Cow genome map

Conread name: Lym1-jns19bF07.f

Conread position: 1-277
Cow position: chr17:29715521-29715245 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 83

Conread position: 1-306
Cow position: chr17:33288989-33288685 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 116

Conread position: 1-317
Cow position: chr17:5896247-5895929 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 147

Conread position: 1-317
Cow position: chr17:20233892-20234210 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 121

Conread position: 1-317
Cow position: chr17:21495042-21495358 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 26

Conread position: 1-317
Cow position: chr17:26764682-26764999 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 232
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 10, 98

Conread position: 1-317
Cow position: chr17:27667529-27667207 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 229
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 10, 114

Conread position: 1-317
Cow position: chr17:30539584-30539271 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 121

Conread position: 1-317
Cow position: chr17:32457915-32457587 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 10, 111

Conread position: 1-317
Cow position: chr17:43717643-43717333 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 138

Conread position: 1-328
Cow position: chr17:3781700-3782039 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 0

Conread position: 1-353
Cow position: chr17:20083845-20083498 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 9

Conread position: 1-362
Cow position: chr17:5767566-5767942 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 36

Conread position: 1-362
Cow position: chr17:34317052-34316679 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 158

Conread position: 1-370
Cow position: chr17:25542147-25541787 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 263
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 10, 122

Conread position: 1-371
Cow position: chr17:9853652-9854028 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 121

Conread position: 2-256
Cow position: chr17:23517501-23517248 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 108

Conread position: 2-316
Cow position: chr17:14003497-14003798 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 2-316
Cow position: chr17:23337346-23337036 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 8

Conread position: 2-317
Cow position: chr17:3498996-3498682 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 8

Conread position: 2-317
Cow position: chr17:6566145-6566447 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 78

Conread position: 2-317
Cow position: chr17:11056709-11056389 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 31

Conread position: 2-317
Cow position: chr17:20800482-20800798 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 120

Conread position: 2-317
Cow position: chr17:24077074-24077385 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 7

Conread position: 2-317
Cow position: chr17:24549837-24550158 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 8

Conread position: 2-327
Cow position: chr17:9564977-9565302 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 69

Conread position: 2-327
Cow position: chr17:21680436-21680759 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 8

Conread position: 2-366
Cow position: chr17:20993374-20992998 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 120

Conread position: 2-374
Cow position: chr17:21336029-21335645 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 8

Conread position: 3-292
Cow position: chr17:21038947-21039235 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 68

Conread position: 3-309
Cow position: chr17:15985025-15985323 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 77

Conread position: 3-317
Cow position: chr17:13922144-13922460 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 105

Conread position: 3-317
Cow position: chr17:17222012-17222326 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 69

Conread position: 3-317
Cow position: chr17:28539710-28540011 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 66

Conread position: 3-327
Cow position: chr17:39857086-39857383 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 230
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 74, 84

Conread position: 4-340
Cow position: chr17:20093456-20093127 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 240
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 7, 118

Conread position: 6-327
Cow position: chr17:30664951-30665266 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 12

Conread position: 10-293
Cow position: chr17:13725987-13726275 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 104

Conread position: 10-300
Cow position: chr17:26771679-26771392 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 111

Conread position: 10-317
Cow position: chr17:11102108-11101819 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 195, 61

Conread position: 10-317
Cow position: chr17:12289744-12289436 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 270

Conread position: 10-317
Cow position: chr17:13144007-13143709 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 103

Conread position: 10-317
Cow position: chr17:18861043-18860741 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 98

Conread position: 10-317
Cow position: chr17:39412822-39412518 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 202
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 142, 33

Conread position: 10-327
Cow position: chr17:979459-979161 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 224
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 194, 106

Conread position: 10-332
Cow position: chr17:27305838-27306159 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 99

Conread position: 10-351
Cow position: chr17:32989168-32989497 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 245
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 308, 106

Conread position: 10-366
Cow position: chr17:11839376-11839754 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 111

Conread position: 10-366
Cow position: chr17:32993938-32993584 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 106

Conread position: 10-366
Cow position: chr17:41029627-41029990 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 106

Conread position: 10-367
Cow position: chr17:21960003-21959648 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 61

