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Cow genome map

           
Conread name:
           
Lym1-jns19bF07.f
        

               
Conread position:
               
1-309
               

               
Cow position:
               
chr18:81355-81656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
10, 53
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr18:10656039-10656343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 90
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr18:13293101-13293410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 122
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr18:31672909-31672604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 58
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr18:36445022-36445347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr18:7950705-7951028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
10, 122
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr18:4540280-4539920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 121
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr18:37002227-37002593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
10, 58
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr18:14815743-14815377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 111
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr18:39002203-39001832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 121
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr18:23630980-23630719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
202, 8
               

               
Conread position:
               
2-304
               

               
Cow position:
               
chr18:34621769-34621465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 9
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr18:20125901-20126213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
202, 9
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr18:26937322-26937631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
121, 9
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr18:51406298-51406001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
9, 62
               

               
Conread position:
               
2-325
               

               
Cow position:
               
chr18:29648384-29648699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
202, 9
               

               
Conread position:
               
2-327
               

               
Cow position:
               
chr18:21195746-21195424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 120
               

               
Conread position:
               
2-364
               

               
Cow position:
               
chr18:29357042-29356668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 8
               

               
Conread position:
               
2-367
               

               
Cow position:
               
chr18:50637865-50637505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
202, 8
               

               
Conread position:
               
3-365
               

               
Cow position:
               
chr18:23766826-23766446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
8, 54
               

               
Conread position:
               
4-374
               

               
Cow position:
               
chr18:17004848-17005233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 88
               

               
Conread position:
               
8-327
               

               
Cow position:
               
chr18:4624829-4624510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 113
               

               
Conread position:
               
10-282
               

               
Cow position:
               
chr18:35535683-35535410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
188, 106
               

               
Conread position:
               
10-302
               

               
Cow position:
               
chr18:52632816-52632508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
92, 278
               

               
Conread position:
               
10-306
               

               
Cow position:
               
chr18:31082737-31082433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 183
               

               
Conread position:
               
10-307
               

               
Cow position:
               
chr18:6290387-6290685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 13
               

               
Conread position:
               
10-308
               

               
Cow position:
               
chr18:50927337-50927637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
61, 178
               

               
Conread position:
               
10-309
               

               
Cow position:
               
chr18:55782824-55782518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 106
               

               
Conread position:
               
10-316
               

               
Cow position:
               
chr18:5190077-5189781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 111
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr18:4315901-4316219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr18:7955750-7956051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
194, 106
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr18:34527505-34527191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
98, 69
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr18:36458536-36458841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 103
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr18:37023954-37023645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 111
               

               
Conread position:
               
10-325
               

               
Cow position:
               
chr18:13172923-13172599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
10-327
               

               
Cow position:
               
chr18:24342228-24342538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 73
               

               
Conread position:
               
10-346
               

               
Cow position:
               
chr18:11618084-11618413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
188, 106
               

               
Conread position:
               
10-350
               

               
Cow position:
               
chr18:19850143-19849808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
45, 102
               

               
Conread position:
               
10-357
               

               
Cow position:
               
chr18:23447476-23447132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 76
               

               
Conread position:
               
10-366
               

               
Cow position:
               
chr18:11866958-11867302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
194, 43
               

               
Conread position:
               
10-366
               

               
Cow position:
               
chr18:33606233-33606596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
10-372
               

               
Cow position:
               
chr18:39709492-39709856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 111
               

               
Conread position:
               
10-372
               

               
Cow position:
               
chr18:43284149-43283785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 91
               

               
Conread position:
               
10-374
               

               
Cow position:
               
chr18:35636745-35636373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 91
               

               
Conread position:
               
11-309
               

               
Cow position:
               
chr18:56361997-56361703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 76
               

               
Conread position:
               
12-308
               

               
Cow position:
               
chr18:16842462-16842164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
93, 110
               

               
Conread position:
               
15-362
               

               
Cow position:
               
chr18:43563835-43564187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
174, 106
               

               
Conread position:
               
17-372
               

               
Cow position:
               
chr18:1144604-1144212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
88, 149
               

               
Conread position:
               
18-309
               

               
Cow position:
               
chr18:21721670-21721377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 103
               

               
Conread position:
               
18-317
               

               
Cow position:
               
chr18:3209332-3209621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
186, 20
               

               
Conread position:
               
