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Cow genome map

           
Conread name:
           
Lym1-jns19bF07.f
        

               
Conread position:
               
1-305
               

               
Cow position:
               
chr11:46746241-46746538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 41
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr11:27681107-27681411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr11:62376831-62376521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 121
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr11:13499623-13499937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 15
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr11:62979083-62979411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 121
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr11:48901463-48901145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
201, 112
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr11:68571066-68570730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 114
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr11:59702090-59702437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 121
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr11:8525496-8525161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
10, 23
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr11:50153211-50152835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr11:17890116-17889750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 51
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr11:38810731-38810367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 110
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr11:81174496-81174873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 124
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr11:49550465-49550208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
202, 9
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chr11:78480408-78480684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
141, 9
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr11:10294205-10294493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
97, 9
               

               
Conread position:
               
2-302
               

               
Cow position:
               
chr11:7924976-7924674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
202, 9
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr11:17279048-17278754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 9
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr11:40250992-40250691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
202, 9
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr11:61454928-61454605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 120
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr11:30708101-30708427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
99, 9
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr11:37118092-37118412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 119
               

               
Conread position:
               
2-327
               

               
Cow position:
               
chr11:18509400-18509081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 8
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr11:3303443-3303784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 120
               

               
Conread position:
               
2-350
               

               
Cow position:
               
chr11:47586740-47586390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 82
               

               
Conread position:
               
2-359
               

               
Cow position:
               
chr11:19238550-19238192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
9, 108
               

               
Conread position:
               
2-361
               

               
Cow position:
               
chr11:35579863-35580235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
202, 8
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr11:7589801-7590173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
202, 8
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr11:49152548-49152930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 297
               

               
Conread position:
               
2-369
               

               
Cow position:
               
chr11:76369912-76369539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
9, 95
               

               
Conread position:
               
2-374
               

               
Cow position:
               
chr11:41239665-41239280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 120
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr11:81337358-81337101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr11:27939094-27939397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 115
               

               
Conread position:
               
3-317
               

               
Cow position:
               
chr11:23138464-23138136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 155
               

               
Conread position:
               
6-327
               

               
Cow position:
               
chr11:43361177-43360847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
160, 5
               

               
Conread position:
               
10-265
               

               
Cow position:
               
chr11:56751764-56751514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 96
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr11:58990126-58990423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 106
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr11:84774733-84775020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
250, 111
               

               
Conread position:
               
10-311
               

               
Cow position:
               
chr11:55347881-55348183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 91
               

               
Conread position:
               
10-314
               

               
Cow position:
               
chr11:40819029-40818718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 101
               

               
Conread position:
               
10-315
               

               
Cow position:
               
chr11:58587959-58588267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 101
               

               
Conread position:
               
10-316
               

               
Cow position:
               
chr11:70838681-70838371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
194, 22
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr11:31352955-31352646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 111
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr11:31885128-31885441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
98, 69
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr11:40486306-40486014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
193, 91
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr11:44818724-44819025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
193, 91
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr11:48672324-48672636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 111
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr11:53778232-53778538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 83
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr11:71846733-71846423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 111
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr11:74929396-74929706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 112
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr11:85764575-85764861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
121, 70
               

               
Conread position:
               
10-343
               

               
Cow position:
               
chr11:1486254-1485913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 112
               

               
Conread position:
               
10-348
               

               
Cow position:
               
chr11:25336687-25337028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
113, 152
               

               
Conread position:
               
10-350
               

               
Cow position:
               
chr11:34112879-34113226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
107, 200
               

               
Conread position:
               
10-362
               

               
Cow position:
               
chr11:84386021-84385660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 107
               

               
Conread position:
               
10-365
               

               
Cow position:
               
chr11:25792077-25791714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 111
               

               
Conread position:
               
10-366
               

               
Cow position:
               
chr11:41577389-41577039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 111
               

               
Conread position:
               
