Cow genome map

Conread name: Lym1-jns19bF07.f

Conread position: 1-306
Cow position: chr16:42073336-42073035 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 121

Conread position: 1-307
Cow position: chr16:11105175-11105483 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 220
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 10, 145

Conread position: 1-315
Cow position: chr16:7498693-7498999 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 121

Conread position: 1-317
Cow position: chr16:18141702-18141388 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 230
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 10, 101

Conread position: 1-317
Cow position: chr16:19757162-19756857 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 228
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 10, 116

Conread position: 1-317
Cow position: chr16:43275646-43275962 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 116

Conread position: 1-317
Cow position: chr16:49126559-49126248 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 121

Conread position: 1-317
Cow position: chr16:49169755-49169444 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 90

Conread position: 1-327
Cow position: chr16:11568485-11568167 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 63

Conread position: 1-327
Cow position: chr16:31159946-31159618 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 71

Conread position: 1-327
Cow position: chr16:46552431-46552756 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 241
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 10, 157

Conread position: 1-362
Cow position: chr16:51598978-51598617 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 252
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 10, 121

Conread position: 1-366
Cow position: chr16:20025047-20025443 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 271
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 10, 0

Conread position: 1-366
Cow position: chr16:40561850-40562231 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 111

Conread position: 1-372
Cow position: chr16:17665263-17665638 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 100

Conread position: 1-374
Cow position: chr16:23823387-23823020 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 85

Conread position: 2-311
Cow position: chr16:26654813-26655113 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 219
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 203, 9

Conread position: 2-317
Cow position: chr16:12633535-12633827 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 9, 85

Conread position: 2-317
Cow position: chr16:15255322-15255010 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 256, 99

Conread position: 2-317
Cow position: chr16:18758214-18757899 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 234
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 9, 62

Conread position: 2-317
Cow position: chr16:49253111-49252815 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 273, 99

Conread position: 2-317
Cow position: chr16:53225177-53224873 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 202, 76

Conread position: 2-317
Cow position: chr16:56913085-56912776 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 223
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 202, 8

Conread position: 2-327
Cow position: chr16:2223779-2223448 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 78

Conread position: 2-327
Cow position: chr16:8026215-8025896 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 32, 9

Conread position: 2-327
Cow position: chr16:56231448-56231779 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 230
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 9, 120

Conread position: 2-329
Cow position: chr16:26677050-26676731 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 8

Conread position: 2-347
Cow position: chr16:8840518-8840869 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 112

Conread position: 2-366
Cow position: chr16:16265471-16265102 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 89

Conread position: 2-366
Cow position: chr16:17142561-17142933 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 38

Conread position: 2-372
Cow position: chr16:31978563-31978181 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 17

Conread position: 3-317
Cow position: chr16:7456830-7456519 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 228
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 8, 77

Conread position: 3-327
Cow position: chr16:26500790-26501110 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 99

Conread position: 3-362
Cow position: chr16:51500558-51500927 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 82

Conread position: 3-365
Cow position: chr16:24147783-24148151 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 262
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 13, 95

Conread position: 4-327
Cow position: chr16:15188826-15189135 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 98

Conread position: 4-327
Cow position: chr16:31558520-31558847 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 112

Conread position: 10-308
Cow position: chr16:34210779-34210477 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 194, 111

Conread position: 10-311
Cow position: chr16:29654962-29655264 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 69

Conread position: 10-316
Cow position: chr16:18205595-18205900 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 213

Conread position: 10-317
Cow position: chr16:4144694-4145005 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 142

Conread position: 10-317
Cow position: chr16:4502914-4503223 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 106

Conread position: 10-317
Cow position: chr16:7083099-7082793 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 104

Conread position: 10-317
Cow position: chr16:13698142-13698453 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 68

Conread position: 10-317
Cow position: chr16:14028983-14028687 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 224
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 156, 66