18-317
               

               
Cow position:
               
chr18:24022001-24022284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
186, 72
               

               
Conread position:
               
18-317
               

               
Cow position:
               
chr18:29796823-29796517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 82
               

               
Conread position:
               
18-317
               

               
Cow position:
               
chr18:49161846-49161535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 91
               

               
Conread position:
               
18-317
               

               
Cow position:
               
chr18:52635471-52635171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 103
               

               
Conread position:
               
18-317
               

               
Cow position:
               
chr18:55505014-55505315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
167, 78
               

               
Conread position:
               
18-318
               

               
Cow position:
               
chr18:16045390-16045093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
186, 96
               

               
Conread position:
               
18-367
               

               
Cow position:
               
chr18:55702035-55701692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 72
               

               
Conread position:
               
18-374
               

               
Cow position:
               
chr18:39662387-39662752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 180
               

               
Conread position:
               
18-374
               

               
Cow position:
               
chr18:55552575-55552940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 103
               

               
Conread position:
               
19-317
               

               
Cow position:
               
chr18:2270892-2270597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 102
               

               
Conread position:
               
20-316
               

               
Cow position:
               
chr18:7946987-7947295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
171, 101
               

               
Conread position:
               
23-366
               

               
Cow position:
               
chr18:9974709-9974363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 41
               

               
Conread position:
               
25-265
               

               
Cow position:
               
chr18:31003157-31002925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 51
               

               
Conread position:
               
25-301
               

               
Cow position:
               
chr18:18340336-18340076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
25-302
               

               
Cow position:
               
chr18:7486869-7487151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 90
               

               
Conread position:
               
25-308
               

               
Cow position:
               
chr18:45904274-45903995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
179, 35
               

               
Conread position:
               
25-315
               

               
Cow position:
               
chr18:32244405-32244114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
71, 101
               

               
Conread position:
               
25-317
               

               
Cow position:
               
chr18:1594312-1594033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
119, 89
               

               
Conread position:
               
25-317
               

               
Cow position:
               
chr18:3098696-3098410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
25-317
               

               
Cow position:
               
chr18:28767984-28768272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 96
               

               
Conread position:
               
25-327
               

               
Cow position:
               
chr18:26286530-26286831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
66, 74
               

               
Conread position:
               
26-317
               

               
Cow position:
               
chr18:1585485-1585209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
152, 45
               

               
Conread position:
               
29-366
               

               
Cow position:
               
chr18:10575733-10576070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 85
               

               
Conread position:
               
30-305
               

               
Cow position:
               
chr18:33793326-33793603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 188
               

               
Conread position:
               
32-317
               

               
Cow position:
               
chr18:47314674-47314381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 234
               

               
Conread position:
               
34-356
               

               
Cow position:
               
chr18:5486877-5487200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 87
               

               
Conread position:
               
35-273
               

               
Cow position:
               
chr18:29264824-29264590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
177, 86
               

               
Conread position:
               
35-314
               

               
Cow position:
               
chr18:15881227-15880953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 66
               

               
Conread position:
               
35-317
               

               
Cow position:
               
chr18:16044522-16044244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
190, 6
               

               
Conread position:
               
35-317
               

               
Cow position:
               
chr18:28101253-28101539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 86
               

               
Conread position:
               
35-317
               

               
Cow position:
               
chr18:33502745-33502478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
168, 62
               

               
Conread position:
               
35-356
               

               
Cow position:
               
chr18:55396944-55397251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
169, 74
               

               
Conread position:
               
35-359
               

               
Cow position:
               
chr18:7649619-7649945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
184, 306
               

               
Conread position:
               
35-361
               

               
Cow position:
               
chr18:11183569-11183901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
163, 79
               

               
Conread position:
               
35-362
               

               
Cow position:
               
chr18:11790559-11790886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
110, 84
               

               
Conread position:
               
35-366
               

               
Cow position:
               
chr18:47183658-47183328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 81
               

               
Conread position:
               
35-366
               

               
Cow position:
               
chr18:51211793-51212149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
76, 127
               

               
Conread position:
               
35-371
               

               
Cow position:
               
chr18:41270714-41271056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 97
               

               
Conread position:
               
35-374
               

               
Cow position:
               
chr18:49200274-49200606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
168, 74
               

               
Conread position:
               
36-317
               

               
Cow position:
               
chr18:20174502-20174221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 73
               

               
Conread position:
               
