Cow genome map
| Conread name: | LyN3-AR17G6 |
| Conread position: | 5-229 |
| Cow position: | chr5:9419181-9419406 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 97, 32 |
| Conread position: | 12-358 |
| Cow position: | chr5:14784491-14784826 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 23 |
| Conread position: | 13-357 |
| Cow position: | chr5:3503239-3503579 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 121 |
| Conread position: | 13-357 |
| Cow position: | chr5:3786800-3786459 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 117 |
| Conread position: | 13-357 |
| Cow position: | chr5:30580211-30579866 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 121 |
| Conread position: | 21-355 |
| Cow position: | chr5:45701185-45700853 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 112 |
| Conread position: | 22-357 |
| Cow position: | chr5:2915319-2914986 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 110 |
| Conread position: | 22-357 |
| Cow position: | chr5:37733217-37732888 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 93 |
| Conread position: | 22-357 |
| Cow position: | chr5:57481669-57482002 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 17 |
| Conread position: | 23-357 |
| Cow position: | chr5:34697474-34697140 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 110 |
| Conread position: | 23-357 |
| Cow position: | chr5:46629310-46629652 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 67, 247 |
| Conread position: | 24-294 |
| Cow position: | chr5:59283186-59282920 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 106 |
| Conread position: | 24-345 |
| Cow position: | chr5:53625053-53625342 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 24-356 |
| Cow position: | chr5:32947929-32947594 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 109 |
| Conread position: | 24-357 |
| Cow position: | chr5:4070078-4069757 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 227 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 283, 49 |
| Conread position: | 24-357 |
| Cow position: | chr5:6154032-6154363 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 18 |
| Conread position: | 24-357 |
| Cow position: | chr5:10919694-10919362 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 36 |
| Conread position: | 24-357 |
| Cow position: | chr5:24099536-24099209 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 106 |
| Conread position: | 24-357 |
| Cow position: | chr5:32308524-32308855 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 104 |
| Conread position: | 24-357 |
| Cow position: | chr5:49519430-49519100 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 94 |
| Conread position: | 24-357 |
| Cow position: | chr5:55628861-55628528 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 109 |
| Conread position: | 24-357 |
| Cow position: | chr5:64781146-64781478 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 109 |
| Conread position: | 24-357 |
| Cow position: | chr5:73488689-73489021 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 52 |
| Conread position: | 24-361 |
| Cow position: | chr5:29766765-29766421 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 117 |
| Conread position: | 26-361 |
| Cow position: | chr5:41960870-41961191 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 16 |
| Conread position: | 27-361 |
| Cow position: | chr5:47830205-47830539 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 104 |
| Conread position: | 28-317 |
| Cow position: | chr5:27055813-27056105 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 95 |
| Conread position: | 28-357 |
| Cow position: | chr5:46737712-46738037 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 11 |
| Conread position: | 28-361 |
| Cow position: | chr5:59639641-59639314 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 72, 96 |
| Conread position: | 30-357 |
| Cow position: | chr5:1341169-1341495 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 83 |
| Conread position: | 31-361 |
| Cow position: | chr5:39245949-39246279 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 104 |
| Conread position: | 39-358 |
| Cow position: | chr5:54791781-54792101 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 61 |
| Conread position: | 43-317 |
| Cow position: | chr5:14344569-14344828 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 264, 39 |
| Conread position: | 44-347 |
| Cow position: | chr5:27002854-27002556 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 69-320 |
| Cow position: | chr5:35526621-35526375 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 31, 64 |
| Conread position: | 88-347 |
| Cow position: | chr5:28950053-28950319 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 36, 182 |
| Conread position: | 135-357 |
| Cow position: | chr5:28024269-28024049 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 78, 119 |
| Conread position: | 208-357 |
| Cow position: | chr5:415032-415180 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 99, 56 |
Show alignments to all cow chromosomes.