Cow genome map

Conread name: Lym1-jns19bF07.f

Conread position: 1-290
Cow position: chr3:58951222-58951511 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 121

Conread position: 1-307
Cow position: chr3:5851326-5851016 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 121

Conread position: 1-308
Cow position: chr3:48370732-48371043 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 215
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 11, 121

Conread position: 1-308
Cow position: chr3:69962109-69961806 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 110

Conread position: 1-309
Cow position: chr3:29887823-29887513 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 18

Conread position: 1-309
Cow position: chr3:75479620-75479911 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 207
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 203, 65

Conread position: 1-309
Cow position: chr3:77496418-77496730 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 92

Conread position: 1-317
Cow position: chr3:9641149-9641482 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 226
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 10, 0

Conread position: 1-317
Cow position: chr3:16004383-16004073 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 86

Conread position: 1-317
Cow position: chr3:34270535-34270832 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 22, 101

Conread position: 1-317
Cow position: chr3:52148072-52147753 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 231
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 202, 9

Conread position: 1-317
Cow position: chr3:80740192-80740480 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 218
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 10, 86

Conread position: 1-327
Cow position: chr3:35852866-35852545 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 10

Conread position: 1-357
Cow position: chr3:61678290-61678655 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 123

Conread position: 1-362
Cow position: chr3:49327548-49327914 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 55

Conread position: 1-362
Cow position: chr3:50768276-50768649 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 118

Conread position: 1-362
Cow position: chr3:70566137-70565768 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 121

Conread position: 1-371
Cow position: chr3:2630396-2630770 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 265
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 10, 94

Conread position: 1-372
Cow position: chr3:14552481-14552855 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 46

Conread position: 1-375
Cow position: chr3:57554242-57553865 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 9

Conread position: 2-265
Cow position: chr3:3776638-3776903 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 190
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 136, 9

Conread position: 2-294
Cow position: chr3:17937247-17936941 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 215
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 123, 7

Conread position: 2-300
Cow position: chr3:75143427-75143137 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 203, 9

Conread position: 2-314
Cow position: chr3:68342653-68342339 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 9, 121

Conread position: 2-317
Cow position: chr3:8148060-8147751 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 227
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 9, 93

Conread position: 2-317
Cow position: chr3:18393778-18393471 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 9

Conread position: 2-317
Cow position: chr3:21341359-21341045 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 8

Conread position: 2-317
Cow position: chr3:31047339-31047034 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 119

Conread position: 2-317
Cow position: chr3:42423732-42423416 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 123

Conread position: 2-317
Cow position: chr3:48252499-48252801 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 9

Conread position: 2-317
Cow position: chr3:59691509-59691814 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 8

Conread position: 2-317
Cow position: chr3:68586643-68586937 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 231
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 9, 100

Conread position: 2-326
Cow position: chr3:80581281-80581593 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 8

Conread position: 2-327
Cow position: chr3:79208387-79208068 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 247
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 9, 42

Conread position: 2-333
Cow position: chr3:15655540-15655212 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 201, 8

Conread position: 2-346
Cow position: chr3:48296315-48296661 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 243
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 202, 7

Conread position: 2-366
Cow position: chr3:23169466-23169089 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 8

Conread position: 2-366
Cow position: chr3:45881509-45881872 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 9

Conread position: 2-366
Cow position: chr3:55272428-55272071 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 8

Conread position: 2-366
Cow position: chr3:80053929-80053567 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 9

Conread position: 2-372
Cow position: chr3:72675692-72676071 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 9

Conread position: 2-373
Cow position: chr3:14626546-14626175 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 7

Conread position: 2-374
Cow position: chr3:67929667-67929278 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 8

Conread position: 2-380
Cow position: chr3:82460773-82461168 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 72

Conread position: 3-291
Cow position: chr3:22908227-22907940 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 98

Conread position: 3-303
Cow position: chr3:66374932-66375219 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 8, 93

