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Cow genome map

           
Conread name:
           
Lym1-jns19bF07.f
        

               
Conread position:
               
1-302
               

               
Cow position:
               
chr14:39003611-39003307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr14:41325020-41325326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
10, 120
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr14:19222300-19221983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 123
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr14:38549218-38548894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
199, 36
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr14:50027625-50027322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
35, 102
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr14:6735452-6735770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr14:12483892-12484211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 148
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr14:25779514-25779186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 26
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr14:21285041-21284685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 55
               

               
Conread position:
               
1-364
               

               
Cow position:
               
chr14:44741967-44742335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 122
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr14:35650783-35651155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 170
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr14:22982304-22982044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
147, 9
               

               
Conread position:
               
2-270
               

               
Cow position:
               
chr14:19512972-19513227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
202, 9
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr14:28708445-28708142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
9, 122
               

               
Conread position:
               
2-306
               

               
Cow position:
               
chr14:42596793-42596490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 7
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr14:34221470-34221169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
202, 8
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr14:13810373-13810039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
73, 7
               

               
Conread position:
               
2-318
               

               
Cow position:
               
chr14:27848616-27848299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 9
               

               
Conread position:
               
2-348
               

               
Cow position:
               
chr14:40737246-40737596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
2-365
               

               
Cow position:
               
chr14:24417300-24416935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 8
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr14:6418899-6419258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 7
               

               
Conread position:
               
2-368
               

               
Cow position:
               
chr14:47584233-47584615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 8
               

               
Conread position:
               
2-372
               

               
Cow position:
               
chr14:24894173-24893808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 9
               

               
Conread position:
               
3-366
               

               
Cow position:
               
chr14:20600798-20600431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
10-254
               

               
Cow position:
               
chr14:34395262-34395502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
195, 102
               

               
Conread position:
               
10-280
               

               
Cow position:
               
chr14:44294127-44294401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
181, 105
               

               
Conread position:
               
10-297
               

               
Cow position:
               
chr14:21534638-21534913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
195, 91
               

               
Conread position:
               
10-306
               

               
Cow position:
               
chr14:26449154-26448864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
195, 88
               

               
Conread position:
               
10-309
               

               
Cow position:
               
chr14:42918507-42918199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
105, 83
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr14:6599544-6599851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 89
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr14:31734447-31734750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 92
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr14:38295883-38296179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
194, 69
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr14:44237291-44237604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 111
               

               
Conread position:
               
10-327
               

               
Cow position:
               
chr14:19863039-19863344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
194, 66
               

               
Conread position:
               
10-327
               

               
Cow position:
               
chr14:35381993-35381679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
194, 66
               

               
Conread position:
               
10-327
               

               
Cow position:
               
chr14:41756667-41756348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 66
               

               
Conread position:
               
10-350
               

               
Cow position:
               
chr14:9020431-9020090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
132, 61
               

               
Conread position:
               
10-350
               

               
Cow position:
               
chr14:33538520-33538861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 111
               

               
Conread position:
               
10-356
               

               
Cow position:
               
chr14:1727655-1728007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
193, 111
               

               
Conread position:
               
10-366
               

               
Cow position:
               
chr14:14621777-14622134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 111
               

               
Conread position:
               
10-366
               

               
Cow position:
               
chr14:33325986-33326351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 111
               

               
Conread position:
               
10-374
               

               
Cow position:
               
chr14:41479250-41479626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 111
               

               
Conread position:
               
10-374
               

               
Cow position:
               
chr14:43249993-43249624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 111
               

               
Conread position:
               
10-376
               

               
Cow position:
               
chr14:40230228-40230593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 111
               

               
Conread position:
               
11-302
               

               
Cow position:
               
chr14:27865730-27866021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
193, 94
               

               
Conread position:
               
11-327
               

               
Cow position:
               
chr14:28378769-28378449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 90
               

               
Conread position:
               
12-264
               

               
Cow position:
               
chr14:14419888-14419639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
192, 29
               

               
Conread position:
               
12-327
               

               
Cow position:
               
chr14:45605496-45605180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 104
               

               
Conread position:
               
14-365
               

               
Cow position:
               
chr14:20016302-20016662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 72
               

               
Conread position:
               
15-366
               

               
Cow position:
               
chr14:41471566-41471925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
250, 106
               