Conread position: 10-317
Cow position: chr16:15370318-15370623 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 60

Conread position: 10-317
Cow position: chr16:32132168-32132466 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 55

Conread position: 10-317
Cow position: chr16:53509354-53509042 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 111

Conread position: 10-317
Cow position: chr16:55042919-55042616 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 172, 109

Conread position: 10-341
Cow position: chr16:56149948-56150269 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 19

Conread position: 10-352
Cow position: chr16:54578806-54579148 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 92

Conread position: 10-362
Cow position: chr16:13307231-13306876 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 100

Conread position: 10-362
Cow position: chr16:30143580-30143211 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 138

Conread position: 10-362
Cow position: chr16:33226897-33226543 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 61

Conread position: 10-369
Cow position: chr16:42218059-42217688 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 10-374
Cow position: chr16:600578-600953 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 112

Conread position: 11-366
Cow position: chr16:45139303-45139670 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 137

Conread position: 12-356
Cow position: chr16:28922427-28922770 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 32

Conread position: 17-300
Cow position: chr16:33777460-33777738 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 205
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 186, 104

Conread position: 18-309
Cow position: chr16:43804141-43804430 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 90

Conread position: 18-311
Cow position: chr16:15363395-15363679 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 213
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 185, 91

Conread position: 18-317
Cow position: chr16:24825709-24826012 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 103

Conread position: 18-317
Cow position: chr16:33299036-33299336 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 18

Conread position: 18-319
Cow position: chr16:49230128-49229830 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 83

Conread position: 18-327
Cow position: chr16:5416110-5415804 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 98

Conread position: 18-332
Cow position: chr16:53814015-53813694 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 91

Conread position: 18-351
Cow position: chr16:9790983-9790651 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 37

Conread position: 18-360
Cow position: chr16:5293301-5293639 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 107

Conread position: 18-371
Cow position: chr16:35187896-35188257 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 99

Conread position: 18-374
Cow position: chr16:44744507-44744126 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 270
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 89, 203

Conread position: 22-300
Cow position: chr16:56445756-56445476 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 181, 92

Conread position: 25-265
Cow position: chr16:29967135-29967368 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 179, 81

Conread position: 25-300
Cow position: chr16:17867814-17867549 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 124, 77

Conread position: 25-317
Cow position: chr16:3633765-3634051 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 179, 76

Conread position: 25-317
Cow position: chr16:6379460-6379167 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 121, 78

Conread position: 25-317
Cow position: chr16:7665276-7665577 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 126

Conread position: 25-317
Cow position: chr16:49125871-49125588 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 96

Conread position: 25-317
Cow position: chr16:52855371-52855083 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 28, 95

Conread position: 25-350
Cow position: chr16:46752630-46752301 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 135, 96

Conread position: 25-366
Cow position: chr16:4699304-4698989 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 244
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 248, 52

Conread position: 25-366
Cow position: chr16:16402679-16402324 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 250
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 180, 83

Conread position: 25-366
Cow position: chr16:35757866-35758201 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 178, 76

Conread position: 25-366
Cow position: chr16:41037336-41037689 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 178, 76

Conread position: 25-374
Cow position: chr16:45609635-45609994 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 96

Conread position: 26-264
Cow position: chr16:7427215-7426977 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 163
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 158, 83

Conread position: 26-264
Cow position: chr16:33675108-33674867 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 160
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 78, 115

Conread position: 26-372
Cow position: chr16:4910878-4910520 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 80

Conread position: 26-374
Cow position: chr16:30289966-30290315 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 95

Conread position: 30-364
Cow position: chr16:47098335-47098009 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 219
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 292, 36

Conread position: 31-317
Cow position: chr16:47336385-47336672 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 50, 15

Conread position: 31-366
Cow position: chr16:33645675-33646014 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 43

Conread position: 33-364
Cow position: chr16:42079181-42078850 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 30