Conread position: 3-317
Cow position: chr3:42177759-42178075 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 231
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 8, 123

Conread position: 3-317
Cow position: chr3:55085586-55085260 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 25

Conread position: 3-327
Cow position: chr3:39328015-39328325 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 239
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 8, 118

Conread position: 3-351
Cow position: chr3:48241225-48241574 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 119

Conread position: 3-354
Cow position: chr3:7408088-7408445 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 246
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 200, 40

Conread position: 3-365
Cow position: chr3:26903720-26904083 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 114

Conread position: 3-366
Cow position: chr3:27544729-27544360 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 8

Conread position: 3-384
Cow position: chr3:3164887-3164502 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 7

Conread position: 4-327
Cow position: chr3:60892235-60892552 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 23, 83

Conread position: 4-359
Cow position: chr3:19708494-19708137 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 96

Conread position: 4-366
Cow position: chr3:61278518-61278885 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 263
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 7, 38

Conread position: 9-298
Cow position: chr3:1830955-1830671 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 204
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 167, 0

Conread position: 10-306
Cow position: chr3:54340798-54340506 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 210
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 143, 12

Conread position: 10-308
Cow position: chr3:51147053-51146753 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 215
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 194, 50

Conread position: 10-308
Cow position: chr3:66738384-66738686 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 207
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 194, 106

Conread position: 10-308
Cow position: chr3:77226933-77227230 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 220
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 194, 79

Conread position: 10-309
Cow position: chr3:26894282-26894570 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 91

Conread position: 10-311
Cow position: chr3:46753621-46753926 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 201
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 98, 0

Conread position: 10-317
Cow position: chr3:997565-997878 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 211
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 84, 111

Conread position: 10-317
Cow position: chr3:2903685-2903381 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 228
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 118, 19

Conread position: 10-317
Cow position: chr3:3032012-3032322 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 88

Conread position: 10-317
Cow position: chr3:15662087-15661783 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 91

Conread position: 10-317
Cow position: chr3:53588781-53588469 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 208, 252

Conread position: 10-325
Cow position: chr3:11333702-11333385 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 193, 47

Conread position: 10-327
Cow position: chr3:2506868-2506546 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 101

Conread position: 10-327
Cow position: chr3:22872441-22872117 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 111

Conread position: 10-327
Cow position: chr3:44535149-44534830 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 224
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 205, 114

Conread position: 10-327
Cow position: chr3:79592277-79591952 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 94

Conread position: 10-347
Cow position: chr3:14263006-14263347 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 91

Conread position: 10-351
Cow position: chr3:65968772-65969118 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 8

Conread position: 10-358
Cow position: chr3:31419307-31419664 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 215

Conread position: 10-366
Cow position: chr3:9843189-9843561 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 142

Conread position: 10-366
Cow position: chr3:66610227-66609868 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 114

Conread position: 10-367
Cow position: chr3:26920510-26920884 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 66

Conread position: 10-369
Cow position: chr3:49649992-49650365 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 61

Conread position: 10-369
Cow position: chr3:53384672-53384321 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 51

Conread position: 10-369
Cow position: chr3:76173051-76172691 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 111

Conread position: 10-372
Cow position: chr3:45523876-45524247 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 93

Conread position: 10-372
Cow position: chr3:72390694-72391062 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 128

Conread position: 10-374
Cow position: chr3:15954465-15954103 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 53

Conread position: 10-374
Cow position: chr3:27285840-27286213 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 76

Conread position: 10-374
Cow position: chr3:48530249-48530618 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 111

Conread position: 10-375
Cow position: chr3:33698336-33698714 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 88

Conread position: 10-375
Cow position: chr3:71231017-71231379 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 101

Conread position: 10-381
Cow position: chr3:55117357-55116987 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 26

Conread position: 11-264
Cow position: chr3:50329463-50329211 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 105

Conread position: 11-368
Cow position: chr3:8716859-8717218 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 110