Conread position: 10-372
Cow position: chr17:20780194-20780554 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 32

Conread position: 10-374
Cow position: chr17:11618255-11618635 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 111

Conread position: 10-374
Cow position: chr17:25815283-25815650 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 106

Conread position: 12-327
Cow position: chr17:25188960-25189282 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 89

Conread position: 12-374
Cow position: chr17:20653224-20652863 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 256
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 84, 110

Conread position: 14-365
Cow position: chr17:242318-242676 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 79

Conread position: 14-372
Cow position: chr17:40289323-40288955 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 259
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 8, 89

Conread position: 17-327
Cow position: chr17:23063396-23063710 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 84

Conread position: 17-355
Cow position: chr17:10529059-10528709 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 104

Conread position: 17-365
Cow position: chr17:3306550-3306897 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 74

Conread position: 18-300
Cow position: chr17:43527666-43527942 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 207
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 185, 42

Conread position: 18-317
Cow position: chr17:32651299-32651601 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 103

Conread position: 18-317
Cow position: chr17:33271990-33271702 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 240, 81

Conread position: 18-327
Cow position: chr17:10649532-10649836 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 98

Conread position: 18-327
Cow position: chr17:26230622-26230945 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 98

Conread position: 18-350
Cow position: chr17:44924492-44924170 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 238
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 257, 91

Conread position: 18-365
Cow position: chr17:24883880-24883533 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 245
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 92, 50

Conread position: 18-366
Cow position: chr17:27795331-27795687 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 98

Conread position: 18-366
Cow position: chr17:42419421-42419759 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 255
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 46, 98

Conread position: 18-372
Cow position: chr17:34595627-34595985 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 103

Conread position: 18-376
Cow position: chr17:43142037-43141673 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 255
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 134, 98

Conread position: 18-380
Cow position: chr17:32365969-32366327 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 253
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 186, 96

Conread position: 19-306
Cow position: chr17:35388330-35388042 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 192
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 90, 129

Conread position: 19-317
Cow position: chr17:2810300-2810607 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 217
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 111, 52

Conread position: 19-317
Cow position: chr17:4606656-4606940 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 19-350
Cow position: chr17:32027778-32027435 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 95

Conread position: 22-317
Cow position: chr17:22563883-22564163 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 79

Conread position: 22-327
Cow position: chr17:11216193-11215897 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 212
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 294, 79

Conread position: 24-315
Cow position: chr17:21874627-21874327 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 92

Conread position: 24-374
Cow position: chr17:38614649-38615007 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 66

Conread position: 25-317
Cow position: chr17:3518549-3518272 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 203
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 180, 88

Conread position: 25-317
Cow position: chr17:3843182-3843461 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 179, 76

Conread position: 25-317
Cow position: chr17:14026225-14025931 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 182, 96

Conread position: 25-348
Cow position: chr17:9117338-9117665 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 31

Conread position: 25-371
Cow position: chr17:24553694-24554048 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 84

Conread position: 25-374
Cow position: chr17:34079408-34079064 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 96

Conread position: 26-351
Cow position: chr17:21293354-21293023 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 90

Conread position: 26-372
Cow position: chr17:30529845-30529500 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 90

Conread position: 29-317
Cow position: chr17:28285325-28285050 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 169, 53

Conread position: 30-362
Cow position: chr17:15103185-15102859 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 174, 68

Conread position: 31-367
Cow position: chr17:38832738-38833081 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 90

Conread position: 33-261
Cow position: chr17:3154071-3153843 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 170, 68

Conread position: 33-317
Cow position: chr17:25168011-25168300 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 88

Conread position: 35-309
Cow position: chr17:1061358-1061086 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 52

Conread position: 35-309
Cow position: chr17:5224103-5224374 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 86

Conread position: 35-317
Cow position: chr17:1295871-1295588 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 81

Conread position: 35-317
Cow position: chr17:5000877-5000597 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 31, 89

Conread position: 35-317
Cow position: chr17:12059393-12059113 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 211
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 73, 36

Conread position: 35-317
Cow position: chr17:40771528-40771818 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 0

Conread position: 35-320
Cow position: chr17:40331469-40331751 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 169, 86

Conread position: 35-350
Cow position: chr17:21973431-21973118 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 171, 86