10-366
               

               
Cow position:
               
chr11:61427230-61427575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
193, 106
               

               
Conread position:
               
10-372
               

               
Cow position:
               
chr11:77745648-77745265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 217
               

               
Conread position:
               
10-373
               

               
Cow position:
               
chr11:32749723-32750102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 111
               

               
Conread position:
               
10-374
               

               
Cow position:
               
chr11:43524239-43524597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 8
               

               
Conread position:
               
11-308
               

               
Cow position:
               
chr11:40798-41096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
193, 105
               

               
Conread position:
               
11-317
               

               
Cow position:
               
chr11:27386723-27386419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 110
               

               
Conread position:
               
11-347
               

               
Cow position:
               
chr11:3769670-3769341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 85
               

               
Conread position:
               
12-195
               

               
Cow position:
               
chr11:74738667-74738848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
12-244
               

               
Cow position:
               
chr11:15681300-15681071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
219, 98
               

               
Conread position:
               
14-263
               

               
Cow position:
               
chr11:35506497-35506742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
18-308
               

               
Cow position:
               
chr11:29947313-29947017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 58
               

               
Conread position:
               
18-308
               

               
Cow position:
               
chr11:50197821-50197522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 103
               

               
Conread position:
               
18-309
               

               
Cow position:
               
chr11:20601863-20602144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 98
               

               
Conread position:
               
18-317
               

               
Cow position:
               
chr11:24967089-24967377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
255, 93
               

               
Conread position:
               
18-317
               

               
Cow position:
               
chr11:77759133-77758835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
187, 85
               

               
Conread position:
               
18-327
               

               
Cow position:
               
chr11:66897175-66896861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 18
               

               
Conread position:
               
18-366
               

               
Cow position:
               
chr11:63469509-63469856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 98
               

               
Conread position:
               
18-372
               

               
Cow position:
               
chr11:45282560-45282915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 96
               

               
Conread position:
               
18-373
               

               
Cow position:
               
chr11:4731962-4732330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 103
               

               
Conread position:
               
18-374
               

               
Cow position:
               
chr11:33350078-33349712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 96
               

               
Conread position:
               
18-374
               

               
Cow position:
               
chr11:33413857-33414225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 103
               

               
Conread position:
               
18-375
               

               
Cow position:
               
chr11:49105678-49106047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 23
               

               
Conread position:
               
20-358
               

               
Cow position:
               
chr11:34412725-34413066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 81
               

               
Conread position:
               
22-365
               

               
Cow position:
               
chr11:23128924-23128560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
97, 76
               

               
Conread position:
               
22-382
               

               
Cow position:
               
chr11:70484235-70483868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 100
               

               
Conread position:
               
24-327
               

               
Cow position:
               
chr11:8495667-8495978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
179, 97
               

               
Conread position:
               
25-306
               

               
Cow position:
               
chr11:68207217-68206927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 134
               

               
Conread position:
               
25-308
               

               
Cow position:
               
chr11:25808125-25807841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
179, 83
               

               
Conread position:
               
25-309
               

               
Cow position:
               
chr11:259554-259258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
25-310
               

               
Cow position:
               
chr11:15503732-15504022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 96
               

               
Conread position:
               
25-317
               

               
Cow position:
               
chr11:44642650-44642364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 54
               

               
Conread position:
               
25-317
               

               
Cow position:
               
chr11:77751135-77750849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 96
               

               
Conread position:
               
25-327
               

               
Cow position:
               
chr11:17321292-17321595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 84
               

               
Conread position:
               
25-327
               

               
Cow position:
               
chr11:21894519-21894221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 46
               

               
Conread position:
               
25-355
               

               
Cow position:
               
chr11:61137567-61137242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
245, 96
               

               
Conread position:
               
25-366
               

               
Cow position:
               
chr11:3833717-3833378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 91
               

               
Conread position:
               