Conread position: 11-378
Cow position: chr3:12255092-12255449 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 242
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 186, 110

Conread position: 12-277
Cow position: chr3:68357759-68357497 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 178
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 64

Conread position: 15-344
Cow position: chr3:68146208-68145902 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 246
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 95, 64

Conread position: 18-317
Cow position: chr3:46350266-46350587 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 226
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 67, 0

Conread position: 18-317
Cow position: chr3:59514742-59515020 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 223
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 186, 51

Conread position: 18-374
Cow position: chr3:31056383-31056031 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 103

Conread position: 19-315
Cow position: chr3:30179704-30179996 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 97

Conread position: 19-350
Cow position: chr3:82056488-82056159 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 242
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 185, 52

Conread position: 19-375
Cow position: chr3:2674649-2675012 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 101

Conread position: 25-279
Cow position: chr3:79690880-79691123 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 179, 97

Conread position: 25-300
Cow position: chr3:77188075-77188338 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 199
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 249, 71

Conread position: 25-308
Cow position: chr3:74849412-74849136 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 179, 86

Conread position: 25-316
Cow position: chr3:65413661-65413364 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 84, 133

Conread position: 25-317
Cow position: chr3:31206499-31206792 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 46

Conread position: 25-317
Cow position: chr3:79220476-79220771 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 21

Conread position: 25-327
Cow position: chr3:18066760-18067065 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 91

Conread position: 25-327
Cow position: chr3:41367357-41367056 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 91

Conread position: 25-327
Cow position: chr3:80655088-80655380 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 201
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 124, 79

Conread position: 25-366
Cow position: chr3:53221654-53221986 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 245
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 180, 63

Conread position: 25-369
Cow position: chr3:364582-364235 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 256
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 178, 32

Conread position: 25-374
Cow position: chr3:6689621-6689982 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 29, 34

Conread position: 25-374
Cow position: chr3:20129573-20129917 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 54

Conread position: 25-374
Cow position: chr3:31298531-31298181 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 82

Conread position: 25-374
Cow position: chr3:53593073-53592707 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 74

Conread position: 25-374
Cow position: chr3:61539423-61539788 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 73

Conread position: 25-375
Cow position: chr3:75727963-75727601 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 96

Conread position: 25-383
Cow position: chr3:49230641-49231009 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 86

Conread position: 26-352
Cow position: chr3:56059414-56059767 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 64, 0

Conread position: 28-302
Cow position: chr3:41947485-41947215 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 203
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 176, 52

Conread position: 30-317
Cow position: chr3:79884855-79884565 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 91

Conread position: 31-279
Cow position: chr3:7763299-7763545 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 118, 40

Conread position: 33-317
Cow position: chr3:83816167-83815873 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 82, 232

Conread position: 34-317
Cow position: chr3:72054-72330 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 31, 6

Conread position: 34-366
Cow position: chr3:58969253-58968929 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 238
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 221, 34

Conread position: 35-263
Cow position: chr3:40101035-40100808 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 35

Conread position: 35-287
Cow position: chr3:68514913-68514672 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 195
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 238, 86

Conread position: 35-294
Cow position: chr3:21302795-21302539 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 114, 86

Conread position: 35-308
Cow position: chr3:15687885-15687612 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 124, 81

Conread position: 35-308
Cow position: chr3:22676443-22676183 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 194
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 66, 0

Conread position: 35-309
Cow position: chr3:8557145-8556876 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 199
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 240, 87

Conread position: 35-317
Cow position: chr3:12712287-12712001 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 76

Conread position: 35-317
Cow position: chr3:49461301-49461013 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 79

Conread position: 35-317
Cow position: chr3:74499876-74500155 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 169, 54

Conread position: 35-317
Cow position: chr3:80082181-80081906 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 169, 86

Conread position: 35-318
Cow position: chr3:2483092-2483364 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 66

Conread position: 35-327
Cow position: chr3:23277906-23277613 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 108, 66

