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Cow genome map

           
Conread name:
           
Lym1-jns19bF07.f
        

               
Conread position:
               
1-304
               

               
Cow position:
               
chr4:56233310-56233607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 89
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr4:12903434-12903743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 103
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr4:27292343-27292031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 77
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr4:64072731-64072424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
10, 92
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr4:42672788-42673104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 115
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr4:10731837-10732156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 66
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr4:16602438-16602120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 150
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr4:17124674-17124361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
12, 125
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr4:54501832-54501516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 121
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr4:62772320-62771992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 118
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr4:4084831-4084504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr4:11201437-11201764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 102
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr4:31136371-31136697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 55
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr4:43370232-43369906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 120
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr4:41301383-41301022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr4:21257509-21257160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 101
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chr4:22236858-22236507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr4:45644695-45644329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 116
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr4:37620270-37619901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 121
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr4:10055830-10056201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 9
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr4:12003841-12004209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 120
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr4:19584322-19584707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 120
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr4:51898620-51898991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr4:30960141-30960396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
101, 9
               

               
Conread position:
               
2-265
               

               
Cow position:
               
chr4:47774011-47773755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
202, 8
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr4:14131125-14131401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
113, 8
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr4:56409800-56410104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 125
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr4:19497629-19497335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 100
               

               
Conread position:
               
2-306
               

               
Cow position:
               
chr4:19306874-19307182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
9, 120
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr4:23853825-23854120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 7
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr4:64039732-64040026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
57, 8
               

               
Conread position:
               
2-316
               

               
Cow position:
               
chr4:39009588-39009898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 114
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr4:2244368-2244053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
147, 9
               

               
Conread position:
               
2-317
               

               
Cow position:
               
chr4:7501506-7501801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
147, 9
               

               
Conread position:
               
2-327
               

               
Cow position:
               
chr4:16239519-16239203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
108, 16
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr4:33097338-33097011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
282, 8
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr4:21058771-21058410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 124
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr4:36025695-36025353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
9, 70
               

               
Conread position:
               
2-364
               

               
Cow position:
               
chr4:11872294-11871933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 115
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr4:65650503-65650139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
9, 107
               

               
Conread position:
               
3-317
               

               
Cow position:
               
chr4:27755686-27755367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 113
               

               
Conread position:
               
3-317
               

               
Cow position:
               
chr4:53999901-53999576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 114
               

               
Conread position:
               
3-327
               

               
Cow position:
               
chr4:34166347-34166031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
3-346
               

               
Cow position:
               
chr4:25906706-25906361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
118, 101
               

               
Conread position:
               
3-366
               

               
Cow position:
               
chr4:25983856-25984207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
7, 102
               

               
Conread position:
               
3-366
               

               
Cow position:
               
chr4:46274812-46275169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 119
               

               
Conread position:
               
3-368
               

               
Cow position:
               
chr4:57555585-57555962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 109
               

               
Conread position:
               
3-372
               

               
Cow position:
               
chr4:14513618-14513246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
7, 48
               

               
Conread position:
               
3-374
               

               
Cow position:
               
chr4:42480804-42481182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 97
               

               
Conread position:
               
3-374
               

               
Cow position:
               
chr4:68944557-68944183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 119
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr4:43884662-43884910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
7, 112
               

               
Conread position:
               
4-296
               

               
Cow position:
               
chr4:20562235-20562528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
21, 119
               

               
Conread position:
               
4-309
               

               
Cow position:
               
chr4:61999832-61999539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 76
               

               
Conread position:
               
10-306
               

               
Cow position:
               
chr4:242853-243150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
193, 106
               

               
Conread position:
               
10-311
               

               
Cow position:
               
chr4:51903228-51903531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 106
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr4:9136904-9137211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 111
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr4:13589722-13590021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
139, 8
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr4:25197870-25197561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 101
               

               
Conread position:
               
10-317
               

               
Cow position:
               
chr4:67392588-67392892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 61
               

               
Conread position:
               
10-318
               

               
Cow position:
               
chr4:53207935-53208228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
263, 74
               

               
Conread position:
               
10-325
               

               
Cow position:
               
chr4:14941941-14942261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
104, 45
               

               
Conread position:
               
10-327
               

               
Cow position:
               
chr4:3475245-3475573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
94, 255
               

               
Conread position:
               
10-327
               

               
Cow position:
               
chr4:51783798-51784124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
72, 227
               

               
Conread position:
               
10-351
               

               
Cow position:
               
chr4:67600095-67599766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
194, 56
               

               
Conread position:
               
10-362
               

               
Cow position:
               
chr4:24458472-24458116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 138
               

               
Conread position:
               
10-365
               

               
Cow position:
               
chr4:22841977-22842331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
194, 106
               

               
Conread position:
               
10-365
               

               
Cow position:
               
chr4:32260220-32259855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 111
               

               
Conread position:
               
10-366
               

               
Cow position:
               
chr4:11671081-11671443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 75
               

               
Conread position:
               
10-366
               

               
Cow position:
               
chr4:21392169-21391820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 13
               

               
Conread position:
               
10-366
               

               
Cow position:
               
chr4:53208866-53209228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 99
               

               
Conread position:
               
