Cow genome map
| Conread name: | LyN3-AR17G6 |
| Conread position: | 11-220 |
| Cow position: | chr7:27606215-27606423 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 22, 76 |
| Conread position: | 13-357 |
| Cow position: | chr7:61578567-61578223 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 120 |
| Conread position: | 15-345 |
| Cow position: | chr7:48635536-48635210 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 119 |
| Conread position: | 15-357 |
| Cow position: | chr7:23837682-23837341 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 109, 68 |
| Conread position: | 17-347 |
| Cow position: | chr7:54670965-54671304 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 33 |
| Conread position: | 18-352 |
| Cow position: | chr7:63386835-63386499 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 98 |
| Conread position: | 18-361 |
| Cow position: | chr7:995621-995280 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 56 |
| Conread position: | 21-264 |
| Cow position: | chr7:1609543-1609784 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 62, 17 |
| Conread position: | 21-345 |
| Cow position: | chr7:15810357-15810678 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 15 |
| Conread position: | 22-220 |
| Cow position: | chr7:66905823-66905628 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 84, 108 |
| Conread position: | 22-282 |
| Cow position: | chr7:34150407-34150151 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 78, 108 |
| Conread position: | 22-337 |
| Cow position: | chr7:68481649-68481340 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 28, 112 |
| Conread position: | 22-357 |
| Cow position: | chr7:1371543-1371877 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 108 |
| Conread position: | 22-357 |
| Cow position: | chr7:14138494-14138826 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 20 |
| Conread position: | 22-357 |
| Cow position: | chr7:33405141-33405472 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 20 |
| Conread position: | 22-357 |
| Cow position: | chr7:55536826-55537151 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 20 |
| Conread position: | 22-357 |
| Cow position: | chr7:57563996-57564322 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 216 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 62, 101 |
| Conread position: | 22-361 |
| Cow position: | chr7:42871244-42870908 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 96 |
| Conread position: | 23-357 |
| Cow position: | chr7:10430321-10430650 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 110 |
| Conread position: | 24-355 |
| Cow position: | chr7:64239903-64240239 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 18 |
| Conread position: | 24-357 |
| Cow position: | chr7:526077-525744 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 39 |
| Conread position: | 24-357 |
| Cow position: | chr7:5309013-5309339 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 24-357 |
| Cow position: | chr7:8144133-8144470 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 24-357 |
| Cow position: | chr7:21126561-21126894 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 109 |
| Conread position: | 24-357 |
| Cow position: | chr7:21986527-21986195 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 109 |
| Conread position: | 24-357 |
| Cow position: | chr7:27787730-27787403 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 15 |
| Conread position: | 24-357 |
| Cow position: | chr7:34487017-34486683 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 106 |
| Conread position: | 24-357 |
| Cow position: | chr7:46900981-46901304 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 230 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 76, 15 |
| Conread position: | 24-357 |
| Cow position: | chr7:67429674-67429342 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 109 |
| Conread position: | 25-303 |
| Cow position: | chr7:33332660-33332389 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 97 |
| Conread position: | 25-334 |
| Cow position: | chr7:3156571-3156256 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 246 |
| Conread position: | 25-357 |
| Cow position: | chr7:445250-445572 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 75, 13 |
| Conread position: | 25-357 |
| Cow position: | chr7:67799923-67799603 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 46 |
| Conread position: | 29-330 |
| Cow position: | chr7:65458092-65458394 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 71, 13 |
| Conread position: | 30-357 |
| Cow position: | chr7:29471554-29471227 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 92 |
| Conread position: | 30-357 |
| Cow position: | chr7:38397908-38397583 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 9 |
| Conread position: | 30-361 |
| Cow position: | chr7:20514681-20515012 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 221 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 70, 101 |
| Conread position: | 31-361 |
| Cow position: | chr7:59679941-59679614 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 223 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 52, 87 |
| Conread position: | 38-361 |
| Cow position: | chr7:7258260-7257938 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 217 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 59, 93 |
| Conread position: | 39-302 |
| Cow position: | chr7:13532817-13533076 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 64, 91 |
| Conread position: | 39-357 |
| Cow position: | chr7:21233926-21234245 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 61 |
| Conread position: | 39-357 |
| Cow position: | chr7:24807371-24807687 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 94 |
| Conread position: | 39-361 |
| Cow position: | chr7:6647570-6647893 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 220 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 25, 93 |
| Conread position: | 42-357 |
| Cow position: | chr7:19269349-19269660 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 91 |
| Conread position: | 42-357 |
| Cow position: | chr7:27583637-27583949 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 265, 85 |
| Conread position: | 42-361 |
| Cow position: | chr7:11462962-11463282 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 214 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 58, 223 |
| Conread position: | 57-356 |
| Cow position: | chr7:54643420-54643722 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 69 |
| Conread position: | 99-357 |
| Cow position: | chr7:59138682-59138428 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 185 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 208, 33 |
| Conread position: | 117-361 |
| Cow position: | chr7:59684188-59683948 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 15 |
| Conread position: | 186-357 |
| Cow position: | chr7:32727575-32727747 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 100, 78 |
Show alignments to all cow chromosomes.