25-366
               

               
Cow position:
               
chr11:23251973-23251610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 91
               

               
Conread position:
               
25-366
               

               
Cow position:
               
chr11:25386701-25387047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 89
               

               
Conread position:
               
25-366
               

               
Cow position:
               
chr11:69118930-69119274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 96
               

               
Conread position:
               
25-374
               

               
Cow position:
               
chr11:10076405-10076757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 89
               

               
Conread position:
               
25-374
               

               
Cow position:
               
chr11:52297589-52297230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 62
               

               
Conread position:
               
26-305
               

               
Cow position:
               
chr11:48428714-48428994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
84, 162
               

               
Conread position:
               
26-371
               

               
Cow position:
               
chr11:64043881-64044227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
179, 53
               

               
Conread position:
               
31-381
               

               
Cow position:
               
chr11:40467487-40467129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 90
               

               
Conread position:
               
33-350
               

               
Cow position:
               
chr11:67746916-67747239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 83
               

               
Conread position:
               
35-309
               

               
Cow position:
               
chr11:35881547-35881825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 229
               

               
Conread position:
               
35-309
               

               
Cow position:
               
chr11:65409521-65409240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 245
               

               
Conread position:
               
35-311
               

               
Cow position:
               
chr11:55117114-55117397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 63
               

               
Conread position:
               
35-317
               

               
Cow position:
               
chr11:951915-952190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
170, 40
               

               
Conread position:
               
35-317
               

               
Cow position:
               
chr11:38235878-38236166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
82, 231
               

               
Conread position:
               
35-317
               

               
Cow position:
               
chr11:44233998-44234275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 84
               

               
Conread position:
               
35-327
               

               
Cow position:
               
chr11:3393569-3393276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 86
               

               
Conread position:
               
35-327
               

               
Cow position:
               
chr11:44637120-44636822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 86
               

               
Conread position:
               
35-327
               

               
Cow position:
               
chr11:53130456-53130747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 66
               

               
Conread position:
               
35-327
               

               
Cow position:
               
chr11:76114293-76114587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
35-327
               

               
Cow position:
               
chr11:77705405-77705691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
109, 81
               

               
Conread position:
               
35-327
               

               
Cow position:
               
chr11:84891103-84890814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
35-346
               

               
Cow position:
               
chr11:30191804-30192130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
35-348
               

               
Cow position:
               
chr11:73512779-73512477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 81
               

               
Conread position:
               
35-362
               

               
Cow position:
               
chr11:2091988-2092313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
169, 86
               

               
Conread position:
               
35-362
               

               
Cow position:
               
chr11:27248133-27248470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
120, 79
               

               
Conread position:
               
35-362
               

               
Cow position:
               
chr11:44031640-44031974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 86
               

               
Conread position:
               
35-362
               

               
Cow position:
               
chr11:59872567-59872907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 86
               

               
Conread position:
               
35-365
               

               
Cow position:
               
chr11:42793319-42792993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
169, 65
               

               
Conread position:
               
35-366
               

               
Cow position:
               
chr11:18389220-18388892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
77, 128
               

               
Conread position:
               
36-346
               

               
Cow position:
               
chr11:10991908-10992236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
43, 318
               

               
Conread position:
               
36-347
               

               
Cow position:
               
chr11:38638767-38639069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 65
               

               
Conread position:
               
36-362
               

               
Cow position:
               
chr11:4412378-4412045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 80
               

               
Conread position:
               
36-366
               

               
Cow position:
               
chr11:30354704-30355039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
36-368
               

               
Cow position:
               
chr11:34615910-34616241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 85
               

               
Conread position:
               
37-262
               

               
Cow position:
               
chr11:67293987-67293763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
37-265
               

               
Cow position:
               
chr11:27666534-27666295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 45
               

               
Conread position:
               
37-297
               

               
Cow position:
               
chr11:18912906-18913163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
36, 69
               

               
Conread position:
               