Conread position: 34-317
Cow position: chr16:13195670-13195401 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 204
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 170, 64

Conread position: 34-366
Cow position: chr16:13791163-13791516 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 35-309
Cow position: chr16:7504759-7505020 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 201
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 81, 0

Conread position: 35-309
Cow position: chr16:8620909-8621165 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 206
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 240, 74

Conread position: 35-317
Cow position: chr16:4981709-4981442 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 99, 73

Conread position: 35-317
Cow position: chr16:9497614-9497335 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 86

Conread position: 35-317
Cow position: chr16:16096405-16096677 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 54

Conread position: 35-317
Cow position: chr16:22842410-22842118 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 82, 211

Conread position: 35-317
Cow position: chr16:48087211-48086927 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 79

Conread position: 35-335
Cow position: chr16:5725139-5725418 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 209
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 73, 0

Conread position: 35-346
Cow position: chr16:38664049-38663734 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 66

Conread position: 35-347
Cow position: chr16:39385060-39385384 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 73

Conread position: 35-356
Cow position: chr16:33704465-33704787 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 232
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 36, 74

Conread position: 35-365
Cow position: chr16:48341030-48340696 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 243
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 284, 73

Conread position: 35-366
Cow position: chr16:4059026-4059355 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 169, 52

Conread position: 35-366
Cow position: chr16:16424945-16424611 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 86

Conread position: 35-366
Cow position: chr16:33507726-33508052 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 242
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 168, 25

Conread position: 35-366
Cow position: chr16:42092714-42092389 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 63

Conread position: 35-375
Cow position: chr16:6692950-6692593 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 253
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 55, 68

Conread position: 35-384
Cow position: chr16:21450513-21450865 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 63

Conread position: 36-303
Cow position: chr16:18678858-18679123 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 189
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 168, 32

Conread position: 36-362
Cow position: chr16:15824778-15824448 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 238
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 168, 85

Conread position: 37-264
Cow position: chr16:9235834-9235588 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 37-264
Cow position: chr16:13177061-13177290 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 167, 83

Conread position: 37-317
Cow position: chr16:5726591-5726863 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 72

Conread position: 37-317
Cow position: chr16:23024997-23025286 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 194
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 73, 66

Conread position: 37-331
Cow position: chr16:4626733-4626434 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 220
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 167, 84

Conread position: 37-342
Cow position: chr16:41752921-41752608 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 306

Conread position: 37-351
Cow position: chr16:23737846-23738157 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 166, 31

Conread position: 37-366
Cow position: chr16:14754671-14754328 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 240
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 76, 39

Conread position: 37-366
Cow position: chr16:38709158-38708838 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 239
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 167, 65

Conread position: 37-370
Cow position: chr16:39616406-39616735 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 34

Conread position: 38-372
Cow position: chr16:11775385-11775047 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 18

Conread position: 39-317
Cow position: chr16:15808634-15808915 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 82

Conread position: 42-308
Cow position: chr16:30715158-30715427 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 67

Conread position: 42-308
Cow position: chr16:56875983-56875717 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 161, 42

Conread position: 42-311
Cow position: chr16:11790667-11790951 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 210
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 56, 0

Conread position: 42-317
Cow position: chr16:9932821-9933099 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 21, 76

Conread position: 42-327
Cow position: chr16:39514418-39514124 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 151

Conread position: 42-368
Cow position: chr16:52789732-52790057 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 162, 42

Conread position: 44-317
Cow position: chr16:30939405-30939675 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 57

Conread position: 44-374
Cow position: chr16:53554044-53553712 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 57

Conread position: 48-308
Cow position: chr16:39394249-39394508 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 68

Conread position: 49-317
Cow position: chr16:23472416-23472688 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 206
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 63, 176

Conread position: 51-265
Cow position: chr16:23038421-23038213 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 154, 27

Conread position: 51-316
Cow position: chr16:42253894-42253626 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 20

