Cow genome map
| Conread name: | Lym1-jns19bF07.f |
| Conread position: | 1-304 |
| Cow position: | chr12:7977639-7977932 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 71 |
| Conread position: | 1-306 |
| Cow position: | chr12:27055192-27055502 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 10, 112 |
| Conread position: | 1-316 |
| Cow position: | chr12:32786395-32786097 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 272, 40 |
| Conread position: | 1-317 |
| Cow position: | chr12:19155021-19154713 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 97 |
| Conread position: | 1-317 |
| Cow position: | chr12:27563791-27563475 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 121 |
| Conread position: | 1-317 |
| Cow position: | chr12:27803458-27803150 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 11, 102 |
| Conread position: | 1-317 |
| Cow position: | chr12:44274258-44273939 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 21, 101 |
| Conread position: | 1-358 |
| Cow position: | chr12:5800619-5800981 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 114 |
| Conread position: | 1-362 |
| Cow position: | chr12:17716665-17717026 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 10, 217 |
| Conread position: | 1-362 |
| Cow position: | chr12:37770457-37770833 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 125 |
| Conread position: | 1-362 |
| Cow position: | chr12:38010468-38010112 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 10, 155 |
| Conread position: | 1-365 |
| Cow position: | chr12:35718466-35718118 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 203, 9 |
| Conread position: | 1-365 |
| Cow position: | chr12:42602650-42602284 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 114 |
| Conread position: | 1-366 |
| Cow position: | chr12:42966587-42966960 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 121 |
| Conread position: | 1-367 |
| Cow position: | chr12:6489387-6489027 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 271 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 10, 98 |
| Conread position: | 1-372 |
| Cow position: | chr12:22047072-22047436 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 267 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 10, 101 |
| Conread position: | 1-372 |
| Cow position: | chr12:36501360-36500982 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 115 |
| Conread position: | 1-374 |
| Cow position: | chr12:19865828-19866207 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 121 |
| Conread position: | 2-259 |
| Cow position: | chr12:3600306-3600052 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 9, 94 |
| Conread position: | 2-307 |
| Cow position: | chr12:42181549-42181246 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 9 |
| Conread position: | 2-309 |
| Cow position: | chr12:3578872-3579178 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 221 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 26, 16 |
| Conread position: | 2-315 |
| Cow position: | chr12:2242302-2241984 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 215 |
| Conread position: | 2-317 |
| Cow position: | chr12:7310997-7311298 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 166, 9 |
| Conread position: | 2-317 |
| Cow position: | chr12:11835835-11836133 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 223 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 273, 103 |
| Conread position: | 2-317 |
| Cow position: | chr12:35218812-35218502 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 8 |
| Conread position: | 2-317 |
| Cow position: | chr12:40158647-40158336 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 8 |
| Conread position: | 2-358 |
| Cow position: | chr12:18421337-18420980 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 9 |
| Conread position: | 3-351 |
| Cow position: | chr12:6210578-6210221 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 69 |
| Conread position: | 6-317 |
| Cow position: | chr12:20326366-20326676 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 68 |
| Conread position: | 10-261 |
| Cow position: | chr12:18944052-18943800 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 135, 26 |
| Conread position: | 10-301 |
| Cow position: | chr12:4593691-4593990 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 161, 111 |
| Conread position: | 10-308 |
| Cow position: | chr12:3211917-3212221 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 54, 71 |
| Conread position: | 10-317 |
| Cow position: | chr12:26869199-26868892 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 13 |
| Conread position: | 10-327 |
| Cow position: | chr12:42254257-42254582 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 202, 91 |
| Conread position: | 10-347 |
| Cow position: | chr12:29484291-29483955 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 8 |
| Conread position: | 10-351 |
| Cow position: | chr12:24755428-24755094 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 194, 104 |
| Conread position: | 10-356 |
| Cow position: | chr12:27505802-27505455 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 131, 106 |
| Conread position: | 10-373 |
| Cow position: | chr12:35311077-35310718 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 111 |
| Conread position: | 11-327 |
| Cow position: | chr12:6240904-6241226 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 254 |
| Conread position: | 12-365 |
| Cow position: | chr12:7001006-7000644 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 107, 149 |
| Conread position: | 18-294 |
| Cow position: | chr12:37123120-37123390 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 11 |
| Conread position: | 18-317 |