Conread position: 35-351
Cow position: chr17:21363112-21363426 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 44

Conread position: 35-355
Cow position: chr17:1410546-1410215 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 115

Conread position: 35-362
Cow position: chr17:24973650-24973976 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 81

Conread position: 35-366
Cow position: chr17:3386997-3387312 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 66

Conread position: 36-311
Cow position: chr17:15664370-15664646 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 85

Conread position: 36-346
Cow position: chr17:4601842-4601531 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 221
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 168, 85

Conread position: 36-370
Cow position: chr17:29472183-29472510 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 43

Conread position: 37-248
Cow position: chr17:11912998-11912788 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 47, 39

Conread position: 37-308
Cow position: chr17:30204360-30204629 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 120, 14

Conread position: 37-317
Cow position: chr17:5688645-5688376 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 37-368
Cow position: chr17:18109384-18109042 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 82

Conread position: 41-308
Cow position: chr17:16895588-16895332 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 162, 70

Conread position: 41-308
Cow position: chr17:23880121-23879851 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 151, 52

Conread position: 41-308
Cow position: chr17:27697986-27697730 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 243, 75

Conread position: 41-347
Cow position: chr17:26084739-26085049 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 211
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 71, 67

Conread position: 41-366
Cow position: chr17:8690746-8690402 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 171

Conread position: 42-327
Cow position: chr17:20848243-20848516 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 213
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 233, 21

Conread position: 42-347
Cow position: chr17:25900906-25901214 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 226
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 177, 79

Conread position: 42-363
Cow position: chr17:26182929-26183248 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 79

Conread position: 42-366
Cow position: chr17:13244313-13244006 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 236
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 162, 34

Conread position: 44-362
Cow position: chr17:12216362-12216048 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 43

Conread position: 45-366
Cow position: chr17:3471125-3471458 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 0

Conread position: 49-306
Cow position: chr17:25740664-25740923 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 154, 68

Conread position: 49-316
Cow position: chr17:16448048-16448319 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 155, 70

Conread position: 49-317
Cow position: chr17:18720730-18720468 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 44

Conread position: 53-327
Cow position: chr17:5423357-5423078 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 5

Conread position: 57-365
Cow position: chr17:8544030-8544342 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 55

Conread position: 60-298
Cow position: chr17:40312453-40312689 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 142, 41

Conread position: 60-317
Cow position: chr17:22032958-22032709 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 195
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 144, 61

Conread position: 61-317
Cow position: chr17:11296364-11296621 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 142, 37

Conread position: 62-327
Cow position: chr17:7041210-7040952 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 141, 39

Conread position: 62-374
Cow position: chr17:11278295-11277981 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 141, 59

Conread position: 62-374
Cow position: chr17:37163802-37163484 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 278

Conread position: 63-317
Cow position: chr17:17950971-17951223 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 58

Conread position: 63-317
Cow position: chr17:20126349-20126594 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 140, 53

Conread position: 71-261
Cow position: chr17:13124998-13124806 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 127, 35

Conread position: 71-374
Cow position: chr17:42347485-42347177 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 50

Conread position: 72-356
Cow position: chr17:4612339-4612048 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 214
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 131, 29

Conread position: 81-302
Cow position: chr17:26818706-26818483 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 124, 40

Conread position: 81-340
Cow position: chr17:21115199-21114947 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 239, 20

Conread position: 83-372
Cow position: chr17:31481291-31481000 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 66, 18

Conread position: 84-264
Cow position: chr17:30329435-30329623 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 84-365
Cow position: chr17:21004082-21003796 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 37

Conread position: 85-311
Cow position: chr17:21031538-21031758 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 119, 31

Conread position: 85-366
Cow position: chr17:16371001-16371295 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 5

Conread position: 90-317
Cow position: chr17:27142509-27142741 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 114, 0

Conread position: 90-358
Cow position: chr17:18495752-18495489 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 203
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 59, 26

Conread position: 95-317
Cow position: chr17:1526593-1526373 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 108, 26

Conread position: 98-365
Cow position: chr17:4824262-4824527 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 120, 47

Conread position: 102-317
Cow position: chr17:33999277-33999067 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 157
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 100, 19

