Cow genome map

Conread name: Lym1-jns19bF07.f

Conread position: 1-346
Cow position:
Alignm length: 352
Alignm identity: 245
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 10, 108

Conread position: 1-372
Cow position:
Alignm length: 378
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 118

Conread position: 2-306
Cow position:
Alignm length: 311
Alignm identity: 219
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 120, 7

Conread position: 2-308
Cow position:
Alignm length: 309
Alignm identity: 214
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 201, 96

Conread position: 2-317
Cow position:
Alignm length: 322
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 8

Conread position: 2-327
Cow position:
Alignm length: 335
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 8

Conread position: 3-326
Cow position:
Alignm length: 340
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 92

Conread position: 10-281
Cow position:
Alignm length: 282
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 91

Conread position: 10-308
Cow position:
Alignm length: 301
Alignm identity: 208
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 194, 92

Conread position: 10-309
Cow position:
Alignm length: 319
Alignm identity: 227
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 98, 260

Conread position: 10-315
Cow position:
Alignm length: 312
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 111

Conread position: 10-317
Cow position:
Alignm length: 313
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 93

Conread position: 10-317
Cow position:
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 107

Conread position: 10-317
Cow position:
Alignm length: 313
Alignm identity: 223
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 208, 69

Conread position: 10-360
Cow position:
Alignm length: 364
Alignm identity: 252
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 194, 93

Conread position: 10-362
Cow position:
Alignm length: 362
Alignm identity: 252
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 139, 53

Conread position: 10-366
Cow position:
Alignm length: 378
Alignm identity: 255
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 99, 181

Conread position: 10-366
Cow position:
Alignm length: 367
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 24

Conread position: 11-374
Cow position:
Alignm length: 370
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 110

Conread position: 15-316
Cow position:
Alignm length: 308
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 40

Conread position: 16-366
Cow position:
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 54

Conread position: 18-305
Cow position:
Alignm length: 289
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 18

Conread position: 18-368
Cow position:
Alignm length: 372
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 276

Conread position: 18-375
Cow position:
Alignm length: 369
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 103

Conread position: 25-348
Cow position:
Alignm length: 335
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 99

Conread position: 26-283
Cow position:
Alignm length: 260
Alignm identity: 190
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 234, 95

Conread position: 26-369
Cow position:
Alignm length: 357
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 80

Conread position: 35-261
Cow position:
Alignm length: 228
Alignm identity: 158
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 169, 23

Conread position: 35-300
Cow position:
Alignm length: 271
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 86

Conread position: 35-304
Cow position:
Alignm length: 271
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 76

Conread position: 35-308
Cow position:
Alignm length: 281
Alignm identity: 188
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 86

Conread position: 35-308
Cow position:
Alignm length: 276
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 82

Conread position: 35-309
Cow position:
Alignm length: 279
Alignm identity: 189
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 169, 49

Conread position: 35-316
Cow position:
Alignm length: 290
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 32

Conread position: 35-327
Cow position:
Alignm length: 303
Alignm identity: 202
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 28, 38

Conread position: 35-366
Cow position:
Alignm length: 346
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 86

Conread position: 35-366
Cow position:
Alignm length: 345
Alignm identity: 236
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 32, 98

Conread position: 35-366
Cow position:
Alignm length: 339
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 72

Conread position: 35-372
Cow position:
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 81

Conread position: 35-376
Cow position:
Alignm length: 343
Alignm identity: 229
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 314, 80

Conread position: 36-307
Cow position:
Alignm length: 277
Alignm identity: 194
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 87, 43

Conread position: 36-317
Cow position:
Alignm length: 285
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 73

Conread position: 36-356
Cow position:
Alignm length: 331
Alignm identity: 235
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 167, 63

Conread position: 37-308
Cow position:
Alignm length: 273
Alignm identity: 184
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 167, 71

Conread position: 37-317
Cow position:
Alignm length: 289
Alignm identity: 203
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 115, 79

Conread position: 37-366
Cow position:
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 85

Conread position: 39-366
Cow position:
Alignm length: 340
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 78

Conread position: 41-317
Cow position:
Alignm length: 281
Alignm identity: 204
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 71, 110

Conread position: 42-317
Cow position:
Alignm length: 281
Alignm identity: 205
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 161, 61

Conread position: 42-366
Cow position:
Alignm length: 341
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 119

Conread position: 42-367
Cow position:
Alignm length: 335
Alignm identity: 236
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 162, 51

Conread position: 46-308
Cow position:
Alignm length: 272
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 46-374
Cow position:
Alignm length: 339
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 75

Conread position: 50-366
Cow position:
Alignm length: 328
Alignm identity: 233
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 154, 45

Conread position: 57-365
Cow position:
Alignm length: 319
Alignm identity: 224
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 146, 64

Conread position: 57-375
Cow position:
Alignm length: 336
Alignm identity: 241
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 147, 64

Conread position: 64-317
Cow position:
Alignm length: 264
Alignm identity: 192
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 140, 44

Conread position: 66-298
Cow position:
Alignm length: 234
Alignm identity: 165
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 208, 55