Conread position: 53-300
Cow position: chr16:14800061-14799820 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 172
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 19, 49

Conread position: 53-350
Cow position: chr16:18496488-18496189 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 156, 42

Conread position: 54-317
Cow position: chr16:5845347-5845611 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 57, 36

Conread position: 54-326
Cow position: chr16:590225-589964 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 150, 49

Conread position: 57-327
Cow position: chr16:13611772-13611500 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 57, 101

Conread position: 60-317
Cow position: chr16:37062708-37062455 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 143, 61

Conread position: 60-365
Cow position: chr16:47017557-47017262 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 216
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 146, 19

Conread position: 62-366
Cow position: chr16:42242432-42242118 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 54

Conread position: 64-265
Cow position: chr16:25606785-25606991 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 61, 21

Conread position: 64-317
Cow position: chr16:3632981-3633237 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 139, 15

Conread position: 64-374
Cow position: chr16:7078050-7077736 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 234
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 139, 57

Conread position: 65-326
Cow position: chr16:37379959-37380221 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 69, 36

Conread position: 65-374
Cow position: chr16:39279389-39279063 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 239
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 138, 56

Conread position: 68-296
Cow position: chr16:13043488-13043719 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 156
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 136, 40

Conread position: 72-317
Cow position: chr16:14360803-14361047 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 49

Conread position: 72-346
Cow position: chr16:43743243-43742969 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 190
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 132, 36

Conread position: 72-363
Cow position: chr16:9973806-9973511 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 49

Conread position: 80-304
Cow position: chr16:8438923-8438709 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 174
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 69, 44

Conread position: 80-352
Cow position: chr16:35343771-35343492 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 34

Conread position: 81-371
Cow position: chr16:29608225-29608522 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 122, 16

Conread position: 82-373
Cow position: chr16:23482994-23483288 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 121, 27

Conread position: 85-351
Cow position: chr16:51869347-51869619 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 199
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 124, 31

Conread position: 85-354
Cow position: chr16:8522681-8522407 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 18, 36

Conread position: 87-317
Cow position: chr16:43506089-43505862 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 116, 183

Conread position: 90-327
Cow position: chr16:819965-820202 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 31

Conread position: 90-327
Cow position: chr16:53627710-53627474 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 183
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 7, 27

Conread position: 91-317
Cow position: chr16:33751911-33752137 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 8, 22

Conread position: 93-317
Cow position: chr16:56846181-56845953 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 177
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 56, 33

Conread position: 93-374
Cow position: chr16:4902320-4902595 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 223, 12

Conread position: 93-374
Cow position: chr16:34168312-34168593 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 23

Conread position: 94-362
Cow position: chr16:14106362-14106637 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 51, 0

Conread position: 95-308
Cow position: chr16:15320752-15320534 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 109, 77

Conread position: 96-366
Cow position: chr16:39417387-39417121 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 198
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 107, 20

Conread position: 98-374
Cow position: chr16:35937058-35937348 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 209
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 107, 18

Conread position: 98-375
Cow position: chr16:29379976-29380257 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 23

Conread position: 102-366
Cow position: chr16:25287964-25287692 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 101, 6

Conread position: 103-309
Cow position: chr16:30515857-30515659 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 52

Conread position: 103-374
Cow position: chr16:20476259-20476542 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 202
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 27, 144

Conread position: 106-366
Cow position: chr16:8315445-8315194 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 97, 17

Conread position: 108-300
Cow position: chr16:22786316-22786124 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 96, 40

Conread position: 108-305
Cow position: chr16:27004930-27005131 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 96, 0

Conread position: 108-317
Cow position: chr16:5363623-5363836 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 97, 11

Conread position: 108-317
Cow position: chr16:24403462-24403680 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 170
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 95, 13

Conread position: 108-317
Cow position: chr16:52889680-52889469 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 96, 184