Conread position: 102-366
Cow position: chr17:32419352-32419077 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 14

Conread position: 103-317
Cow position: chr17:4721255-4721472 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 172
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 162, 13

Conread position: 103-318
Cow position: chr17:27162417-27162631 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 5, 174

Conread position: 108-264
Cow position: chr17:7423670-7423513 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 96, 0

Conread position: 108-309
Cow position: chr17:6423532-6423734 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 123, 40

Conread position: 108-316
Cow position: chr17:7132684-7132470 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 93, 0

Conread position: 108-317
Cow position: chr17:15684276-15684494 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 95, 125

Conread position: 108-317
Cow position: chr17:16307150-16307360 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 154
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 11, 124

Conread position: 108-350
Cow position: chr17:17410069-17410311 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 97, 67

Conread position: 108-371
Cow position: chr17:9697930-9697656 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 50, 26

Conread position: 108-372
Cow position: chr17:27274333-27274607 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 95, 0

Conread position: 109-308
Cow position: chr17:1359025-1358828 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 95, 42

Conread position: 109-308
Cow position: chr17:11172844-11172644 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 109-327
Cow position: chr17:25707727-25707951 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 95, 180

Conread position: 110-371
Cow position: chr17:20835366-20835633 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 94, 153

Conread position: 111-317
Cow position: chr17:20839784-20839579 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 92, 37

Conread position: 113-308
Cow position: chr17:23245987-23246184 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 11, 54

Conread position: 114-309
Cow position: chr17:18884570-18884363 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 163
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 77, 34

Conread position: 116-316
Cow position: chr17:22806755-22806558 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 88, 18

Conread position: 117-317
Cow position: chr17:2079541-2079742 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 86, 13

Conread position: 117-317
Cow position: chr17:9746301-9746496 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 87, 31

Conread position: 117-317
Cow position: chr17:32554243-32554043 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 166
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 87, 31

Conread position: 117-317
Cow position: chr17:39012498-39012707 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 117-318
Cow position: chr17:15333930-15333730 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 88, 23

Conread position: 117-327
Cow position: chr17:17452822-17452610 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 88, 51

Conread position: 117-356
Cow position: chr17:13672296-13672052 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 18

Conread position: 117-362
Cow position: chr17:24787241-24786988 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 88, 148

Conread position: 117-366
Cow position: chr17:24587398-24587663 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 86, 160

Conread position: 117-374
Cow position: chr17:9778031-9778290 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 87

Conread position: 118-287
Cow position: chr17:12325965-12325796 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 118-300
Cow position: chr17:27504907-27505086 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 155

Conread position: 118-317
Cow position: chr17:10220262-10220457 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 87, 30

Conread position: 118-361
Cow position: chr17:25128568-25128319 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 85, 61

Conread position: 119-317
Cow position: chr17:29040684-29040484 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 119-362
Cow position: chr17:30713135-30713380 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 85, 61

Conread position: 120-304
Cow position: chr17:33926338-33926156 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 33

Conread position: 120-309
Cow position: chr17:3182801-3182611 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 151
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 84, 28

Conread position: 120-317
Cow position: chr17:21710288-21710486 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 159
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 85, 137

Conread position: 120-317
Cow position: chr17:41290234-41290041 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 105, 28

Conread position: 120-327
Cow position: chr17:11156710-11156497 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 83, 0

Conread position: 121-317
Cow position: chr17:34208036-34207837 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 121-356
Cow position: chr17:21628267-21628508 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 186
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 82, 9

Conread position: 122-308
Cow position: chr17:1328185-1327998 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 81, 26

Conread position: 123-294
Cow position: chr17:21323086-21323251 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 135, 19

Conread position: 123-307
Cow position: chr17:18245861-18246049 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 83, 140

Conread position: 123-308
Cow position: chr17:8279921-8279736 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 25

Conread position: 123-309
Cow position: chr17:25078207-25078028 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 149
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 152, 35

Conread position: 123-317
Cow position: chr17:24580513-24580315 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 80, 25

Conread position: 123-357
Cow position: chr17:32472005-32471761 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 81, 25

Conread position: 123-366
Cow position: chr17:25097249-25097501 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 77, 25

Conread position: 124-362
Cow position: chr17:4225704-4225464 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 81, 102

