Cow genome map
| Conread name: | LyN3-AR17G6 |
| Conread position: | 13-357 |
| Cow position: | chr3:58948594-58948251 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 37 |
| Conread position: | 14-361 |
| Cow position: | chr3:46860325-46860671 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 28 |
| Conread position: | 14-361 |
| Cow position: | chr3:50126648-50127002 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 147 |
| Conread position: | 15-361 |
| Cow position: | chr3:32622064-32622412 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 93 |
| Conread position: | 17-361 |
| Cow position: | chr3:49678773-49678433 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 54 |
| Conread position: | 19-357 |
| Cow position: | chr3:48058385-48058720 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 22 |
| Conread position: | 19-357 |
| Cow position: | chr3:59862346-59862009 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 115 |
| Conread position: | 22-357 |
| Cow position: | chr3:10240626-10240295 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 112 |
| Conread position: | 22-357 |
| Cow position: | chr3:45975476-45975137 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 115 |
| Conread position: | 22-357 |
| Cow position: | chr3:49544242-49544572 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 15 |
| Conread position: | 22-357 |
| Cow position: | chr3:66621151-66620818 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 20 |
| Conread position: | 22-361 |
| Cow position: | chr3:19800209-19800545 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 230 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 50, 20 |
| Conread position: | 22-361 |
| Cow position: | chr3:19879621-19879285 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 17 |
| Conread position: | 23-357 |
| Cow position: | chr3:56339449-56339782 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 111 |
| Conread position: | 23-357 |
| Cow position: | chr3:75040194-75040526 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 13 |
| Conread position: | 23-359 |
| Cow position: | chr3:29579594-29579258 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 109 |
| Conread position: | 24-357 |
| Cow position: | chr3:2709902-2710234 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 24-357 |
| Cow position: | chr3:18812467-18812143 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 17 |
| Conread position: | 24-357 |
| Cow position: | chr3:21181733-21182058 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 106 |
| Conread position: | 24-357 |
| Cow position: | chr3:40824356-40824026 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 106 |
| Conread position: | 24-358 |
| Cow position: | chr3:18541174-18541511 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 106 |
| Conread position: | 24-358 |
| Cow position: | chr3:72631041-72630709 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 106 |
| Conread position: | 24-361 |
| Cow position: | chr3:5884511-5884174 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 98 |
| Conread position: | 24-361 |
| Cow position: | chr3:18860380-18860043 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 107 |
| Conread position: | 25-355 |
| Cow position: | chr3:78026453-78026781 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 52 |
| Conread position: | 25-357 |
| Cow position: | chr3:45894586-45894916 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 97 |
| Conread position: | 27-357 |
| Cow position: | chr3:6877206-6877532 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 62 |
| Conread position: | 27-357 |
| Cow position: | chr3:19755985-19756314 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 12 |
| Conread position: | 28-301 |
| Cow position: | chr3:34090416-34090676 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 28-355 |
| Cow position: | chr3:2906808-2907133 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 37 |
| Conread position: | 30-361 |
| Cow position: | chr3:6686767-6686440 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 273, 12 |
| Conread position: | 39-246 |
| Cow position: | chr3:24588814-24589021 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 45, 94 |
| Conread position: | 39-357 |
| Cow position: | chr3:48229529-48229836 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 225 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 44, 83 |
| Conread position: | 39-361 |
| Cow position: | chr3:2869732-2869410 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 92 |
| Conread position: | 42-355 |
| Cow position: | chr3:57483781-57484089 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 42-357 |
| Cow position: | chr3:23289385-23289699 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 91 |
| Conread position: | 42-361 |
| Cow position: | chr3:41210784-41211103 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 213 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 55, 89 |
| Conread position: | 43-357 |
| Cow position: | chr3:64356846-64357155 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 91 |
| Conread position: | 49-347 |
| Cow position: | chr3:70888082-70887779 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 48, 86 |
| Conread position: | 54-352 |
| Cow position: | chr3:19889665-19889961 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 27, 73 |
| Conread position: | 99-360 |
| Cow position: | chr3:19939785-19939524 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 165 |
| Conread position: | 99-361 |
| Cow position: | chr3:36118554-36118294 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 208, 31 |
| Conread position: | 99-361 |
| Cow position: | chr3:40339221-40339482 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 167, 31 |
| Conread position: | 176-357 |
| Cow position: | chr3:56146102-56145920 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 214-357 |
| Cow position: | chr3:4028673-4028521 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 91, 50 |
Show alignments to all cow chromosomes.