36-317
               

               
Cow position:
               
chr18:49665529-49665250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 85
               

               
Conread position:
               
36-327
               

               
Cow position:
               
chr18:49543117-49543395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
168, 32
               

               
Conread position:
               
36-346
               

               
Cow position:
               
chr18:45104819-45104502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 89
               

               
Conread position:
               
36-351
               

               
Cow position:
               
chr18:9010360-9010670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 85
               

               
Conread position:
               
36-362
               

               
Cow position:
               
chr18:12118217-12117887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 80
               

               
Conread position:
               
36-372
               

               
Cow position:
               
chr18:22121252-22120914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 80
               

               
Conread position:
               
37-287
               

               
Cow position:
               
chr18:4672956-4673199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
224, 84
               

               
Conread position:
               
37-308
               

               
Cow position:
               
chr18:19123806-19124078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
37-309
               

               
Cow position:
               
chr18:56168287-56168019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
170, 31
               

               
Conread position:
               
37-317
               

               
Cow position:
               
chr18:55462080-55461800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
106, 84
               

               
Conread position:
               
37-366
               

               
Cow position:
               
chr18:33407251-33407582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
167, 74
               

               
Conread position:
               
39-260
               

               
Cow position:
               
chr18:17108201-17108417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
70, 40
               

               
Conread position:
               
40-263
               

               
Cow position:
               
chr18:37493008-37493228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
164, 77
               

               
Conread position:
               
41-306
               

               
Cow position:
               
chr18:21682335-21682077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
162, 78
               

               
Conread position:
               
41-307
               

               
Cow position:
               
chr18:54646124-54646377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
42-303
               

               
Cow position:
               
chr18:3027731-3027468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
162, 69
               

               
Conread position:
               
42-308
               

               
Cow position:
               
chr18:2609099-2608827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 252
               

               
Conread position:
               
42-309
               

               
Cow position:
               
chr18:29387865-29388119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
162, 34
               

               
Conread position:
               
42-309
               

               
Cow position:
               
chr18:48407424-48407691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 13
               

               
Conread position:
               
42-317
               

               
Cow position:
               
chr18:9818474-9818746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
162, 59
               

               
Conread position:
               
42-366
               

               
Cow position:
               
chr18:11831777-11832085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
162, 21
               

               
Conread position:
               
42-366
               

               
Cow position:
               
chr18:20641846-20641531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
162, 37
               

               
Conread position:
               
42-366
               

               
Cow position:
               
chr18:29058858-29058529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 61
               

               
Conread position:
               
42-367
               

               
Cow position:
               
chr18:50082602-50082291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
107, 21
               

               
Conread position:
               
43-299
               

               
Cow position:
               
chr18:45395628-45395896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 204
               

               
Conread position:
               
46-307
               

               
Cow position:
               
chr18:20195865-20195603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
158, 68
               

               
Conread position:
               
49-317
               

               
Cow position:
               
chr18:3180061-3180328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 45
               

               
Conread position:
               
49-325
               

               
Cow position:
               
chr18:4666567-4666293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 59
               

               
Conread position:
               
49-362
               

               
Cow position:
               
chr18:10954122-10954429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
155, 34
               

               
Conread position:
               
49-374
               

               
Cow position:
               
chr18:51826932-51827254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 72
               

               
Conread position:
               
50-317
               

               
Cow position:
               
chr18:56151013-56150742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
153, 16
               

               
Conread position:
               
55-317
               

               
Cow position:
               
chr18:7359384-7359653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 46
               

               
Conread position:
               
56-366
               

               
Cow position:
               
chr18:35797269-35797589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
54, 94
               

               
Conread position:
               
59-298
               

               
Cow position:
               
chr18:11811628-11811865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
144, 115
               

               
Conread position:
               
61-317
               

               
Cow position:
               
chr18:49100717-49100462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
68-309
               

               
Cow position:
               
chr18:8105283-8105046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
75, 53
               

               
Conread position:
               
71-366
               

               
Cow position:
               
chr18:19619613-19619907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
78-374
               

               
Cow position:
               
chr18:52637864-52637556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
36, 267
               

               
Conread position:
               
81-307
               

               
Cow position:
               
chr18:9365585-9365814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 40
               

               
Conread position:
               
81-359
               

               
Cow position:
               
chr18:6881664-6881395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
237, 9
               

               
Conread position:
               