Conread position: 35-327
Cow position: chr3:80564597-80564893 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 222
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 76, 44

Conread position: 35-346
Cow position: chr3:50614281-50614588 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 171, 81

Conread position: 35-351
Cow position: chr3:26554078-26553760 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 225
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 86, 118

Conread position: 35-351
Cow position: chr3:36672368-36672036 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 33

Conread position: 35-362
Cow position: chr3:61191281-61190954 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 241
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 239, 81

Conread position: 35-366
Cow position: chr3:5101124-5100798 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 86

Conread position: 35-366
Cow position: chr3:28908567-28908229 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 247
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 84, 170

Conread position: 35-366
Cow position: chr3:61839927-61840253 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 245
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 240, 75

Conread position: 35-366
Cow position: chr3:79292471-79292803 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 75

Conread position: 35-367
Cow position: chr3:75710949-75711281 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 117

Conread position: 35-368
Cow position: chr3:31500991-31501324 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 52

Conread position: 35-374
Cow position: chr3:59001109-59000770 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 72

Conread position: 36-294
Cow position: chr3:58158815-58158569 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 168, 55

Conread position: 36-299
Cow position: chr3:37486151-37485879 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 65, 76

Conread position: 37-263
Cow position: chr3:37580686-37580451 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 42

Conread position: 37-296
Cow position: chr3:79905274-79905022 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 201
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 167, 84

Conread position: 37-308
Cow position: chr3:20471728-20471455 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 200
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 46, 39

Conread position: 37-308
Cow position: chr3:33327332-33327613 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 203
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 71, 122

Conread position: 37-323
Cow position: chr3:5420225-5419938 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 167, 31

Conread position: 37-333
Cow position: chr3:54782373-54782081 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 221
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 110, 71

Conread position: 37-342
Cow position: chr3:15685272-15684980 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 162, 84

Conread position: 37-363
Cow position: chr3:13352998-13353335 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 246
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 167, 81

Conread position: 37-366
Cow position: chr3:31771338-31771656 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 234
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 166, 84

Conread position: 37-366
Cow position: chr3:57763845-57764196 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 242

Conread position: 38-317
Cow position: chr3:49218668-49218397 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 83

Conread position: 38-327
Cow position: chr3:45312691-45312979 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 110

Conread position: 38-327
Cow position: chr3:47284479-47284765 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 74

Conread position: 39-264
Cow position: chr3:58286255-58286034 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 166, 54

Conread position: 41-264
Cow position: chr3:32772878-32773098 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 151, 75

Conread position: 41-366
Cow position: chr3:69751059-69750737 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 108, 70

Conread position: 41-374
Cow position: chr3:52017402-52017753 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 80

Conread position: 42-309
Cow position: chr3:81371299-81371554 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 197
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 74, 0

Conread position: 42-317
Cow position: chr3:53270463-53270746 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 88

Conread position: 43-362
Cow position: chr3:53149970-53150295 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 79

Conread position: 44-317
Cow position: chr3:17952301-17952573 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 70

Conread position: 44-327
Cow position: chr3:72018768-72019043 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 77

Conread position: 46-317
Cow position: chr3:11640084-11640350 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 47

Conread position: 47-327
Cow position: chr3:25691395-25691684 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 26, 12

Conread position: 48-358
Cow position: chr3:11254503-11254195 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 230
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 92, 73

Conread position: 49-259
Cow position: chr3:59604521-59604731 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 178, 72

Conread position: 49-317
Cow position: chr3:61361067-61361323 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 202
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 154, 46

Conread position: 49-346
Cow position: chr3:12323718-12324024 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 224
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 169, 67

Conread position: 51-308
Cow position: chr3:81471446-81471187 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 13, 51

Conread position: 51-317
Cow position: chr3:56637311-56637585 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 239

Conread position: 51-327
Cow position: chr3:31903456-31903184 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 198
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 208, 70