| Cow position: | chr12:17472612-17472324 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 187, 77 |
| Conread position: | 18-317 |
| Cow position: | chr12:19869076-19869371 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 73 |
| Conread position: | 18-317 |
| Cow position: | chr12:30753330-30753625 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 222 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 81, 99 |
| Conread position: | 18-317 |
| Cow position: | chr12:31429952-31429668 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 18-327 |
| Cow position: | chr12:19872045-19872342 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 239, 83 |
| Conread position: | 18-358 |
| Cow position: | chr12:19508965-19508625 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 83 |
| Conread position: | 18-368 |
| Cow position: | chr12:17079865-17080209 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 79 |
| Conread position: | 18-374 |
| Cow position: | chr12:16359478-16359832 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 103 |
| Conread position: | 22-264 |
| Cow position: | chr12:794150-794399 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 25-278 |
| Cow position: | chr12:29762998-29762731 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 85, 134 |
| Conread position: | 25-308 |
| Cow position: | chr12:18550507-18550775 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 25-308 |
| Cow position: | chr12:45555806-45555521 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 147, 85 |
| Conread position: | 25-317 |
| Cow position: | chr12:34473989-34473722 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 250, 43 |
| Conread position: | 25-327 |
| Cow position: | chr12:36568436-36568145 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 178, 69 |
| Conread position: | 25-351 |
| Cow position: | chr12:19040006-19039669 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 127 |
| Conread position: | 25-367 |
| Cow position: | chr12:17031217-17031577 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 259 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 83, 46 |
| Conread position: | 26-351 |
| Cow position: | chr12:40910678-40910348 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 90 |
| Conread position: | 33-317 |
| Cow position: | chr12:6227012-6226748 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 171, 88 |
| Conread position: | 35-309 |
| Cow position: | chr12:6719945-6720217 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 169, 55 |
| Conread position: | 35-316 |
| Cow position: | chr12:28011278-28010998 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 76 |
| Conread position: | 35-317 |
| Cow position: | chr12:3568571-3568847 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 168, 66 |
| Conread position: | 35-317 |
| Cow position: | chr12:15173440-15173727 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 221 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 221, 81 |
| Conread position: | 35-323 |
| Cow position: | chr12:5863200-5863475 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 75, 54 |
| Conread position: | 35-351 |
| Cow position: | chr12:25560992-25561311 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 86 |
| Conread position: | 36-366 |
| Cow position: | chr12:17000884-17001218 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 168, 74 |
| Conread position: | 37-362 |
| Cow position: | chr12:4008658-4008327 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 50 |
| Conread position: | 37-372 |
| Cow position: | chr12:21393321-21393672 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 247 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 113, 84 |
| Conread position: | 40-361 |
| Cow position: | chr12:19691606-19691284 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 239 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 149, 61 |
| Conread position: | 41-304 |
| Cow position: | chr12:1883880-1883613 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 108, 86 |
| Conread position: | 41-344 |
| Cow position: | chr12:10895921-10895622 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 75 |
| Conread position: | 41-366 |
| Cow position: | chr12:30170289-30170629 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 42-318 |
| Cow position: | chr12:41083680-41083972 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 215 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 74, 124 |
| Conread position: | 43-366 |
| Cow position: | chr12:9143021-9143347 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 242 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 106, 73 |
| Conread position: | 45-366 |
| Cow position: | chr12:33323867-33323536 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 239 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 11, 16 |
| Conread position: | 46-366 |
| Cow position: | chr12:41580749-41581074 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 158, 75 |
| Conread position: | 49-317 |
| Cow position: | chr12:44596179-44595909 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 101, 72 |
| Conread position: | 49-366 |
| Cow position: | chr12:17881507-17881821 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 164, 67 |
| Conread position: | 50-327 |
| Cow position: | chr12:15938628-15938351 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 216 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 218, 51 |
| Conread position: | 51-366 |
| Cow position: | chr12:24032644-24032965 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 230 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 152, 24 |
| Conread position: | 54-300 |
| Cow position: | chr12:17270191-17270431 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 160, 59 |
