Cow genome map

Conread name: LyN3-AR17G6

Conread position: 10-357
Cow position: chrX:30365928-30366263 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 239
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 90, 29

Conread position: 14-357
Cow position: chrX:20720851-20720503 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 104

Conread position: 14-361
Cow position: chrX:16015584-16015921 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 28

Conread position: 14-361
Cow position: chrX:21589823-21589477 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 119

Conread position: 15-358
Cow position: chrX:44388626-44388283 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 120

Conread position: 19-357
Cow position: chrX:38148441-38148106 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 111

Conread position: 20-347
Cow position: chrX:6014074-6014393 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 223
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 18, 100

Conread position: 20-361
Cow position: chrX:6281909-6282244 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 102

Conread position: 20-361
Cow position: chrX:37813013-37812671 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 58

Conread position: 21-335
Cow position: chrX:12183766-12183451 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 104

Conread position: 22-355
Cow position: chrX:13053854-13053521 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 20

Conread position: 22-357
Cow position: chrX:1547824-1547492 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 103

Conread position: 22-357
Cow position: chrX:5296698-5297035 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 114

Conread position: 22-357
Cow position: chrX:13416589-13416917 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 20

Conread position: 22-357
Cow position: chrX:21059629-21059294 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 102

Conread position: 22-357
Cow position: chrX:21830375-21830044 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 16

Conread position: 22-361
Cow position: chrX:14595695-14595362 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 232
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 51, 111

Conread position: 22-361
Cow position: chrX:16362275-16362615 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 110

Conread position: 22-361
Cow position: chrX:39563088-39563425 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 233
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 61, 96

Conread position: 23-218
Cow position: chrX:29793186-29793382 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 108

Conread position: 23-330
Cow position: chrX:29286279-29285970 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 244

Conread position: 23-361
Cow position: chrX:5322880-5323214 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 100

Conread position: 24-312
Cow position: chrX:23455171-23455460 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 106

Conread position: 24-356
Cow position: chrX:23389671-23390003 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 106

Conread position: 24-357
Cow position: chrX:321311-320983 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 106

Conread position: 24-357
Cow position: chrX:2481785-2482117 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 17

Conread position: 24-357
Cow position: chrX:4797170-4796831 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 98

Conread position: 24-357
Cow position: chrX:18952836-18953168 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 18

Conread position: 24-357
Cow position: chrX:23040278-23040609 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 18

Conread position: 24-357
Cow position: chrX:23277872-23277541 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 109

Conread position: 24-357
Cow position: chrX:27316121-27315788 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 110

Conread position: 24-357
Cow position: chrX:29852718-29853052 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 112

Conread position: 24-361
Cow position: chrX:5394165-5394501 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 27

Conread position: 24-361
Cow position: chrX:12343781-12343451 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 224
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 73, 107

Conread position: 24-361
Cow position: chrX:32066319-32066656 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 107

Conread position: 25-357
Cow position: chrX:21580311-21579981 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 109

Conread position: 25-357
Cow position: chrX:24134408-24134743 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 225
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 72, 33

Conread position: 25-357
Cow position: chrX:26757770-26758098 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 108

Conread position: 26-314
Cow position: chrX:9093402-9093114 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 104

Conread position: 30-357
Cow position: chrX:26528815-26528491 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 99

Conread position: 30-361
Cow position: chrX:28554449-28554125 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 18

Conread position: 30-361
Cow position: chrX:31494260-31493927 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 236

Conread position: 39-357
Cow position: chrX:13412301-13412619 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 94

Conread position: 39-357
Cow position: chrX:15126405-15126723 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 91

Conread position: 39-357
Cow position: chrX:29949774-29950086 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 225
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 63, 12

Conread position: 39-361
Cow position: chrX:8480480-8480159 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 215
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 61, 92

Conread position: 60-357
Cow position: chrX:19875200-19874904 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 40, 73

Conread position: 99-360
Cow position: chrX:30139923-30140187 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 33

Conread position: 101-357
Cow position: chrX:971543-971288 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 206, 32

Conread position: 109-357
Cow position: chrX:22129015-22129262 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 198, 7

Conread position: 160-353
Cow position: chrX:10385037-10384845 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 119, 105

Conread position: 160-357
Cow position: chrX:21490894-21490698 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 103, 92

Conread position: 175-357
Cow position: chrX:31372508-31372330 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 141
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 132, 61

Conread position: 180-361
Cow position: chrX:28633737-28633918 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 123
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 46, 42

Conread position: 199-357
Cow position: chrX:18535173-18535020 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 66

Conread position: 228-361
Cow position: chrX:27495560-27495427 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 79, 36

Show alignments to all cow chromosomes.