Conread position: 51-365
Cow position: chr3:70895699-70896017 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 20

Conread position: 52-321
Cow position: chr3:17222498-17222223 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 54-251
Cow position: chr3:41053471-41053664 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 156
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 151, 17

Conread position: 54-317
Cow position: chr3:15052286-15052035 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 67, 5

Conread position: 56-309
Cow position: chr3:22954192-22953950 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 148, 68

Conread position: 57-317
Cow position: chr3:66708414-66708154 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 69, 34

Conread position: 57-366
Cow position: chr3:80071775-80072103 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 241
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 147, 64

Conread position: 59-351
Cow position: chr3:22924742-22924455 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 198
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 49

Conread position: 60-308
Cow position: chr3:4222980-4223221 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 96, 33

Conread position: 60-310
Cow position: chr3:48852300-48852051 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 143, 33

Conread position: 60-346
Cow position: chr3:61857157-61857445 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 61

Conread position: 66-258
Cow position: chr3:13350585-13350774 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 78, 7

Conread position: 66-372
Cow position: chr3:61171835-61171528 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 139, 48

Conread position: 68-327
Cow position: chr3:83920870-83921127 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 33

Conread position: 71-317
Cow position: chr3:31309690-31309437 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 32, 0

Conread position: 71-317
Cow position: chr3:82657413-82657168 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 183
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 132, 40

Conread position: 71-318
Cow position: chr3:81939926-81940174 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 133, 37

Conread position: 71-366
Cow position: chr3:2397111-2396805 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 40

Conread position: 72-302
Cow position: chr3:17935254-17935033 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 37, 133

Conread position: 72-307
Cow position: chr3:74600792-74601018 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 7, 26

Conread position: 72-317
Cow position: chr3:7678349-7678585 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 186
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 132, 21

Conread position: 72-356
Cow position: chr3:73776946-73777241 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 200
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 102

Conread position: 76-365
Cow position: chr3:59271236-59271516 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 214
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 241, 38

Conread position: 80-317
Cow position: chr3:6873569-6873327 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 26, 0

Conread position: 81-327
Cow position: chr3:2024866-2025115 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 40

Conread position: 81-327
Cow position: chr3:57754798-57754548 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 198
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 122, 40

Conread position: 81-327
Cow position: chr3:67704218-67704472 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 192
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 33, 194

Conread position: 81-366
Cow position: chr3:65058384-65058674 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 30

Conread position: 81-372
Cow position: chr3:55970189-55970487 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 220
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 121, 40

Conread position: 81-373
Cow position: chr3:54903255-54903554 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 122, 40

Conread position: 82-362
Cow position: chr3:53112851-53113145 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 39

Conread position: 85-327
Cow position: chr3:46900881-46901127 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 113, 36

Conread position: 86-308
Cow position: chr3:17284526-17284753 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 78, 10

Conread position: 87-356
Cow position: chr3:53790856-53790571 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 79, 22

Conread position: 87-369
Cow position: chr3:46161157-46160866 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 27

Conread position: 89-317
Cow position: chr3:65800285-65800508 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 184
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 79, 27

Conread position: 94-305
Cow position: chr3:18763589-18763803 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 109, 27

Conread position: 94-327
Cow position: chr3:70401598-70401831 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 22

Conread position: 95-366
Cow position: chr3:53739496-53739211 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 206
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 7, 27

Conread position: 95-372
Cow position: chr3:30463471-30463191 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 22

Conread position: 96-318
Cow position: chr3:13330076-13329860 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 108, 12

Conread position: 96-366
Cow position: chr3:62826926-62826648 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 108, 25

Conread position: 98-304
Cow position: chr3:2216059-2216269 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 168
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 107, 23

Conread position: 100-297
Cow position: chr3:59392406-59392207 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 160
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 103, 21

Conread position: 101-309
Cow position: chr3:34316263-34316049 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 162
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 103, 5

Conread position: 102-368
Cow position: chr3:11019821-11020095 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 93, 19