| Conread position: | 55-317 |
| Cow position: | chr12:18937030-18937303 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 209 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 149, 24 |
| Conread position: | 60-265 |
| Cow position: | chr12:27039117-27038915 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 144, 47 |
| Conread position: | 61-327 |
| Cow position: | chr12:18020499-18020771 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 82, 59 |
| Conread position: | 62-362 |
| Cow position: | chr12:18577494-18577795 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 88 |
| Conread position: | 64-327 |
| Cow position: | chr12:18076186-18076449 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 203 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 141, 42 |
| Conread position: | 66-317 |
| Cow position: | chr12:9710553-9710307 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 202, 48 |
| Conread position: | 68-317 |
| Cow position: | chr12:34006950-34007207 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 80-317 |
| Cow position: | chr12:22261148-22260922 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 78, 41 |
| Conread position: | 81-308 |
| Cow position: | chr12:16851341-16851116 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 123, 43 |
| Conread position: | 83-317 |
| Cow position: | chr12:34385845-34385611 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 38 |
| Conread position: | 87-314 |
| Cow position: | chr12:34148678-34148450 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 146, 34 |
| Conread position: | 88-305 |
| Cow position: | chr12:9229810-9229592 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 116, 182 |
| Conread position: | 94-262 |
| Cow position: | chr12:7055605-7055441 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 110, 21 |
| Conread position: | 94-365 |
| Cow position: | chr12:44622037-44622306 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 180, 110 |
| Conread position: | 99-308 |
| Cow position: | chr12:26782566-26782781 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 104, 22 |
| Conread position: | 99-309 |
| Cow position: | chr12:30745398-30745609 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 167 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 105, 22 |
| Conread position: | 99-362 |
| Cow position: | chr12:35771348-35771065 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 48, 12 |
| Conread position: | 102-317 |
| Cow position: | chr12:8869197-8868975 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 6, 27 |
| Conread position: | 102-317 |
| Cow position: | chr12:29995774-29995558 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 64, 14 |
| Conread position: | 102-360 |
| Cow position: | chr12:11056564-11056829 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 102, 12 |
| Conread position: | 103-317 |
| Cow position: | chr12:30805541-30805756 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 5, 110 |
| Conread position: | 103-375 |
| Cow position: | chr12:30728551-30728277 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 104-363 |
| Cow position: | chr12:18518361-18518618 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 160, 17 |
| Conread position: | 107-317 |
| Cow position: | chr12:33457843-33458047 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 96, 14 |
| Conread position: | 107-371 |
| Cow position: | chr12:20479621-20479366 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 97, 40 |
| Conread position: | 108-317 |
| Cow position: | chr12:1848846-1848632 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 96, 170 |
| Conread position: | 108-317 |
| Cow position: | chr12:27563141-27562927 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 96, 26 |
| Conread position: | 108-372 |
| Cow position: | chr12:8943528-8943258 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 97, 78 |
| Conread position: | 109-309 |
| Cow position: | chr12:6687562-6687756 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 37, 104 |
| Conread position: | 110-366 |
| Cow position: | chr12:6411034-6410775 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 201 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 95, 122 |
| Conread position: | 111-314 |
| Cow position: | chr12:40307391-40307597 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 111-372 |
| Cow position: | chr12:46635250-46634990 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 93, 209 |
| Conread position: | 112-374 |
| Cow position: | chr12:3076929-3076659 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 211 |
| Conread position: | 113-317 |
| Cow position: | chr12:3510262-3510469 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 166 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 92, 36 |
| Conread position: | 113-368 |
| Cow position: | chr12:25619680-25619420 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 91, 36 |
| Conread position: | 116-305 |
| Cow position: | chr12:14132044-14131848 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 116-366 |
| Cow position: | chr12:4866516-4866777 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 88, 31 |
| Conread position: | 116-371 |
| Cow position: | chr12:42167346-42167609 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 88, 32 |
| Conread position: | 116-374 |
| Cow position: | chr12:36954675-36954413 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 88, 225 |
| Conread position: | 117-366 |
| Cow position: | chr12:28582791-28582544 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 200, 83 |
| Conread position: | 118-306 |
| Cow position: | chr12:25805408-25805219 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 118-317 |