Conread position: 68-350
Cow position:
Alignm length: 287
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 53

Conread position: 71-309
Cow position:
Alignm length: 240
Alignm identity: 172
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 134, 30

Conread position: 71-317
Cow position:
Alignm length: 254
Alignm identity: 193
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 133, 30

Conread position: 79-316
Cow position:
Alignm length: 242
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 66, 192

Conread position: 81-318
Cow position:
Alignm length: 243
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 40

Conread position: 82-317
Cow position:
Alignm length: 240
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 27

Conread position: 83-351
Cow position:
Alignm length: 278
Alignm identity: 210
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 122, 38

Conread position: 90-300
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 26, 59

Conread position: 90-317
Cow position:
Alignm length: 231
Alignm identity: 176
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 113, 27

Conread position: 92-362
Cow position:
Alignm length: 274
Alignm identity: 201
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 211, 29

Conread position: 98-309
Cow position:
Alignm length: 225
Alignm identity: 165
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 98-316
Cow position:
Alignm length: 222
Alignm identity: 164
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 162, 18

Conread position: 99-308
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 107, 17

Conread position: 107-352
Cow position:
Alignm length: 254
Alignm identity: 193
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 97, 14

Conread position: 108-300
Cow position:
Alignm length: 197
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 71

Conread position: 108-366
Cow position:
Alignm length: 271
Alignm identity: 192
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 17, 54

Conread position: 108-372
Cow position:
Alignm length: 278
Alignm identity: 200
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 97, 116

Conread position: 109-366
Cow position:
Alignm length: 270
Alignm identity: 196
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 14, 0

Conread position: 111-317
Cow position:
Alignm length: 213
Alignm identity: 165
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 93, 5

Conread position: 111-326
Cow position:
Alignm length: 220
Alignm identity: 160
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 93, 101

Conread position: 111-327
Cow position:
Alignm length: 222
Alignm identity: 165
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 38

Conread position: 111-374
Cow position:
Alignm length: 271
Alignm identity: 200
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 92, 108

Conread position: 112-366
Cow position:
Alignm length: 270
Alignm identity: 192
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 92, 144

Conread position: 113-327
Cow position:
Alignm length: 221
Alignm identity: 151
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 117-308
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 86, 167

Conread position: 117-317
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 86, 174

Conread position: 117-347
Cow position:
Alignm length: 242
Alignm identity: 183
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 32, 109

Conread position: 118-309
Cow position:
Alignm length: 201
Alignm identity: 147
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 11, 154

Conread position: 119-309
Cow position:
Alignm length: 193
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 86, 29

Conread position: 120-366
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 85, 110

Conread position: 121-374
Cow position:
Alignm length: 257
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 115

Conread position: 123-307
Cow position:
Alignm length: 188
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 123-317
Cow position:
Alignm length: 198
Alignm identity: 155
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 80, 0

Conread position: 123-317
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 141, 73

Conread position: 123-317
Cow position:
Alignm length: 197
Alignm identity: 146
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 141, 73

Conread position: 123-327
Cow position:
Alignm length: 209
Alignm identity: 153
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 141, 55

Conread position: 124-300
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 24

Conread position: 124-317
Cow position:
Alignm length: 202
Alignm identity: 142
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 125-327
Cow position:
Alignm length: 208
Alignm identity: 143
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 138

Conread position: 125-354
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 24, 151

Conread position: 126-348
Cow position:
Alignm length: 231
Alignm identity: 173
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 78, 22

Conread position: 128-317
Cow position:
Alignm length: 192
Alignm identity: 142
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 76, 55

Conread position: 128-327
Cow position:
Alignm length: 204
Alignm identity: 148
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 75

Conread position: 128-369
Cow position:
Alignm length: 250
Alignm identity: 183
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 147, 21

Conread position: 131-317
Cow position:
Alignm length: 190
Alignm identity: 142
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 72, 17

Conread position: 133-350
Cow position:
Alignm length: 229
Alignm identity: 173
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 71, 15

Conread position: 134-366
Cow position:
Alignm length: 243
Alignm identity: 177
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 116, 70

Conread position: 138-325
Cow position:
Alignm length: 194
Alignm identity: 149
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 120, 10

Conread position: 138-374
Cow position:
Alignm length: 255
Alignm identity: 177
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 140-304
Cow position:
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 143

Conread position: 142-309
Cow position:
Alignm length: 169
Alignm identity: 127
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 62, 84

Conread position: 142-366
Cow position:
Alignm length: 235
Alignm identity: 168
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 149, 144

Conread position: 148-317
Cow position:
Alignm length: 173
Alignm identity: 130
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 149-372
Cow position:
Alignm length: 236
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 126

Conread position: 153-317
Cow position:
Alignm length: 169
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 50, 88

Conread position: 162-317
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 60

Conread position: 175-316
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 34

Conread position: 179-317
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 180-348
Cow position:
Alignm length: 172
Alignm identity: 134
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 24, 0

Conread position: 185-329
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 0

Show alignments to all cow chromosomes.