Conread position: 103-362
Cow position: chr3:70333769-70333511 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 101, 18

Conread position: 103-366
Cow position: chr3:7331420-7331149 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 194
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 176

Conread position: 105-317
Cow position: chr3:79148570-79148352 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 168
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 98, 16

Conread position: 105-327
Cow position: chr3:55124574-55124354 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 100, 175

Conread position: 105-344
Cow position: chr3:71430507-71430257 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 186
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 99, 18

Conread position: 105-356
Cow position: chr3:19198387-19198629 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 17

Conread position: 107-317
Cow position: chr3:18854799-18855012 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 100

Conread position: 108-264
Cow position: chr3:42914160-42914320 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 71

Conread position: 108-316
Cow position: chr3:14602006-14601796 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 106, 40

Conread position: 108-317
Cow position: chr3:8393646-8393853 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 140
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 95, 130

Conread position: 108-317
Cow position: chr3:29812951-29813161 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 164
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 96, 40

Conread position: 108-317
Cow position: chr3:33253171-33252960 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 41, 26

Conread position: 108-317
Cow position: chr3:73467326-73467540 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 96, 80

Conread position: 108-319
Cow position: chr3:51609523-51609739 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 165
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 95, 208

Conread position: 108-327
Cow position: chr3:4031675-4031900 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 96, 164

Conread position: 108-366
Cow position: chr3:3985039-3985301 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 96, 13

Conread position: 108-366
Cow position: chr3:73759810-73759542 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 201
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 35, 13

Conread position: 108-371
Cow position: chr3:19006376-19006637 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 202
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 95, 13

Conread position: 109-304
Cow position: chr3:66964583-66964396 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 95, 12

Conread position: 109-308
Cow position: chr3:39970164-39969960 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 95, 0

Conread position: 109-327
Cow position: chr3:44861600-44861377 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 95, 179

Conread position: 109-366
Cow position: chr3:68708293-68708034 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 91, 39

Conread position: 111-317
Cow position: chr3:56704827-56704627 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 164
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 164, 89

Conread position: 111-366
Cow position: chr3:73443377-73443115 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 191
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 93, 0

Conread position: 112-264
Cow position: chr3:18448972-18449123 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 136, 0

Conread position: 112-366
Cow position: chr3:27274251-27274505 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 91, 50

Conread position: 113-348
Cow position: chr3:38691692-38691452 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 184
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 91, 10

Conread position: 116-310
Cow position: chr3:83369037-83369227 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 156
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 88, 103

Conread position: 116-317
Cow position: chr3:66292463-66292260 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 88, 33

Conread position: 116-348
Cow position: chr3:61467324-61467555 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 88, 18

Conread position: 117-306
Cow position: chr3:17895570-17895752 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 161, 84

Conread position: 117-308
Cow position: chr3:36100544-36100743 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 117-317
Cow position: chr3:23471752-23471550 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 162
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 87, 185

Conread position: 117-317
Cow position: chr3:52863467-52863267 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 164
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 87, 31

Conread position: 117-317
Cow position: chr3:67744912-67744710 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 67, 149

Conread position: 117-327
Cow position: chr3:56653-56447 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 165
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 86, 30

Conread position: 117-327
Cow position: chr3:11949637-11949426 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 150

Conread position: 117-347
Cow position: chr3:17957183-17957416 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 181
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 86, 50

Conread position: 117-348
Cow position: chr3:58540814-58540573 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 87, 31

Conread position: 117-358
Cow position: chr3:23944813-23945056 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 87, 168

Conread position: 117-366
Cow position: chr3:5096919-5097181 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 105

Conread position: 117-366
Cow position: chr3:63179584-63179831 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 184
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 153, 87

Conread position: 117-366
Cow position: chr3:74878888-74878615 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 29, 133

Conread position: 117-366
Cow position: chr3:78946123-78945857 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 62