Conread position: 125-309
Cow position: chr17:1275307-1275498 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 67, 0

Conread position: 125-309
Cow position: chr17:21017582-21017770 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 79, 140

Conread position: 126-317
Cow position: chr17:21755652-21755448 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 126-362
Cow position: chr17:31231325-31231081 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 178
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 88, 173

Conread position: 127-317
Cow position: chr17:20932126-20932311 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 77, 35

Conread position: 127-317
Cow position: chr17:22781482-22781673 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 77, 21

Conread position: 127-317
Cow position: chr17:27765071-27765251 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 147, 70

Conread position: 127-366
Cow position: chr17:966949-966707 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 77, 205

Conread position: 128-327
Cow position: chr17:38646859-38647052 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 76, 20

Conread position: 130-317
Cow position: chr17:33052656-33052841 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 73, 89

Conread position: 130-366
Cow position: chr17:6624051-6624295 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 131-294
Cow position: chr17:20912692-20912851 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 17

Conread position: 131-346
Cow position: chr17:27429372-27429592 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 73, 144

Conread position: 131-366
Cow position: chr17:1035810-1035558 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 131-366
Cow position: chr17:21243992-21243748 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 73, 17

Conread position: 133-327
Cow position: chr17:44232924-44232720 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 144
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 134-366
Cow position: chr17:12447601-12447362 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 175, 33

Conread position: 137-327
Cow position: chr17:5514559-5514754 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 66, 41

Conread position: 139-356
Cow position: chr17:24490323-24490552 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 65, 227

Conread position: 140-308
Cow position: chr17:9911566-9911735 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 45, 146

Conread position: 140-327
Cow position: chr17:21697536-21697731 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 64, 8

Conread position: 140-366
Cow position: chr17:10459133-10458897 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 23

Conread position: 141-327
Cow position: chr17:35311225-35311421 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 63, 152

Conread position: 141-372
Cow position: chr17:12108608-12108849 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 59, 18

Conread position: 142-308
Cow position: chr17:32950077-32950246 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 62, 91

Conread position: 142-317
Cow position: chr17:25999921-26000098 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 62, 93

Conread position: 142-351
Cow position: chr17:4436426-4436211 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 62, 107

Conread position: 142-372
Cow position: chr17:26881532-26881286 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 144-327
Cow position: chr17:37480186-37479998 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 59, 89

Conread position: 144-366
Cow position: chr17:12590971-12591208 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 60, 16

Conread position: 144-373
Cow position: chr17:37857927-37857686 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 208

Conread position: 148-314
Cow position: chr17:24773494-24773658 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 52, 120

Conread position: 148-366
Cow position: chr17:12536657-12536426 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 149-356
Cow position: chr17:908558-908770 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 165
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 55, 104

Conread position: 153-317
Cow position: chr17:8837133-8836968 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 56, 117

Conread position: 155-317
Cow position: chr17:36203672-36203508 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 48, 87

Conread position: 158-360
Cow position: chr17:3442847-3442645 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 46, 163

Conread position: 162-374
Cow position: chr17:24149002-24149231 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 164-364
Cow position: chr17:32273857-32273651 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 146
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 111, 61

Conread position: 166-362
Cow position: chr17:24821695-24821896 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 37, 104

Conread position: 166-374
Cow position: chr17:5398606-5398395 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 147
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 37, 5

Conread position: 176-362
Cow position: chr17:14762280-14762087 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 178-362
Cow position: chr17:24559140-24559325 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 33

Conread position: 179-327
Cow position: chr17:28467978-28468121 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 25, 51

Conread position: 179-362
Cow position: chr17:7142706-7142896 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 180-382
Cow position: chr17:18146025-18146227 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 143

Conread position: 181-375
Cow position: chr17:31701281-31701479 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 22, 146

Conread position: 191-326
Cow position: chr17:14060922-14060781 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 206-374
Cow position: chr17:6328982-6329162 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 206-374
Cow position: chr17:40673256-40673417 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 106

Conread position: 207-350
Cow position: chr17:33411151-33411002 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 58, 138

Conread position: 211-366
Cow position: chr17:20884398-20884562 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 62, 49

Show alignments to all cow chromosomes.