37-308
               

               
Cow position:
               
chr11:17112984-17112714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 83
               

               
Conread position:
               
37-317
               

               
Cow position:
               
chr11:73478266-73478542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
166, 84
               

               
Conread position:
               
37-317
               

               
Cow position:
               
chr11:79019891-79019600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
46, 27
               

               
Conread position:
               
37-327
               

               
Cow position:
               
chr11:46413213-46413508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 121
               

               
Conread position:
               
39-317
               

               
Cow position:
               
chr11:64638878-64638606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 62
               

               
Conread position:
               
41-311
               

               
Cow position:
               
chr11:33294145-33293868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 80
               

               
Conread position:
               
41-371
               

               
Cow position:
               
chr11:46474045-46473697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
77, 251
               

               
Conread position:
               
41-374
               

               
Cow position:
               
chr11:80788264-80787918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 84
               

               
Conread position:
               
41-382
               

               
Cow position:
               
chr11:75480388-75480036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
44, 61
               

               
Conread position:
               
42-317
               

               
Cow position:
               
chr11:54333980-54334256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 206
               

               
Conread position:
               
42-318
               

               
Cow position:
               
chr11:82232071-82232339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
161, 73
               

               
Conread position:
               
42-351
               

               
Cow position:
               
chr11:16251606-16251289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 304
               

               
Conread position:
               
42-366
               

               
Cow position:
               
chr11:35874325-35874022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
42-372
               

               
Cow position:
               
chr11:26483369-26483699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 44
               

               
Conread position:
               
43-366
               

               
Cow position:
               
chr11:67951308-67950991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
160, 47
               

               
Conread position:
               
44-317
               

               
Cow position:
               
chr11:53925411-53925687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
158, 72
               

               
Conread position:
               
44-327
               

               
Cow position:
               
chr11:81614979-81614705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 64
               

               
Conread position:
               
46-351
               

               
Cow position:
               
chr11:47165482-47165179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
158, 61
               

               
Conread position:
               
47-273
               

               
Cow position:
               
chr11:18067188-18066966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
49-366
               

               
Cow position:
               
chr11:64090431-64090116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 62
               

               
Conread position:
               
50-365
               

               
Cow position:
               
chr11:63157252-63156932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 29
               

               
Conread position:
               
50-374
               

               
Cow position:
               
chr11:41812256-41811926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 71
               

               
Conread position:
               
51-315
               

               
Cow position:
               
chr11:70609446-70609707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
51-362
               

               
Cow position:
               
chr11:955021-955344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
97, 63
               

               
Conread position:
               
52-372
               

               
Cow position:
               
chr11:23232852-23232529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
152, 20
               

               
Conread position:
               
53-327
               

               
Cow position:
               
chr11:56518651-56518373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
151, 43
               

               
Conread position:
               
53-330
               

               
Cow position:
               
chr11:46451277-46451546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
151, 63
               

               
Conread position:
               
56-294
               

               
Cow position:
               
chr11:22978201-22977965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
62, 96
               

               
Conread position:
               
56-369
               

               
Cow position:
               
chr11:42003291-42002963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
149, 37
               

               
Conread position:
               
57-366
               

               
Cow position:
               
chr11:59156212-59155896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
60, 93
               

               
Conread position:
               
60-317
               

               
Cow position:
               
chr11:62490099-62490355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 61
               

               
Conread position:
               
60-364
               

               
Cow position:
               
chr11:35684833-35684522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 61
               

               
Conread position:
               
60-374
               

               
Cow position:
               
chr11:4435986-4436308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
53, 183
               

               
Conread position:
               
63-355
               

               
Cow position:
               
chr11:63847520-63847816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
142, 53
               

               
Conread position:
               
63-362
               

               
Cow position:
               
chr11:73924890-73924586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 51
               

               
Conread position:
               
63-362
               

               
Cow position:
               
chr11:86926253-86925961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 75
               

               
Conread position:
               
