Cow genome map

Conread name: LyN3-AR17G6

Conread position: 13-357
Cow position: chr6:5948756-5949096 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 117

Conread position: 13-361
Cow position: chr6:13316452-13316798 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 117

Conread position: 17-361
Cow position: chr6:43618733-43618389 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 114

Conread position: 18-353
Cow position: chr6:1821609-1821945 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 112

Conread position: 19-357
Cow position: chr6:11724104-11724429 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 224
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 102, 0

Conread position: 20-347
Cow position: chr6:34891110-34891437 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 110

Conread position: 20-357
Cow position: chr6:27528986-27529327 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 114

Conread position: 21-348
Cow position: chr6:1099149-1099472 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 218
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 249, 18

Conread position: 22-356
Cow position: chr6:8203195-8202861 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 100

Conread position: 22-357
Cow position: chr6:3276362-3276697 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 100

Conread position: 22-357
Cow position: chr6:3888492-3888803 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 218
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 61, 108

Conread position: 22-357
Cow position: chr6:28169914-28169581 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 17

Conread position: 22-357
Cow position: chr6:30273885-30274214 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 20

Conread position: 22-361
Cow position: chr6:6474853-6475194 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 128

Conread position: 22-361
Cow position: chr6:13105070-13104731 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 109

Conread position: 22-361
Cow position: chr6:30480113-30479779 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 53

Conread position: 23-205
Cow position: chr6:36527311-36527130 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 107

Conread position: 23-242
Cow position: chr6:18973396-18973616 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 169
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 77, 19

Conread position: 23-357
Cow position: chr6:914641-914312 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 100

Conread position: 23-357
Cow position: chr6:65882222-65881890 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 110

Conread position: 23-359
Cow position: chr6:58027684-58027350 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 110

Conread position: 24-352
Cow position: chr6:40866314-40866635 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 100

Conread position: 24-357
Cow position: chr6:15140167-15140504 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 109

Conread position: 24-357
Cow position: chr6:15278801-15279129 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 106

Conread position: 24-357
Cow position: chr6:24240063-24239735 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 100

Conread position: 24-357
Cow position: chr6:39333859-39334192 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 107

Conread position: 24-357
Cow position: chr6:47042191-47042520 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 106

Conread position: 24-357
Cow position: chr6:51086953-51086620 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 106

Conread position: 24-361
Cow position: chr6:330453-330792 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 243

Conread position: 24-361
Cow position: chr6:38271899-38271575 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 106

Conread position: 24-361
Cow position: chr6:44000071-43999735 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 95

Conread position: 24-361
Cow position: chr6:59918065-59918393 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 124

Conread position: 25-357
Cow position: chr6:21973663-21973334 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 108

Conread position: 25-361
Cow position: chr6:184775-185109 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 96

Conread position: 26-297
Cow position: chr6:34443921-34443652 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 177
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 15

Conread position: 27-353
Cow position: chr6:31565152-31565471 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 217
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 56, 11

Conread position: 29-322
Cow position: chr6:10644744-10644458 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 209
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 54, 13

Conread position: 29-352
Cow position: chr6:28133935-28133617 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 93

Conread position: 29-356
Cow position: chr6:58601487-58601160 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 95

Conread position: 29-361
Cow position: chr6:68027931-68027595 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 226
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 71, 10

Conread position: 31-361
Cow position: chr6:12665316-12665646 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 100

Conread position: 42-317
Cow position: chr6:58065732-58065451 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 88

Conread position: 42-355
Cow position: chr6:11404522-11404210 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 214
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 13, 124

Conread position: 42-357
Cow position: chr6:8760298-8760622 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 222
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 61, 93

Conread position: 42-357
Cow position: chr6:25215211-25214901 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 88

Conread position: 42-357
Cow position: chr6:40316381-40316063 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 96

Conread position: 42-357
Cow position: chr6:56042724-56043042 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 12

Conread position: 50-361
Cow position: chr6:7140479-7140788 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 68

Conread position: 58-357
Cow position: chr6:3487447-3487744 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 75

Conread position: 60-357
Cow position: chr6:51731071-51730775 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 73

Conread position: 99-361
Cow position: chr6:66232749-66232487 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 33

Conread position: 129-361
Cow position: chr6:10609812-10609579 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 67, 106

Conread position: 134-357
Cow position: chr6:38900272-38900496 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 13, 131

Conread position: 171-318
Cow position: chr6:48369973-48369825 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 136, 0

Conread position: 192-357
Cow position: chr6:55542406-55542575 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 113, 72

Show alignments to all cow chromosomes.