               
Conread position:
               
18-304
               

               
Cow position:
               
chr14:34021086-34020801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
131, 83
               

               
Conread position:
               
18-317
               

               
Cow position:
               
chr14:25403546-25403836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 39
               

               
Conread position:
               
18-326
               

               
Cow position:
               
chr14:12243987-12244292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
187, 63
               

               
Conread position:
               
18-327
               

               
Cow position:
               
chr14:22583539-22583236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
18-327
               

               
Cow position:
               
chr14:46735717-46735393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 50
               

               
Conread position:
               
18-374
               

               
Cow position:
               
chr14:20009917-20010275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
186, 87
               

               
Conread position:
               
18-374
               

               
Cow position:
               
chr14:21201428-21201788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 104
               

               
Conread position:
               
18-376
               

               
Cow position:
               
chr14:8754724-8754366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 37
               

               
Conread position:
               
19-317
               

               
Cow position:
               
chr14:49563270-49563558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
12, 91
               

               
Conread position:
               
24-368
               

               
Cow position:
               
chr14:6490307-6490657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
25-264
               

               
Cow position:
               
chr14:45583806-45584045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
122, 84
               

               
Conread position:
               
25-265
               

               
Cow position:
               
chr14:19979635-19979874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
179, 92
               

               
Conread position:
               
25-309
               

               
Cow position:
               
chr14:20640227-20640517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 96
               

               
Conread position:
               
25-351
               

               
Cow position:
               
chr14:42154568-42154900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 49
               

               
Conread position:
               
25-366
               

               
Cow position:
               
chr14:8784569-8784240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 96
               

               
Conread position:
               
25-374
               

               
Cow position:
               
chr14:13385767-13385404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 91
               

               
Conread position:
               
25-382
               

               
Cow position:
               
chr14:17899866-17899522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
233, 93
               

               
Conread position:
               
26-317
               

               
Cow position:
               
chr14:26116456-26116162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 95
               

               
Conread position:
               
27-265
               

               
Cow position:
               
chr14:37151247-37151497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
18, 86
               

               
Conread position:
               
27-367
               

               
Cow position:
               
chr14:29772161-29771816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
198, 94
               

               
Conread position:
               
27-374
               

               
Cow position:
               
chr14:35420368-35420728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 76
               

               
Conread position:
               
31-301
               

               
Cow position:
               
chr14:8964936-8964658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
65, 87
               

               
Conread position:
               
34-317
               

               
Cow position:
               
chr14:20712297-20712588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 87
               

               
Conread position:
               
35-281
               

               
Cow position:
               
chr14:41180337-41180560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
35-307
               

               
Cow position:
               
chr14:42330736-42330464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 37
               

               
Conread position:
               
35-308
               

               
Cow position:
               
chr14:12546205-12546475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
169, 81
               

               
Conread position:
               
35-308
               

               
Cow position:
               
chr14:20666641-20666913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
169, 86
               

               
Conread position:
               
35-317
               

               
Cow position:
               
chr14:8102160-8101892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
35-317
               

               
Cow position:
               
chr14:24992196-24991924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 86
               

               
Conread position:
               
35-317
               

               
Cow position:
               
chr14:25385509-25385784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
35-317
               

               
Cow position:
               
chr14:38921317-38921051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 52
               

               
Conread position:
               
35-317
               

               
Cow position:
               
chr14:39519091-39518796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 98
               

               
Conread position:
               
35-317
               

               
Cow position:
               
chr14:43046525-43046250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
114, 61
               

               
Conread position:
               
35-317
               

               
Cow position:
               
chr14:48492401-48492688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 86
               

               
Conread position:
               
35-327
               

               
Cow position:
               
chr14:10912599-10912876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
168, 81
               

               
Conread position:
               
35-359
               

               
Cow position:
               
chr14:41211253-41210908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
35-362
               

               
Cow position:
               
chr14:34199459-34199795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 56
               

               
Conread position:
               
35-366
               

               
Cow position:
               
chr14:33828528-33828206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 66
               

               
Conread position:
               
35-374
               

               
Cow position:
               
chr14:106192-106531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 51
               

               
Conread position:
               
36-309
               

               
Cow position:
               
chr14:37640615-37640345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 85
               

               
Conread position:
               