| Cow position: | chr12:40270384-40270190 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 86, 78 |
| Conread position: | 118-346 |
| Cow position: | chr12:29694335-29694109 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 148, 33 |
| Conread position: | 118-366 |
| Cow position: | chr12:5714331-5714590 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 85, 30 |
| Conread position: | 119-300 |
| Cow position: | chr12:16605943-16605767 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 85, 108 |
| Conread position: | 119-317 |
| Cow position: | chr12:19715324-19715138 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 85, 29 |
| Conread position: | 119-327 |
| Cow position: | chr12:22881755-22881969 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 108, 29 |
| Conread position: | 119-355 |
| Cow position: | chr12:5905760-5906000 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 86, 127 |
| Conread position: | 120-317 |
| Cow position: | chr12:25455818-25456021 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 160 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 120-328 |
| Cow position: | chr12:41091233-41091446 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 84, 197 |
| Conread position: | 123-263 |
| Cow position: | chr12:20795614-20795755 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 123-348 |
| Cow position: | chr12:32391552-32391790 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 82, 141 |
| Conread position: | 124-356 |
| Cow position: | chr12:11109478-11109713 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 82, 16 |
| Conread position: | 125-280 |
| Cow position: | chr12:3093285-3093126 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 24, 88 |
| Conread position: | 127-327 |
| Cow position: | chr12:40110100-40110298 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 77, 92 |
| Conread position: | 129-308 |
| Cow position: | chr12:23154753-23154569 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 74, 19 |
| Conread position: | 129-317 |
| Cow position: | chr12:941345-941539 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 129-317 |
| Cow position: | chr12:12178634-12178824 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 75, 130 |
| Conread position: | 131-317 |
| Cow position: | chr12:41214603-41214422 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 73, 17 |
| Conread position: | 132-362 |
| Cow position: | chr12:18388566-18388334 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 71, 175 |
| Conread position: | 132-366 |
| Cow position: | chr12:19502704-19502468 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 72, 183 |
| Conread position: | 134-366 |
| Cow position: | chr12:42698506-42698275 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 15, 128 |
| Conread position: | 135-317 |
| Cow position: | chr12:25320642-25320824 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 69, 98 |
| Conread position: | 138-317 |
| Cow position: | chr12:44846115-44846291 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 58, 78 |
| Conread position: | 138-362 |
| Cow position: | chr12:42879429-42879650 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 182, 11 |
| Conread position: | 139-365 |
| Cow position: | chr12:12700052-12699805 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 140-375 |
| Cow position: | chr12:30662226-30661981 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 143-366 |
| Cow position: | chr12:39465305-39465539 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 61, 172 |
| Conread position: | 144-307 |
| Cow position: | chr12:31841165-31841334 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 145-368 |
| Cow position: | chr12:8710560-8710784 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 59, 92 |
| Conread position: | 147-351 |
| Cow position: | chr12:17702502-17702285 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 152-317 |
| Cow position: | chr12:24107802-24107643 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 111 |
| Conread position: | 153-327 |
| Cow position: | chr12:3994686-3994871 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 154-316 |
| Cow position: | chr12:29162073-29161912 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 50, 79 |
| Conread position: | 155-372 |
| Cow position: | chr12:4182957-4182725 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 156-317 |
| Cow position: | chr12:5635708-5635545 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 48, 115 |
| Conread position: | 156-347 |
| Cow position: | chr12:46673489-46673295 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 48, 13 |
| Conread position: | 156-371 |
| Cow position: | chr12:5940083-5940305 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 42, 180 |
| Conread position: | 159-362 |
| Cow position: | chr12:15240981-15240782 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 45, 126 |
| Conread position: | 163-372 |
| Cow position: | chr12:23797850-23798067 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 110 |
| Conread position: | 163-372 |
| Cow position: | chr12:35780180-35779959 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 40, 108 |
| Conread position: | 164-316 |
| Cow position: | chr12:28213266-28213419 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 40, 106 |
| Conread position: | 168-327 |
| Cow position: | chr12:18766229-18766063 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 36, 73 |
| Conread position: | 172-366 |
| Cow position: | chr12:29770817-29770612 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 180-317 |
| Cow position: | chr12:15162914-15163052 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
Show alignments to all cow chromosomes.