66-317
               

               
Cow position:
               
chr11:51044261-51044008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
137, 5
               

               
Conread position:
               
67-366
               

               
Cow position:
               
chr11:43913895-43914196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 54
               

               
Conread position:
               
71-327
               

               
Cow position:
               
chr11:68910176-68909916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 26
               

               
Conread position:
               
76-317
               

               
Cow position:
               
chr11:287652-287412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
67, 40
               

               
Conread position:
               
76-369
               

               
Cow position:
               
chr11:36848624-36848909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
197, 48
               

               
Conread position:
               
81-308
               

               
Cow position:
               
chr11:73474090-73473856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 83
               

               
Conread position:
               
81-317
               

               
Cow position:
               
chr11:9837414-9837177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
81-317
               

               
Cow position:
               
chr11:18698560-18698800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
119, 17
               

               
Conread position:
               
81-317
               

               
Cow position:
               
chr11:60302271-60302038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 40
               

               
Conread position:
               
81-317
               

               
Cow position:
               
chr11:80761690-80761456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
128, 20
               

               
Conread position:
               
81-345
               

               
Cow position:
               
chr11:4266351-4266090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
192, 35
               

               
Conread position:
               
82-307
               

               
Cow position:
               
chr11:62019913-62019680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
82-327
               

               
Cow position:
               
chr11:67931803-67931555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 29
               

               
Conread position:
               
83-355
               

               
Cow position:
               
chr11:7315436-7315161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
121, 15
               

               
Conread position:
               
85-376
               

               
Cow position:
               
chr11:25319742-25320034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
119, 5
               

               
Conread position:
               
87-306
               

               
Cow position:
               
chr11:36182381-36182598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
118, 34
               

               
Conread position:
               
87-372
               

               
Cow position:
               
chr11:25165134-25165421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
90-317
               

               
Cow position:
               
chr11:70272999-70273228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
114, 26
               

               
Conread position:
               
95-372
               

               
Cow position:
               
chr11:65857558-65857847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
96-309
               

               
Cow position:
               
chr11:65430766-65430974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
108, 20
               

               
Conread position:
               
97-317
               

               
Cow position:
               
chr11:62016568-62016353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
106, 15
               

               
Conread position:
               
98-365
               

               
Cow position:
               
chr11:85723405-85723677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 23
               

               
Conread position:
               
98-366
               

               
Cow position:
               
chr11:1485657-1485379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
106, 18
               

               
Conread position:
               
98-372
               

               
Cow position:
               
chr11:87155216-87155507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
100-298
               

               
Cow position:
               
chr11:28395151-28395346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 6
               

               
Conread position:
               
101-374
               

               
Cow position:
               
chr11:13190926-13191214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
102-273
               

               
Cow position:
               
chr11:56821548-56821375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
102-308
               

               
Cow position:
               
chr11:87169904-87169696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
90, 6
               

               
Conread position:
               
102-317
               

               
Cow position:
               
chr11:18572511-18572724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
103, 14
               

               
Conread position:
               
102-350
               

               
Cow position:
               
chr11:30720805-30721051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
101, 14
               

               
Conread position:
               
102-369
               

               
Cow position:
               
chr11:81143853-81143568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
105-306
               

               
Cow position:
               
chr11:8988519-8988317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
98, 15
               

               
Conread position:
               
105-374
               

               
Cow position:
               
chr11:36981278-36981552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
98, 16
               

               
Conread position:
               
105-374
               

               
Cow position:
               
chr11:70303797-70304060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
98, 16
               

               
Conread position:
               
107-369
               

               
Cow position:
               
chr11:71309819-71309553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
11, 234
               

               
Conread position:
               
108-316
               

               
Cow position:
               
chr11:83066207-83066416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
96, 102
               

               
Conread position:
               
108-317
               

               
Cow position:
               
chr11:38193863-38194077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
108-317
               