36-327
               

               
Cow position:
               
chr14:10907102-10906804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
168, 143
               

               
Conread position:
               
36-362
               

               
Cow position:
               
chr14:27591566-27591909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
106, 65
               

               
Conread position:
               
36-374
               

               
Cow position:
               
chr14:8989211-8989540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
111, 80
               

               
Conread position:
               
37-317
               

               
Cow position:
               
chr14:19957527-19957806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
167, 231
               

               
Conread position:
               
37-372
               

               
Cow position:
               
chr14:43452799-43453142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
166, 14
               

               
Conread position:
               
38-308
               

               
Cow position:
               
chr14:1706657-1706384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
166, 83
               

               
Conread position:
               
40-317
               

               
Cow position:
               
chr14:24581314-24581027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 118
               

               
Conread position:
               
41-262
               

               
Cow position:
               
chr14:25993314-25993533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
151, 40
               

               
Conread position:
               
41-317
               

               
Cow position:
               
chr14:21018490-21018214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
163, 19
               

               
Conread position:
               
41-374
               

               
Cow position:
               
chr14:20467735-20468059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
162, 80
               

               
Conread position:
               
42-273
               

               
Cow position:
               
chr14:16525252-16525022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
164, 37
               

               
Conread position:
               
42-308
               

               
Cow position:
               
chr14:9029306-9029566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
101, 79
               

               
Conread position:
               
50-317
               

               
Cow position:
               
chr14:18308941-18309195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
84, 71
               

               
Conread position:
               
50-369
               

               
Cow position:
               
chr14:34082790-34083101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 51
               

               
Conread position:
               
51-327
               

               
Cow position:
               
chr14:39926555-39926292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
13, 62
               

               
Conread position:
               
53-325
               

               
Cow position:
               
chr14:7317202-7316918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 68
               

               
Conread position:
               
53-340
               

               
Cow position:
               
chr14:17013874-17013579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 68
               

               
Conread position:
               
54-351
               

               
Cow position:
               
chr14:48427441-48427134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 67
               

               
Conread position:
               
56-367
               

               
Cow position:
               
chr14:39769860-39770191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
54, 98
               

               
Conread position:
               
57-360
               

               
Cow position:
               
chr14:19633542-19633234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 60
               

               
Conread position:
               
58-317
               

               
Cow position:
               
chr14:46965921-46965661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 90
               

               
Conread position:
               
60-374
               

               
Cow position:
               
chr14:41809293-41809619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 56
               

               
Conread position:
               
67-308
               

               
Cow position:
               
chr14:19207216-19206969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
136, 54
               

               
Conread position:
               
71-362
               

               
Cow position:
               
chr14:40433270-40432973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 26
               

               
Conread position:
               
71-367
               

               
Cow position:
               
chr14:7291139-7290842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
134, 24
               

               
Conread position:
               
72-363
               

               
Cow position:
               
chr14:25695727-25695431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 39
               

               
Conread position:
               
81-362
               

               
Cow position:
               
chr14:18345396-18345684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
123, 15
               

               
Conread position:
               
86-317
               

               
Cow position:
               
chr14:37934277-37934513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
47, 20
               

               
Conread position:
               
90-317
               

               
Cow position:
               
chr14:11641247-11641468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
113, 26
               

               
Conread position:
               
92-351
               

               
Cow position:
               
chr14:47027048-47027306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
86, 121
               

               
Conread position:
               
93-319
               

               
Cow position:
               
chr14:35700759-35700527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
95-366
               

               
Cow position:
               
chr14:24237142-24236869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
103, 14
               

               
Conread position:
               
97-366
               

               
Cow position:
               
chr14:22967073-22966799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 17
               

               
Conread position:
               
99-349
               

               
Cow position:
               
chr14:19106192-19105942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
101-366
               

               
Cow position:
               
chr14:49021584-49021856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
104, 48
               

               
Conread position:
               
103-362
               

               
Cow position:
               
chr14:33791507-33791236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
107-302
               

               
Cow position:
               
chr14:29605925-29606116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
96, 14
               

               
Conread position:
               
108-310
               

               
Cow position:
               
chr14:16834643-16834442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
96, 111
               

               
Conread position:
               
108-316
               

               
Cow position:
               
chr14:23712999-23712790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
96, 162
               

