position: | chr11:41169942-41170276 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 20 |
| Conread position: | 22-357 |
| Cow position: | chr11:43513880-43514213 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 22-357 |
| Cow position: | chr11:44252549-44252219 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 20 |
| Conread position: | 22-361 |
| Cow position: | chr11:3493746-3493410 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 20 |
| Conread position: | 22-361 |
| Cow position: | chr11:31861653-31861322 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 109 |
| Conread position: | 23-353 |
| Cow position: | chr11:7110356-7110692 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 77, 105 |
| Conread position: | 23-361 |
| Cow position: | chr11:12094318-12093982 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 19 |
| Conread position: | 23-361 |
| Cow position: | chr11:19063320-19063657 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 19 |
| Conread position: | 23-361 |
| Cow position: | chr11:85393062-85393389 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 19 |
| Conread position: | 24-357 |
| Cow position: | chr11:12357663-12357997 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 109 |
| Conread position: | 24-357 |
| Cow position: | chr11:19101743-19102076 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 106 |
| Conread position: | 24-357 |
| Cow position: | chr11:28053862-28054189 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 90 |
| Conread position: | 24-357 |
| Cow position: | chr11:38834683-38835015 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 109 |
| Conread position: | 24-357 |
| Cow position: | chr11:44156495-44156828 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 106 |
| Conread position: | 24-358 |
| Cow position: | chr11:36763502-36763169 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 59, 23 |
| Conread position: | 24-361 |
| Cow position: | chr11:15984387-15984041 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 249 |
| Conread position: | 24-361 |
| Cow position: | chr11:17546915-17546583 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 18 |
| Conread position: | 25-357 |
| Cow position: | chr11:26124175-26124507 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 105 |
| Conread position: | 27-361 |
| Cow position: | chr11:4063122-4063436 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 235 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 30-357 |
| Cow position: | chr11:24394059-24393739 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 277, 68 |
| Conread position: | 31-358 |
| Cow position: | chr11:50027135-50027452 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 69, 11 |
| Conread position: | 39-329 |
| Cow position: | chr11:26548248-26547958 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 91 |
| Conread position: | 39-353 |
| Cow position: | chr11:3855971-3855654 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 224 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 61, 94 |
| Conread position: | 39-357 |
| Cow position: | chr11:71330328-71330012 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 96 |
| Conread position: | 39-361 |
| Cow position: | chr11:4056739-4057061 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 226 |
| Conread position: | 43-357 |
| Cow position: | chr11:9156424-9156736 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 90 |
| Conread position: | 99-361 |
| Cow position: | chr11:28229080-28229340 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 208, 24 |
| Conread position: | 107-361 |
| Cow position: | chr11:52420059-52419806 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 200, 23 |
| Conread position: | 111-357 |
| Cow position: | chr11:4026896-4027140 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 21 |
| Conread position: | 122-361 |
| Cow position: | chr11:9734025-9734257 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 185, 67 |
| Conread position: | 125-357 |
| Cow position: | chr11:76373569-76373796 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 182, 9 |
| Conread position: | 134-357 |
| Cow position: | chr11:28391284-28391063 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 147-357 |
| Cow position: | chr11:66728006-66727794 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 42, 123 |
| Conread position: | 150-357 |
| Cow position: | chr11:42432761-42432566 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 183, 114 |
| Conread position: | 162-353 |
| Cow position: | chr11:14728520-14728710 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 145, 102 |
| Conread position: | 189-357 |
| Cow position: | chr11:22935661-22935499 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 237-361 |
| Cow position: | chr11:44491735-44491859 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 70, 27 |
Show alignments to all cow chromosomes.