Conread position: 117-366
Cow position: chr3:84000327-84000587 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 14, 0

Conread position: 117-372
Cow position: chr3:78894598-78894345 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 157, 87

Conread position: 118-317
Cow position: chr3:30701039-30701223 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 119-309
Cow position: chr3:59208532-59208723 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 85, 152

Conread position: 119-317
Cow position: chr3:39171766-39171566 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 85, 142

Conread position: 119-352
Cow position: chr3:49140329-49140083 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 91, 23

Conread position: 119-366
Cow position: chr3:68881391-68881142 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 84, 29

Conread position: 120-308
Cow position: chr3:22170908-22171095 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 37, 94

Conread position: 120-308
Cow position: chr3:32597209-32597019 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 141

Conread position: 120-317
Cow position: chr3:26493505-26493304 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 83, 28

Conread position: 120-317
Cow position: chr3:77365575-77365381 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 157
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 82

Conread position: 120-351
Cow position: chr3:55460782-55460542 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 120-366
Cow position: chr3:81277985-81277724 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 121-366
Cow position: chr3:5374055-5374306 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 83, 26

Conread position: 121-366
Cow position: chr3:70334983-70334721 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 56

Conread position: 122-263
Cow position: chr3:75164189-75164048 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 103, 79

Conread position: 123-304
Cow position: chr3:53046935-53046753 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 148
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 80, 113

Conread position: 123-312
Cow position: chr3:18607090-18607285 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 26, 152

Conread position: 123-316
Cow position: chr3:34392374-34392181 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 81, 25

Conread position: 123-317
Cow position: chr3:42588071-42588274 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 80, 0

Conread position: 123-317
Cow position: chr3:75158087-75158276 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 150, 82

Conread position: 123-327
Cow position: chr3:23477957-23478156 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 145

Conread position: 123-327
Cow position: chr3:49482982-49482777 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 81, 25

Conread position: 123-327
Cow position: chr3:49731915-49731711 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 165
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 81, 25

Conread position: 123-327
Cow position: chr3:63861179-63860962 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 168
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 80, 198

Conread position: 123-342
Cow position: chr3:42483622-42483843 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 80, 209

Conread position: 123-366
Cow position: chr3:26065723-26065973 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 81, 235

Conread position: 123-366
Cow position: chr3:75570719-75570478 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 138, 28

Conread position: 124-308
Cow position: chr3:76138212-76138388 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 151, 71

Conread position: 124-317
Cow position: chr3:16810068-16809868 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 124-356
Cow position: chr3:74409218-74409439 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 150, 28

Conread position: 124-366
Cow position: chr3:23408619-23408382 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 185, 24

Conread position: 125-299
Cow position: chr3:61262527-61262703 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 79, 136

Conread position: 125-309
Cow position: chr3:5899550-5899730 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 79, 26

Conread position: 125-327
Cow position: chr3:57624187-57624394 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 36, 98

Conread position: 125-369
Cow position: chr3:38863837-38864084 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 40, 105

Conread position: 125-380
Cow position: chr3:73764469-73764206 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 80, 33

Conread position: 127-291
Cow position: chr3:84368643-84368481 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 77, 21

Conread position: 127-309
Cow position: chr3:54945851-54946037 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 77, 29

Conread position: 127-368
Cow position: chr3:30055720-30055481 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 9, 23

Conread position: 128-308
Cow position: chr3:525081-525258 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 76, 91

Conread position: 129-369
Cow position: chr3:45279185-45279443 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 39

Conread position: 131-256
Cow position: chr3:9638863-9638738 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 81

Conread position: 131-317
Cow position: chr3:51578591-51578404 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 73, 143

Conread position: 131-372
Cow position: chr3:13302126-13301870 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 61, 103

Conread position: 132-318
Cow position: chr3:14633255-14633069 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 16

Conread position: 132-362
Cow position: chr3:17451203-17450969 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 72, 143