Conread position: 108-356
Cow position: chr16:8959333-8959079 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 95, 111

Conread position: 108-362
Cow position: chr16:8367095-8366835 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 185
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 36, 168

Conread position: 108-366
Cow position: chr16:22868447-22868179 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 203
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 26, 43

Conread position: 108-375
Cow position: chr16:571185-570908 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 96, 16

Conread position: 109-306
Cow position: chr16:53086593-53086401 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 159
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 95, 40

Conread position: 109-314
Cow position: chr16:45813961-45813765 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 95, 25

Conread position: 109-317
Cow position: chr16:25484099-25484305 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 93, 39

Conread position: 109-317
Cow position: chr16:53613030-53613244 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 95, 39

Conread position: 109-366
Cow position: chr16:14242106-14242370 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 40, 103

Conread position: 110-365
Cow position: chr16:5740987-5741238 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 205, 38

Conread position: 110-366
Cow position: chr16:3614480-3614746 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 94, 123

Conread position: 111-327
Cow position: chr16:14758472-14758687 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 93, 36

Conread position: 111-346
Cow position: chr16:3246459-3246231 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 183
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 157, 40

Conread position: 111-362
Cow position: chr16:18402429-18402674 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 94

Conread position: 111-366
Cow position: chr16:5256736-5256995 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 190
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 93, 63

Conread position: 111-374
Cow position: chr16:30209496-30209757 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 164, 40

Conread position: 112-309
Cow position: chr16:4372762-4372562 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 37

Conread position: 112-317
Cow position: chr16:902153-901942 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 92, 0

Conread position: 112-375
Cow position: chr16:50282695-50282425 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 113, 9

Conread position: 113-310
Cow position: chr16:46521637-46521831 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 90, 106

Conread position: 113-328
Cow position: chr16:37116809-37117028 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 173
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 90, 108

Conread position: 114-318
Cow position: chr16:7429114-7429319 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 90, 72

Conread position: 116-308
Cow position: chr16:5243701-5243901 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 117-316
Cow position: chr16:11619493-11619688 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 157
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 87, 102

Conread position: 117-317
Cow position: chr16:20634131-20633938 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 88, 37

Conread position: 117-317
Cow position: chr16:48145660-48145462 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 147, 78

Conread position: 118-361
Cow position: chr16:16597302-16597551 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 88, 145

Conread position: 119-343
Cow position: chr16:23033610-23033819 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 165
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 201, 81

Conread position: 119-362
Cow position: chr16:35623509-35623249 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 194
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 34, 160

Conread position: 120-327
Cow position: chr16:47245330-47245541 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 140, 79

Conread position: 120-327
Cow position: chr16:52182026-52182221 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 160
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 140, 42

Conread position: 120-374
Cow position: chr16:35195868-35195606 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 85, 28

Conread position: 121-294
Cow position: chr16:44688536-44688360 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 105, 27

Conread position: 122-294
Cow position: chr16:30909187-30909002 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 122-314
Cow position: chr16:11615484-11615295 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 82, 94

Conread position: 123-327
Cow position: chr16:22850074-22850281 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 80, 29

Conread position: 123-366
Cow position: chr16:8933674-8933426 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 188
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 147, 25

Conread position: 123-366
Cow position: chr16:13752378-13752133 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 178
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 45, 25

Conread position: 123-366
Cow position: chr16:26649888-26649630 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 80, 25

Conread position: 124-310
Cow position: chr16:43661198-43661377 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 6, 78

Conread position: 124-366
Cow position: chr16:9985636-9985394 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 80, 24

Conread position: 125-317
Cow position: chr16:51070182-51069978 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 125-317
Cow position: chr16:53892034-53891842 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 78, 145

Conread position: 126-327
Cow position: chr16:37452868-37452662 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 161
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 17, 54

Conread position: 126-374
Cow position: chr16:46353826-46353589 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 148, 78