81-366
               

               
Cow position:
               
chr18:29958473-29958199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 40
               

               
Conread position:
               
87-365
               

               
Cow position:
               
chr18:6275495-6275775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
116, 34
               

               
Conread position:
               
90-355
               

               
Cow position:
               
chr18:4380977-4381244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
227, 31
               

               
Conread position:
               
90-356
               

               
Cow position:
               
chr18:3133060-3132802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
230, 30
               

               
Conread position:
               
91-317
               

               
Cow position:
               
chr18:52382380-52382607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
15, 20
               

               
Conread position:
               
92-301
               

               
Cow position:
               
chr18:1733507-1733301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
166, 29
               

               
Conread position:
               
94-358
               

               
Cow position:
               
chr18:12113681-12113422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
110, 23
               

               
Conread position:
               
95-302
               

               
Cow position:
               
chr18:44484071-44483858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
109, 19
               

               
Conread position:
               
96-317
               

               
Cow position:
               
chr18:26998552-26998788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
108, 25
               

               
Conread position:
               
96-365
               

               
Cow position:
               
chr18:44549219-44548956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
220, 25
               

               
Conread position:
               
97-350
               

               
Cow position:
               
chr18:43823264-43823006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
106, 24
               

               
Conread position:
               
100-264
               

               
Cow position:
               
chr18:5742744-5742581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
92, 16
               

               
Conread position:
               
105-317
               

               
Cow position:
               
chr18:4858212-4857995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
107-348
               

               
Cow position:
               
chr18:39875561-39875315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
108-317
               

               
Cow position:
               
chr18:11166677-11166888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
108-327
               

               
Cow position:
               
chr18:46048463-46048680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
96, 27
               

               
Conread position:
               
108-328
               

               
Cow position:
               
chr18:50700363-50700589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 181
               

               
Conread position:
               
108-366
               

               
Cow position:
               
chr18:2592475-2592218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
96, 217
               

               
Conread position:
               
109-296
               

               
Cow position:
               
chr18:33843363-33843166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
34, 167
               

               
Conread position:
               
109-306
               

               
Cow position:
               
chr18:4649036-4648844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
159, 95
               

               
Conread position:
               
109-317
               

               
Cow position:
               
chr18:4578770-4578560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
94, 169
               

               
Conread position:
               
109-317
               

               
Cow position:
               
chr18:36477899-36478107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
93, 15
               

               
Conread position:
               
109-327
               

               
Cow position:
               
chr18:20127403-20127187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
94, 39
               

               
Conread position:
               
109-357
               

               
Cow position:
               
chr18:23808174-23807918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
94, 130
               

               
Conread position:
               
110-317
               

               
Cow position:
               
chr18:47931160-47930957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
163, 88
               

               
Conread position:
               
111-366
               

               
Cow position:
               
chr18:21266209-21266471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
81, 201
               

               
Conread position:
               
111-366
               

               
Cow position:
               
chr18:32873285-32873556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
92, 5
               

               
Conread position:
               
112-327
               

               
Cow position:
               
chr18:13359764-13359985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 63
               

               
Conread position:
               
113-308
               

               
Cow position:
               
chr18:30794136-30794333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
113-317
               

               
Cow position:
               
chr18:3115163-3115371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 35
               

               
Conread position:
               
113-376
               

               
Cow position:
               
chr18:5578007-5578271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
92, 27
               

               
Conread position:
               
114-373
               

               
Cow position:
               
chr18:56145380-56145644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 178
               

               
Conread position:
               
116-309
               

               
Cow position:
               
chr18:9557687-9557883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
88, 32
               

               
Conread position:
               
116-317
               

               
Cow position:
               
chr18:39115438-39115231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
116-351
               

               
Cow position:
               
chr18:42455314-42455080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
87, 54
               

               
Conread position:
               
116-362
               

               
Cow position:
               
chr18:55789286-55789033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
88, 157
               

               
Conread position:
               
117-302
               

               
Cow position:
               
chr18:3422427-3422614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
86, 110
               

               
Conread position:
               
117-309
               

               
Cow position:
               
chr18:25206485-25206290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
87, 156
               

               
Conread position:
               
117-317
               

               
Cow position:
               
chr18:5646957-5647156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
87, 31
               

               
Conread position:
               
117-336
               

               
Cow position:
               
chr18:47868162-47868386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
87, 209
               

