Cow genome map
| Conread name: | LyN3-AR17G6 |
| Conread position: | 13-361 |
| Cow position: | chr2:28640261-28640603 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 234 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 43, 122 |
| Conread position: | 14-213 |
| Cow position: | chr2:194956-195151 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 70, 25 |
| Conread position: | 16-353 |
| Cow position: | chr2:51617836-51617500 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 61 |
| Conread position: | 17-357 |
| Cow position: | chr2:19011933-19011593 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 31 |
| Conread position: | 18-314 |
| Cow position: | chr2:36029783-36030075 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 210 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 19, 40 |
| Conread position: | 19-345 |
| Cow position: | chr2:6962102-6961776 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 111 |
| Conread position: | 19-361 |
| Cow position: | chr2:44990719-44991051 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 236 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 78, 19 |
| Conread position: | 19-361 |
| Cow position: | chr2:47811428-47811089 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 114 |
| Conread position: | 21-361 |
| Cow position: | chr2:15576264-15576595 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 286, 61 |
| Conread position: | 22-355 |
| Cow position: | chr2:73193682-73193366 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 17 |
| Conread position: | 22-357 |
| Cow position: | chr2:32065495-32065833 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 114 |
| Conread position: | 22-357 |
| Cow position: | chr2:52063127-52062792 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 108 |
| Conread position: | 22-361 |
| Cow position: | chr2:1691557-1691221 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 17 |
| Conread position: | 22-361 |
| Cow position: | chr2:10732185-10732530 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 117 |
| Conread position: | 22-361 |
| Cow position: | chr2:52617055-52616715 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 110 |
| Conread position: | 23-358 |
| Cow position: | chr2:37789345-37789694 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 60, 53 |
| Conread position: | 24-298 |
| Cow position: | chr2:5484419-5484683 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 91 |
| Conread position: | 24-355 |
| Cow position: | chr2:36980960-36980631 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 93 |
| Conread position: | 24-356 |
| Cow position: | chr2:5869802-5870133 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 113 |
| Conread position: | 24-357 |
| Cow position: | chr2:7903615-7903289 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 24-357 |
| Cow position: | chr2:10185645-10185977 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 109 |
| Conread position: | 24-357 |
| Cow position: | chr2:13045133-13045456 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 109 |
| Conread position: | 24-357 |
| Cow position: | chr2:24147443-24147117 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 18 |
| Conread position: | 24-357 |
| Cow position: | chr2:28649018-28649350 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 98 |
| Conread position: | 24-357 |
| Cow position: | chr2:28793831-28793495 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 243 |
| Conread position: | 24-357 |
| Cow position: | chr2:41173248-41172915 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 111 |
| Conread position: | 24-357 |
| Cow position: | chr2:53330342-53330005 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 109 |
| Conread position: | 24-357 |
| Cow position: | chr2:78743171-78742836 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 59, 18 |
| Conread position: | 24-357 |
| Cow position: | chr2:80292380-80292704 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 79, 109 |
| Conread position: | 24-357 |
| Cow position: | chr2:81257752-81257424 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 106 |
| Conread position: | 24-361 |
| Cow position: | chr2:2412217-2412553 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 94 |
| Conread position: | 24-361 |
| Cow position: | chr2:14823665-14823346 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 15 |
| Conread position: | 24-361 |
| Cow position: | chr2:49605523-49605188 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 109 |
| Conread position: | 25-357 |
| Cow position: | chr2:282109-282442 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 109 |
| Conread position: | 26-357 |
| Cow position: | chr2:16074930-16075250 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 71, 99 |
| Conread position: | 27-262 |
| Cow position: | chr2:28613758-28613990 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 31-357 |
| Cow position: | chr2:3834388-3834713 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 224 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 69, 102 |
| Conread position: | 39-329 |
| Cow position: | chr2:16291017-16290738 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 96 |
| Conread position: | 39-357 |
| Cow position: | chr2:16900818-16900500 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 91 |
| Conread position: | 39-361 |
| Cow position: | chr2:10611075-10611392 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 218 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 58, 92 |
| Conread position: | 40-259 |
| Cow position: | chr2:63291404-63291621 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 46, 82 |
| Conread position: | 41-361 |
| Cow position: | chr2:45964553-45964873 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 81 |
| Conread position: | 42-357 |
| Cow position: | chr2:53554517-53554212 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 218 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 265, 57 |
| Conread position: | 42-361 |
| Cow position: | chr2:31298347-31298041 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 19, 92 |
| Conread position: | 43-355 |
| Cow position: | chr2:13482092-13482416 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 57, 90 |
| Conread position: | 47-355 |
| Cow position: | chr2:65937895-65938200 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 86 |
| Conread position: | 54-353 |
| Cow position: | chr2:43961244-43960949 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 46, 81 |
| Conread position: | 54-355 |
| Cow position: | chr2:34051717-34051417 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 253, 79 |
| Conread position: | 81-357 |
| Cow position: | chr2:25888072-25888344 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 197 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 69, 36 |
| Conread position: | 136-357 |
| Cow position: | chr2:53745218-53744998 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 171, 100 |
| Conread position: | 137-333 |
| Cow position: | chr2:72598269-72598078 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 118, 96 |
| Conread position: | 216-357 |
| Cow position: | chr2:175156-175295 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 91, 48 |
Show alignments to all cow chromosomes.