               
Cow position:
               
chr11:65827020-65826819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
167, 88
               

               
Conread position:
               
108-327
               

               
Cow position:
               
chr11:21844421-21844199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
97, 40
               

               
Conread position:
               
108-327
               

               
Cow position:
               
chr11:49148761-49148974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
96, 40
               

               
Conread position:
               
108-327
               

               
Cow position:
               
chr11:57111596-57111371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
89, 40
               

               
Conread position:
               
108-348
               

               
Cow position:
               
chr11:48932871-48932624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
96, 40
               

               
Conread position:
               
108-366
               

               
Cow position:
               
chr11:6234167-6233899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
108-366
               

               
Cow position:
               
chr11:20761557-20761828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
96, 40
               

               
Conread position:
               
108-371
               

               
Cow position:
               
chr11:74316418-74316703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
90, 40
               

               
Conread position:
               
109-317
               

               
Cow position:
               
chr11:30934142-30934347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
94, 25
               

               
Conread position:
               
109-327
               

               
Cow position:
               
chr11:48474421-48474639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
95, 75
               

               
Conread position:
               
111-308
               

               
Cow position:
               
chr11:58103060-58102857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
111-318
               

               
Cow position:
               
chr11:53719660-53719867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
93, 37
               

               
Conread position:
               
111-327
               

               
Cow position:
               
chr11:49935029-49934801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
111-366
               

               
Cow position:
               
chr11:11125377-11125644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
111-374
               

               
Cow position:
               
chr11:63518728-63518990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
11, 114
               

               
Conread position:
               
112-374
               

               
Cow position:
               
chr11:81300897-81300632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
91, 212
               

               
Conread position:
               
113-270
               

               
Cow position:
               
chr11:70205768-70205919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 21
               

               
Conread position:
               
114-290
               

               
Cow position:
               
chr11:75510515-75510336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
90, 45
               

               
Conread position:
               
115-366
               

               
Cow position:
               
chr11:77207767-77208023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
89, 155
               

               
Conread position:
               
116-316
               

               
Cow position:
               
chr11:10127894-10127701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 43
               

               
Conread position:
               
116-351
               

               
Cow position:
               
chr11:2788099-2788346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
116-366
               

               
Cow position:
               
chr11:73354336-73354079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
117-294
               

               
Cow position:
               
chr11:3282779-3282951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
117-307
               

               
Cow position:
               
chr11:10620605-10620412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
81, 75
               

               
Conread position:
               
117-308
               

               
Cow position:
               
chr11:8828908-8828716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
86, 168
               

               
Conread position:
               
117-309
               

               
Cow position:
               
chr11:83043640-83043449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
87, 115
               

               
Conread position:
               
117-317
               

               
Cow position:
               
chr11:19508017-19508218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
117-317
               

               
Cow position:
               
chr11:38010091-38009888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
87, 153
               

               
Conread position:
               
117-327
               

               
Cow position:
               
chr11:18484439-18484236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
86, 102
               

               
Conread position:
               
117-348
               

               
Cow position:
               
chr11:40258677-40258447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
87, 35
               

               
Conread position:
               
117-364
               

               
Cow position:
               
chr11:1668395-1668648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
39, 147
               

               
Conread position:
               
117-364
               

               
Cow position:
               
chr11:46580087-46580336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 93
               

               
Conread position:
               
118-317
               

               
Cow position:
               
chr11:1362759-1362553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
118-317
               

               
Cow position:
               
chr11:75748157-75748356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
86, 30
               

               
Conread position:
               
118-327
               

               
Cow position:
               
chr11:30475721-30475938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
86, 30
               

               
Conread position:
               
118-347
               

               
Cow position:
               
chr11:45646869-45646637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
86, 30
               

               
Conread position:
               
119-319
               

               
Cow position:
               
chr11:73977501-73977313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
120-317
               

               
Cow position:
               
chr11:48697171-48697370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
84, 188
               

               
Conread position:
               
