Cow genome map
| Conread name: | LyN3-AR17G6 |
| Conread position: | 13-288 |
| Cow position: | chr15:2901768-2902038 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 70, 117 |
| Conread position: | 13-357 |
| Cow position: | chr15:6553126-6553457 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 87, 105 |
| Conread position: | 13-357 |
| Cow position: | chr15:10889321-10888982 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 116 |
| Conread position: | 13-357 |
| Cow position: | chr15:21450377-21450028 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 262 |
| Conread position: | 15-357 |
| Cow position: | chr15:580141-579805 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 85, 23 |
| Conread position: | 17-357 |
| Cow position: | chr15:9430636-9430304 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 272, 111 |
| Conread position: | 17-361 |
| Cow position: | chr15:3889582-3889239 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 99 |
| Conread position: | 19-361 |
| Cow position: | chr15:4672136-4671794 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 23 |
| Conread position: | 20-300 |
| Cow position: | chr15:17148821-17148550 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 20-358 |
| Cow position: | chr15:20356221-20356553 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 77, 30 |
| Conread position: | 22-191 |
| Cow position: | chr15:6386644-6386812 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 68, 108 |
| Conread position: | 22-344 |
| Cow position: | chr15:7234958-7234644 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 28, 98 |
| Conread position: | 22-357 |
| Cow position: | chr15:18332132-18332462 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 17 |
| Conread position: | 22-357 |
| Cow position: | chr15:21665046-21665381 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 112 |
| Conread position: | 22-357 |
| Cow position: | chr15:35646972-35647303 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 93 |
| Conread position: | 22-357 |
| Cow position: | chr15:35752619-35752951 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 108 |
| Conread position: | 23-357 |
| Cow position: | chr15:15346416-15346748 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 110 |
| Conread position: | 23-357 |
| Cow position: | chr15:31359576-31359247 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 111 |
| Conread position: | 23-361 |
| Cow position: | chr15:4813297-4812960 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 110 |
| Conread position: | 24-224 |
| Cow position: | chr15:32711921-32711722 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 24-353 |
| Cow position: | chr15:24295795-24295466 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 94 |
| Conread position: | 24-356 |
| Cow position: | chr15:6067480-6067809 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 21, 28 |
| Conread position: | 24-357 |
| Cow position: | chr15:5981043-5980713 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 27 |
| Conread position: | 24-357 |
| Cow position: | chr15:6155246-6155579 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 109 |
| Conread position: | 24-357 |
| Cow position: | chr15:8811328-8811660 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 94 |
| Conread position: | 24-361 |
| Cow position: | chr15:6591918-6592257 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 27 |
| Conread position: | 25-357 |
| Cow position: | chr15:3260623-3260954 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 22 |
| Conread position: | 25-357 |
| Cow position: | chr15:4386457-4386124 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 106 |
| Conread position: | 25-357 |
| Cow position: | chr15:4922845-4922515 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 105 |
| Conread position: | 25-357 |
| Cow position: | chr15:7261306-7260963 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 67, 25 |
| Conread position: | 25-357 |
| Cow position: | chr15:8100166-8099841 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 108 |
| Conread position: | 25-361 |
| Cow position: | chr15:32694260-32693930 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 93 |
| Conread position: | 25-361 |
| Cow position: | chr15:53136524-53136860 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 97 |
| Conread position: | 28-361 |
| Cow position: | chr15:36668439-36668098 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 11 |
| Conread position: | 29-357 |
| Cow position: | chr15:7837942-7837613 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 104 |
| Conread position: | 29-357 |
| Cow position: | chr15:51218296-51217968 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 104 |
| Conread position: | 29-361 |
| Cow position: | chr15:36625579-36625909 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 93 |
| Conread position: | 30-357 |
| Cow position: | chr15:2077349-2077014 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 103 |
| Conread position: | 32-361 |
| Cow position: | chr15:4962326-4961998 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 89 |
| Conread position: | 38-357 |
| Cow position: | chr15:32493704-32494020 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 95 |
| Conread position: | 49-357 |
| Cow position: | chr15:4765849-4765541 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 84 |
| Conread position: | 98-358 |
| Cow position: | chr15:17079589-17079842 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 209, 19 |
| Conread position: | 105-361 |
| Cow position: | chr15:4686213-4685959 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 108-361 |
| Cow position: | chr15:2588877-2589129 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 111, 9 |
| Conread position: | 129-357 |
| Cow position: | chr15:1300214-1300440 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 178, 57 |
| Conread position: | 134-361 |
| Cow position: | chr15:368580-368812 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 74, 135 |
| Conread position: | 223-361 |
| Cow position: | chr15:35736077-35735939 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 84, 40 |
Show alignments to all cow chromosomes.