               
Conread position:
               
108-317
               

               
Cow position:
               
chr14:19851609-19851831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
34, 13
               

               
Conread position:
               
108-371
               

               
Cow position:
               
chr14:33751822-33751566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
39, 13
               

               
Conread position:
               
108-372
               

               
Cow position:
               
chr14:3564586-3564322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
38, 62
               

               
Conread position:
               
109-317
               

               
Cow position:
               
chr14:12856906-12856703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
95, 14
               

               
Conread position:
               
109-328
               

               
Cow position:
               
chr14:48412565-48412792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
109-362
               

               
Cow position:
               
chr14:37131969-37131701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
95, 14
               

               
Conread position:
               
112-308
               

               
Cow position:
               
chr14:12488393-12488588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
92, 114
               

               
Conread position:
               
113-317
               

               
Cow position:
               
chr14:24797271-24797472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
113-374
               

               
Cow position:
               
chr14:49086611-49086342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
116-308
               

               
Cow position:
               
chr14:5836209-5836012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
116-317
               

               
Cow position:
               
chr14:30662292-30662088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
88, 119
               

               
Conread position:
               
116-317
               

               
Cow position:
               
chr14:36709427-36709222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
87, 32
               

               
Conread position:
               
116-327
               

               
Cow position:
               
chr14:38143809-38144020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
88, 32
               

               
Conread position:
               
116-365
               

               
Cow position:
               
chr14:4109168-4109425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
33, 71
               

               
Conread position:
               
116-375
               

               
Cow position:
               
chr14:15518074-15518341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
117-307
               

               
Cow position:
               
chr14:15033060-15032873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
35, 114
               

               
Conread position:
               
117-317
               

               
Cow position:
               
chr14:7482359-7482157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
101, 158
               

               
Conread position:
               
117-317
               

               
Cow position:
               
chr14:14187637-14187434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
86, 122
               

               
Conread position:
               
117-317
               

               
Cow position:
               
chr14:14280721-14280514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
87, 63
               

               
Conread position:
               
117-317
               

               
Cow position:
               
chr14:23107630-23107429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
86, 51
               

               
Conread position:
               
117-317
               

               
Cow position:
               
chr14:25231345-25231543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
87, 113
               

               
Conread position:
               
117-317
               

               
Cow position:
               
chr14:38355487-38355288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
117-317
               

               
Cow position:
               
chr14:47591617-47591816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
83, 24
               

               
Conread position:
               
117-347
               

               
Cow position:
               
chr14:44878482-44878722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 69
               

               
Conread position:
               
117-372
               

               
Cow position:
               
chr14:41128194-41127935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 29
               

               
Conread position:
               
118-292
               

               
Cow position:
               
chr14:34329356-34329527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
155, 86
               

               
Conread position:
               
118-311
               

               
Cow position:
               
chr14:34330842-34330652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
155, 86
               

               
Conread position:
               
118-317
               

               
Cow position:
               
chr14:5630466-5630263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
22, 155
               

               
Conread position:
               
119-317
               

               
Cow position:
               
chr14:15913252-15913446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
85, 28
               

               
Conread position:
               
119-317
               

               
Cow position:
               
chr14:35711878-35712077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
120-318
               

               
Cow position:
               
chr14:32452562-32452353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
120-348
               

               
Cow position:
               
chr14:8540915-8541150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
140, 84
               

               
Conread position:
               
121-316
               

               
Cow position:
               
chr14:48740586-48740768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
152, 58
               

               
Conread position:
               
121-327
               

               
Cow position:
               
chr14:49929435-49929652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
82, 41
               

               
Conread position:
               
122-309
               

               
Cow position:
               
chr14:12613804-12613984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
151, 26
               

               
Conread position:
               
122-317
               

               
Cow position:
               
chr14:50589093-50589282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
82, 13
               

               
Conread position:
               
122-350
               

               
Cow position:
               
chr14:35018457-35018688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
82, 139
               

               
Conread position:
               
123-263
               

               
Cow position:
               
chr14:26654780-26654922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
123-317
               

               
Cow position:
               
chr14:19624388-19624187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
123-366
               

               
Cow position:
               
chr14:11819826-11820076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
81, 148
               

               
Conread position:
               