121-300
               

               
Cow position:
               
chr11:5790191-5790008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 153
               

               
Conread position:
               
121-350
               

               
Cow position:
               
chr11:11232730-11232497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
28, 218
               

               
Conread position:
               
121-366
               

               
Cow position:
               
chr11:36659090-36658838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 98
               

               
Conread position:
               
122-317
               

               
Cow position:
               
chr11:8105508-8105705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
123-306
               

               
Cow position:
               
chr11:17227913-17227734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
152, 77
               

               
Conread position:
               
123-316
               

               
Cow position:
               
chr11:45632038-45631840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
81, 151
               

               
Conread position:
               
123-317
               

               
Cow position:
               
chr11:48232469-48232656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
145, 89
               

               
Conread position:
               
123-317
               

               
Cow position:
               
chr11:62155357-62155549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 25
               

               
Conread position:
               
123-327
               

               
Cow position:
               
chr11:75355336-75355544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
123-356
               

               
Cow position:
               
chr11:18210622-18210377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
81, 151
               

               
Conread position:
               
123-365
               

               
Cow position:
               
chr11:79728947-79728690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
124-317
               

               
Cow position:
               
chr11:32071877-32072072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 24
               

               
Conread position:
               
124-328
               

               
Cow position:
               
chr11:12555690-12555474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
124-366
               

               
Cow position:
               
chr11:83230657-83230419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 23
               

               
Conread position:
               
125-317
               

               
Cow position:
               
chr11:377922-377721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
125-317
               

               
Cow position:
               
chr11:50951279-50951477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
125-351
               

               
Cow position:
               
chr11:71455516-71455755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
125-374
               

               
Cow position:
               
chr11:50778098-50778358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
24, 151
               

               
Conread position:
               
126-372
               

               
Cow position:
               
chr11:19247466-19247212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
17, 135
               

               
Conread position:
               
127-317
               

               
Cow position:
               
chr11:36496584-36496766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
127-366
               

               
Cow position:
               
chr11:45898325-45898073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
22, 45
               

               
Conread position:
               
127-373
               

               
Cow position:
               
chr11:59370745-59371002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 133
               

               
Conread position:
               
128-308
               

               
Cow position:
               
chr11:84924364-84924180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
75, 20
               

               
Conread position:
               
128-327
               

               
Cow position:
               
chr11:34032464-34032266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
75, 24
               

               
Conread position:
               
131-327
               

               
Cow position:
               
chr11:62045133-62045332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
74, 102
               

               
Conread position:
               
131-362
               

               
Cow position:
               
chr11:36799561-36799330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
74, 17
               

               
Conread position:
               
132-308
               

               
Cow position:
               
chr11:17192546-17192368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
72, 142
               

               
Conread position:
               
132-308
               

               
Cow position:
               
chr11:34120929-34121114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 146
               

               
Conread position:
               
132-316
               

               
Cow position:
               
chr11:63482690-63482504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
132-317
               

               
Cow position:
               
chr11:47544863-47545053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
132-356
               

               
Cow position:
               
chr11:27746653-27746894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
27, 132
               

               
Conread position:
               
134-282
               

               
Cow position:
               
chr11:21922213-21922362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
70, 43
               

               
Conread position:
               
134-297
               

               
Cow position:
               
chr11:31227732-31227891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 88
               

               
Conread position:
               
134-317
               

               
Cow position:
               
chr11:30764217-30764408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
135-319
               

               
Cow position:
               
chr11:83397643-83397829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
127, 64
               

               
Conread position:
               
136-317
               

               
Cow position:
               
chr11:31525604-31525792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
67, 50
               

               
Conread position:
               
136-317
               

               
Cow position:
               
chr11:70651705-70651524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 26
               

               
Conread position:
               
137-317
               

               
Cow position:
               
chr11:63516563-63516749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
138-317
               

               
Cow position:
               
chr11:56728688-56728871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
65, 143
               