Conread position: 133-317
Cow position: chr3:52650797-52650614 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 70, 16

Conread position: 136-317
Cow position: chr3:55970960-55971143 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 67, 135

Conread position: 136-327
Cow position: chr3:73394851-73395051 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 150
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 69, 0

Conread position: 137-327
Cow position: chr3:73590262-73590069 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 67, 30

Conread position: 139-315
Cow position: chr3:28692691-28692517 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 65, 9

Conread position: 139-362
Cow position: chr3:75080504-75080733 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 65, 162

Conread position: 140-327
Cow position: chr3:51234357-51234166 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 152
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 64, 82

Conread position: 141-350
Cow position: chr3:54881497-54881710 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 8

Conread position: 142-309
Cow position: chr3:53509945-53509776 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 129

Conread position: 143-309
Cow position: chr3:8060874-8061036 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 132, 61

Conread position: 143-317
Cow position: chr3:4087424-4087247 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 61, 87

Conread position: 143-317
Cow position: chr3:71237899-71238073 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 61, 36

Conread position: 143-362
Cow position: chr3:8604272-8604048 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 201

Conread position: 143-366
Cow position: chr3:61143835-61144073 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 144-307
Cow position: chr3:56476425-56476587 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 61, 82

Conread position: 144-317
Cow position: chr3:22820312-22820485 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 144-374
Cow position: chr3:3556287-3556527 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 57, 18

Conread position: 145-324
Cow position: chr3:23269846-23270021 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 135, 58

Conread position: 145-372
Cow position: chr3:43233247-43233486 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 146-307
Cow position: chr3:12563224-12563385 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 57, 13

Conread position: 146-372
Cow position: chr3:63332555-63332792 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 166
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 57, 210

Conread position: 147-317
Cow position: chr3:5045064-5044886 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 147-317
Cow position: chr3:35074426-35074600 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 13, 50

Conread position: 148-317
Cow position: chr3:26970572-26970744 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 125

Conread position: 148-327
Cow position: chr3:48578588-48578761 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 44, 54

Conread position: 148-366
Cow position: chr3:41328202-41328417 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 128, 65

Conread position: 149-366
Cow position: chr3:25754784-25754998 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 167, 55

Conread position: 150-317
Cow position: chr3:11711702-11711878 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 29

Conread position: 150-317
Cow position: chr3:52652325-52652165 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 83

Conread position: 151-351
Cow position: chr3:15752878-15752676 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 168, 80

Conread position: 153-347
Cow position: chr3:44932260-44932465 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 154
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 153-374
Cow position: chr3:55947327-55947566 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 155-327
Cow position: chr3:23445136-23444967 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 64

Conread position: 155-362
Cow position: chr3:55836075-55835851 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 157-348
Cow position: chr3:77006261-77006447 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 80

Conread position: 162-327
Cow position: chr3:83201767-83201596 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 162-375
Cow position: chr3:39661689-39661473 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 41, 59

Conread position: 163-327
Cow position: chr3:4861451-4861613 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 41, 133

Conread position: 164-333
Cow position: chr3:29334751-29334575 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 166-365
Cow position: chr3:17447843-17447639 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 82

Conread position: 167-359
Cow position: chr3:15192329-15192531 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 168-366
Cow position: chr3:55106676-55106465 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 173-374
Cow position: chr3:53836913-53836710 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 32, 76

Conread position: 178-316
Cow position: chr3:2198659-2198799 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 184-344
Cow position: chr3:25944860-25945032 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 19, 0

Conread position: 185-365
Cow position: chr3:35005561-35005749 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 89

Conread position: 206-315
Cow position: chr3:55712235-55712346 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 206-317
Cow position: chr3:38828572-38828685 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 206-327
Cow position: chr3:70631824-70631942 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 69, 60

Conread position: 206-372
Cow position: chr3:27697173-27696998 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 206-372
Cow position: chr3:66884135-66883960 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 67, 0

Show alignments to all cow chromosomes.