125-317
               

               
Cow position:
               
chr14:36151688-36151508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
126-366
               

               
Cow position:
               
chr14:10858726-10858479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
126-367
               

               
Cow position:
               
chr14:14466185-14466420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
78, 23
               

               
Conread position:
               
126-374
               

               
Cow position:
               
chr14:5221992-5222255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
81, 132
               

               
Conread position:
               
127-308
               

               
Cow position:
               
chr14:11614924-11615107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
128-327
               

               
Cow position:
               
chr14:24922399-24922190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
130-317
               

               
Cow position:
               
chr14:4226904-4227103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
131-309
               

               
Cow position:
               
chr14:47385925-47385753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
147, 70
               

               
Conread position:
               
132-329
               

               
Cow position:
               
chr14:8006049-8006240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
133-366
               

               
Cow position:
               
chr14:24981743-24981499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
10, 100
               

               
Conread position:
               
133-371
               

               
Cow position:
               
chr14:23464527-23464777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
72, 53
               

               
Conread position:
               
134-352
               

               
Cow position:
               
chr14:39433973-39434197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
10, 119
               

               
Conread position:
               
135-301
               

               
Cow position:
               
chr14:21230320-21230159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
68, 13
               

               
Conread position:
               
135-317
               

               
Cow position:
               
chr14:11810284-11810469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
84, 67
               

               
Conread position:
               
135-362
               

               
Cow position:
               
chr14:47672597-47672837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
68, 53
               

               
Conread position:
               
136-308
               

               
Cow position:
               
chr14:3437275-3437104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
67, 35
               

               
Conread position:
               
138-317
               

               
Cow position:
               
chr14:24786215-24786043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
66, 10
               

               
Conread position:
               
140-317
               

               
Cow position:
               
chr14:34355421-34355592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
135, 61
               

               
Conread position:
               
140-317
               

               
Cow position:
               
chr14:37884130-37884311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
63, 122
               

               
Conread position:
               
140-327
               

               
Cow position:
               
chr14:6233982-6234178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
141-317
               

               
Cow position:
               
chr14:19129791-19129611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
141-366
               

               
Cow position:
               
chr14:39422307-39422549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
142-299
               

               
Cow position:
               
chr14:17397326-17397484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 129
               

               
Conread position:
               
142-316
               

               
Cow position:
               
chr14:17841008-17841186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
69, 122
               

               
Conread position:
               
142-325
               

               
Cow position:
               
chr14:29632604-29632793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
143-315
               

               
Cow position:
               
chr14:24796145-24796323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
143-374
               

               
Cow position:
               
chr14:3868152-3868392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
148-317
               

               
Cow position:
               
chr14:50055674-50055493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
154-317
               

               
Cow position:
               
chr14:19372610-19372443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
156-309
               

               
Cow position:
               
chr14:24839913-24840066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
161-366
               

               
Cow position:
               
chr14:33309249-33309459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
43, 92
               

               
Conread position:
               
162-317
               

               
Cow position:
               
chr14:28114924-28115084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 103
               

               
Conread position:
               
163-317
               

               
Cow position:
               
chr14:40165679-40165525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
70, 92
               

               
Conread position:
               
163-345
               

               
Cow position:
               
chr14:34984122-34983933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
164-317
               

               
Cow position:
               
chr14:28004237-28004078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
166-317
               

               
Cow position:
               
chr14:6175838-6175684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
168-317
               

               
Cow position:
               
chr14:26470882-26470729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
171-317
               

               
Cow position:
               
chr14:16033257-16033110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
26, 60
               

               
Conread position:
               
172-317
               

               
Cow position:
               
chr14:27919489-27919636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
31, 53
               

               
Conread position:
               
179-341
               

               
Cow position:
               
chr14:8750316-8750148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
179-366
               

               
Cow position:
               
chr14:33643549-33643736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
25, 51
               

               
Conread position:
               
187-373
               

               
Cow position:
               
chr14:26490510-26490705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 66
               

               
Conread position:
               
204-372
               

               
Cow position:
               
chr14:19394575-19394399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
206-372
               

               
Cow position:
               
chr14:14581079-14580907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
67, 84
               

               
Conread position:
               
206-374
               

               
Cow position:
               
chr14:26190886-26191068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
59, 83
               
Show alignments to all cow chromosomes.