Conread position: 127-327
Cow position: chr16:42633999-42633797 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 135, 77

Conread position: 128-371
Cow position: chr16:14568734-14568485 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 75, 20

Conread position: 129-370
Cow position: chr16:11806433-11806675 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 197, 19

Conread position: 129-374
Cow position: chr16:33588419-33588674 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 75, 0

Conread position: 131-317
Cow position: chr16:47620133-47620321 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 73, 140

Conread position: 132-317
Cow position: chr16:32327406-32327591 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 72, 141

Conread position: 133-276
Cow position: chr16:52802395-52802543 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 133-317
Cow position: chr16:29557876-29557687 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 71, 0

Conread position: 135-327
Cow position: chr16:23810679-23810866 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 140, 64

Conread position: 135-350
Cow position: chr16:4277957-4277743 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 68, 162

Conread position: 137-306
Cow position: chr16:33235376-33235202 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 138-327
Cow position: chr16:7152414-7152218 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 12, 0

Conread position: 138-342
Cow position: chr16:35168485-35168696 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 137

Conread position: 138-372
Cow position: chr16:10148041-10148287 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 66, 80

Conread position: 138-374
Cow position: chr16:53048311-53048559 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 186
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 153

Conread position: 139-317
Cow position: chr16:4134627-4134813 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 139-317
Cow position: chr16:45046389-45046562 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 147

Conread position: 139-327
Cow position: chr16:45047862-45047676 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 178, 12

Conread position: 139-366
Cow position: chr16:36203854-36203625 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 172
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 65, 94

Conread position: 139-372
Cow position: chr16:56082599-56082360 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 64, 132

Conread position: 142-309
Cow position: chr16:11422074-11422243 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 0

Conread position: 142-317
Cow position: chr16:8812322-8812142 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 62, 7

Conread position: 142-317
Cow position: chr16:45534947-45535121 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 135, 93

Conread position: 143-297
Cow position: chr16:4192655-4192498 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 143-317
Cow position: chr16:30037229-30037051 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 24

Conread position: 143-374
Cow position: chr16:29399758-29399994 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 185

Conread position: 144-309
Cow position: chr16:5896185-5896351 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 60, 126

Conread position: 145-317
Cow position: chr16:50288924-50289090 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 58, 67

Conread position: 149-317
Cow position: chr16:43324142-43323970 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 133

Conread position: 149-350
Cow position: chr16:15504755-15504549 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 178

Conread position: 150-366
Cow position: chr16:27249181-27249403 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 159

Conread position: 152-366
Cow position: chr16:21904936-21905162 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 52, 113

Conread position: 152-366
Cow position: chr16:43105739-43105516 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 0

Conread position: 153-317
Cow position: chr16:12361197-12361036 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 71

Conread position: 156-317
Cow position: chr16:47116448-47116607 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 109, 47

Conread position: 158-301
Cow position: chr16:13713134-13712987 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 161-318
Cow position: chr16:594446-594285 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 162-373
Cow position: chr16:45677068-45676859 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 42, 177

Conread position: 163-366
Cow position: chr16:8323201-8322983 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 111

Conread position: 164-362
Cow position: chr16:10592226-10592428 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 110, 40

Conread position: 168-372
Cow position: chr16:8066091-8065883 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 44

Conread position: 169-311
Cow position: chr16:9615444-9615305 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 35, 50

Conread position: 169-317
Cow position: chr16:41530500-41530350 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 172-317
Cow position: chr16:52275336-52275190 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 178-374
Cow position: chr16:17626730-17626936 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 179-314
Cow position: chr16:56787977-56787838 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 179-317
Cow position: chr16:14685588-14685449 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 91

Conread position: 179-350
Cow position: chr16:9787361-9787543 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 202-327
Cow position: chr16:8076683-8076554 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 208-317
Cow position: chr16:9136007-9136117 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 65, 0

Show alignments to all cow chromosomes.