               
Conread position:
               
138-327
               

               
Cow position:
               
chr11:36647102-36647293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
66, 127
               

               
Conread position:
               
138-358
               

               
Cow position:
               
chr11:41426655-41426880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
139-346
               

               
Cow position:
               
chr11:77128411-77128611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
126, 58
               

               
Conread position:
               
139-373
               

               
Cow position:
               
chr11:45872576-45872334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
65, 197
               

               
Conread position:
               
140-372
               

               
Cow position:
               
chr11:30639204-30638963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
143-308
               

               
Cow position:
               
chr11:48544190-48544351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 16
               

               
Conread position:
               
144-317
               

               
Cow position:
               
chr11:63520520-63520695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
144-327
               

               
Cow position:
               
chr11:81281692-81281883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
59, 130
               

               
Conread position:
               
144-375
               

               
Cow position:
               
chr11:3726033-3726278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
145-366
               

               
Cow position:
               
chr11:2917831-2917605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
130, 60
               

               
Conread position:
               
145-375
               

               
Cow position:
               
chr11:20238421-20238666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 89
               

               
Conread position:
               
147-317
               

               
Cow position:
               
chr11:2083898-2084064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
118, 57
               

               
Conread position:
               
149-366
               

               
Cow position:
               
chr11:2907773-2907542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
31, 203
               

               
Conread position:
               
151-361
               

               
Cow position:
               
chr11:47899031-47899244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
53, 167
               

               
Conread position:
               
153-366
               

               
Cow position:
               
chr11:62808892-62808671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
153-376
               

               
Cow position:
               
chr11:41438468-41438232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
50, 213
               

               
Conread position:
               
154-314
               

               
Cow position:
               
chr11:57725071-57724903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
154-317
               

               
Cow position:
               
chr11:82940860-82940699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
63, 46
               

               
Conread position:
               
157-327
               

               
Cow position:
               
chr11:62239510-62239679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
127, 32
               

               
Conread position:
               
160-317
               

               
Cow position:
               
chr11:65762833-65762677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 58
               

               
Conread position:
               
162-317
               

               
Cow position:
               
chr11:18341273-18341118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 110
               

               
Conread position:
               
162-362
               

               
Cow position:
               
chr11:11469868-11469671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 95
               

               
Conread position:
               
164-327
               

               
Cow position:
               
chr11:6329013-6329185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
164-347
               

               
Cow position:
               
chr11:2514825-2514636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
164-366
               

               
Cow position:
               
chr11:33348417-33348206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 195
               

               
Conread position:
               
165-308
               

               
Cow position:
               
chr11:21728499-21728355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
166-317
               

               
Cow position:
               
chr11:51293640-51293490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
168-366
               

               
Cow position:
               
chr11:18591662-18591453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
174-362
               

               
Cow position:
               
chr11:17660872-17661067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
178-366
               

               
Cow position:
               
chr11:36301299-36301097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
179-374
               

               
Cow position:
               
chr11:40860934-40860725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
180-325
               

               
Cow position:
               
chr11:34145133-34144981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 81
               

               
Conread position:
               
182-317
               

               
Cow position:
               
chr11:38874617-38874480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
186-366
               

               
Cow position:
               
chr11:36286488-36286676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
18, 47
               

               
Conread position:
               
206-366
               

               
Cow position:
               
chr11:71493046-71492879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
207-375
               

               
Cow position:
               
chr11:36672235-36672054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
209-356
               

               
Cow position:
               
chr11:30954813-30954966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
211-317
               

               
Cow position:
               
chr11:61958930-61958822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
211-366
               

               
Cow position:
               
chr11:16907227-16907068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
225-374
               

               
Cow position:
               
chr11:66289390-66289540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
35, 97
               

               
Conread position:
               
226-374
               

               
Cow position:
               
chr11:33468543-33468699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               
Show alignments to all cow chromosomes.