               
Conread position:
               
117-343
               

               
Cow position:
               
chr18:25647542-25647313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
87, 31
               

               
Conread position:
               
117-366
               

               
Cow position:
               
chr18:11680427-11680689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
118-308
               

               
Cow position:
               
chr18:15614136-15613961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
157, 16
               

               
Conread position:
               
118-308
               

               
Cow position:
               
chr18:47517500-47517312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
86, 30
               

               
Conread position:
               
118-317
               

               
Cow position:
               
chr18:20271312-20271112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
85, 142
               

               
Conread position:
               
118-327
               

               
Cow position:
               
chr18:268103-267896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
155, 102
               

               
Conread position:
               
118-366
               

               
Cow position:
               
chr18:18919245-18918993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
142, 83
               

               
Conread position:
               
119-383
               

               
Cow position:
               
chr18:46453170-46452900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 212
               

               
Conread position:
               
120-283
               

               
Cow position:
               
chr18:54658011-54658173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
120-317
               

               
Cow position:
               
chr18:16847408-16847600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 99
               

               
Conread position:
               
120-355
               

               
Cow position:
               
chr18:38985397-38985642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
121-317
               

               
Cow position:
               
chr18:56159176-56159369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
83, 48
               

               
Conread position:
               
123-306
               

               
Cow position:
               
chr18:4369067-4368879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
81, 152
               

               
Conread position:
               
123-327
               

               
Cow position:
               
chr18:55498779-55498989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
123-372
               

               
Cow position:
               
chr18:25282842-25282582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
124-283
               

               
Cow position:
               
chr18:2439007-2438848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
79, 24
               

               
Conread position:
               
124-296
               

               
Cow position:
               
chr18:56163301-56163474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
126-352
               

               
Cow position:
               
chr18:48453410-48453631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
77, 9
               

               
Conread position:
               
126-366
               

               
Cow position:
               
chr18:28924116-28923882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
23, 43
               

               
Conread position:
               
128-308
               

               
Cow position:
               
chr18:5247801-5247608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
128-317
               

               
Cow position:
               
chr18:24946093-24945900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
76, 24
               

               
Conread position:
               
128-361
               

               
Cow position:
               
chr18:56183656-56183894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 21
               

               
Conread position:
               
129-383
               

               
Cow position:
               
chr18:52864597-52864338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
74, 193
               

               
Conread position:
               
131-351
               

               
Cow position:
               
chr18:11691689-11691462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
73, 16
               

               
Conread position:
               
135-309
               

               
Cow position:
               
chr18:5711943-5711767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
15, 91
               

               
Conread position:
               
135-317
               

               
Cow position:
               
chr18:3044155-3044349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
9, 28
               

               
Conread position:
               
139-317
               

               
Cow position:
               
chr18:21773218-21773405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
140-281
               

               
Cow position:
               
chr18:20797831-20797971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
142-372
               

               
Cow position:
               
chr18:7952378-7952610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
62, 197
               

               
Conread position:
               
143-317
               

               
Cow position:
               
chr18:21768360-21768539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 100
               

               
Conread position:
               
147-327
               

               
Cow position:
               
chr18:35582365-35582180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
57, 124
               

               
Conread position:
               
147-362
               

               
Cow position:
               
chr18:12023896-12023675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
148-318
               

               
Cow position:
               
chr18:10322538-10322715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
148-366
               

               
Cow position:
               
chr18:7058967-7059187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
149-327
               

               
Cow position:
               
chr18:37382359-37382172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
162-317
               

               
Cow position:
               
chr18:32883053-32883214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
162-374
               

               
Cow position:
               
chr18:21205118-21205337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
42, 57
               

               
Conread position:
               
163-366
               

               
Cow position:
               
chr18:20482121-20481917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 80
               

               
Conread position:
               
166-360
               

               
Cow position:
               
chr18:12809615-12809813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
38, 68
               

               
Conread position:
               
168-362
               

               
Cow position:
               
chr18:17391216-17391032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
171-317
               

               
Cow position:
               
chr18:28823208-28823059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
179-317
               

               
Cow position:
               
chr18:219101-219242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
179-346
               

               
Cow position:
               
chr18:15340671-15340503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
137, 20
               

               
Conread position:
               
204-317
               

               
Cow position:
               
chr18:7108920-7109036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               
Show alignments to all cow chromosomes.