10-372
               

               
Cow position:
               
chr4:3388175-3388541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 135
               

               
Conread position:
               
10-372
               

               
Cow position:
               
chr4:61972848-61972466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 111
               

               
Conread position:
               
11-263
               

               
Cow position:
               
chr4:49409093-49409348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 110
               

               
Conread position:
               
11-301
               

               
Cow position:
               
chr4:20090939-20090652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
93, 111
               

               
Conread position:
               
11-317
               

               
Cow position:
               
chr4:7249941-7249636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 110
               

               
Conread position:
               
11-351
               

               
Cow position:
               
chr4:27276915-27276570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 219
               

               
Conread position:
               
11-362
               

               
Cow position:
               
chr4:30973969-30974324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 45
               

               
Conread position:
               
11-374
               

               
Cow position:
               
chr4:18974068-18974422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
192, 90
               

               
Conread position:
               
11-376
               

               
Cow position:
               
chr4:30574084-30574452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 110
               

               
Conread position:
               
12-244
               

               
Cow position:
               
chr4:36071011-36071239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
191, 101
               

               
Conread position:
               
12-273
               

               
Cow position:
               
chr4:46477309-46477047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
189, 96
               

               
Conread position:
               
15-308
               

               
Cow position:
               
chr4:49001669-49001371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
150, 106
               

               
Conread position:
               
15-366
               

               
Cow position:
               
chr4:480375-480017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 106
               

               
Conread position:
               
16-328
               

               
Cow position:
               
chr4:42232302-42232605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 20
               

               
Conread position:
               
18-308
               

               
Cow position:
               
chr4:14159489-14159202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
186, 98
               

               
Conread position:
               
18-315
               

               
Cow position:
               
chr4:1915940-1915647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 89
               

               
Conread position:
               
18-316
               

               
Cow position:
               
chr4:26549091-26549391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
86, 205
               

               
Conread position:
               
18-317
               

               
Cow position:
               
chr4:11100028-11099736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
186, 18
               

               
Conread position:
               
18-317
               

               
Cow position:
               
chr4:17474057-17474372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
65, 58
               

               
Conread position:
               
18-317
               

               
Cow position:
               
chr4:19237878-19238170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
188, 28
               

               
Conread position:
               
18-317
               

               
Cow position:
               
chr4:46526635-46526930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
132, 37
               

               
Conread position:
               
18-318
               

               
Cow position:
               
chr4:10026132-10026415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
18-318
               

               
Cow position:
               
chr4:10037048-10037348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
187, 26
               

               
Conread position:
               
18-364
               

               
Cow position:
               
chr4:46059106-46058774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
186, 129
               

               
Conread position:
               
18-374
               

               
Cow position:
               
chr4:21371011-21371390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
35, 152
               

               
Conread position:
               
19-308
               

               
Cow position:
               
chr4:23558122-23558416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
184, 102
               

               
Conread position:
               
19-308
               

               
Cow position:
               
chr4:29813897-29813613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 156
               

               
Conread position:
               
19-309
               

               
Cow position:
               
chr4:23554888-23555182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
185, 71
               

               
Conread position:
               
19-309
               

               
Cow position:
               
chr4:23561011-23561306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
184, 102
               

               
Conread position:
               
19-309
               

               
Cow position:
               
chr4:23573179-23573475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
184, 71
               

               
Conread position:
               
19-366
               

               
Cow position:
               
chr4:19434896-19435246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 98
               

               
Conread position:
               
25-265
               

               
Cow position:
               
chr4:30814719-30814957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
167, 96
               

               
Conread position:
               
25-304
               

               
Cow position:
               
chr4:69406013-69406291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
58, 40
               

               
Conread position:
               
25-308
               

               
Cow position:
               
chr4:15283005-15283291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
179, 74
               

               
Conread position:
               
25-309
               

               
Cow position:
               
chr4:16799546-16799263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
180, 60
               

               
Conread position:
               
25-317
               

               
Cow position:
               
chr4:24119269-24118974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 96
               

               
Conread position:
               
25-317
               

               
Cow position:
               
chr4:34383708-34383410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
88, 191
               

               
Conread position:
               
25-318
               

               
Cow position:
               
chr4:33433614-33433330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
25-326
               

               
Cow position:
               
chr4:58248053-58248343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 83
               

               
Conread position:
               
25-346
               

               
Cow position:
               
chr4:36892998-36893324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 76
               

               
Conread position:
               
25-362
               

               
Cow position:
               
chr4:19096937-19097275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 73
               

               
Conread position:
               
25-369
               

               
Cow position:
               
chr4:3990980-3990635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 91
               

               
Conread position:
               
25-373
               

               
Cow position:
               
chr4:7856-7501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 96
               

               
Conread position:
               
25-374
               

               
Cow position:
               
chr4:24372209-24371862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
90, 96
               

               
Conread position:
               
25-382
               

               
Cow position:
               
chr4:22051826-22051477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 92
               

               
Conread position:
               
26-317
               

               
Cow position:
               
chr4:12591567-12591278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 42
               

               
Conread position:
               
26-374
               

               
Cow position:
               
chr4:15635800-15635449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 95
               

               
Conread position:
               
26-374
               

               
Cow position:
               
chr4:15904744-15905099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 82
               

               
Conread position:
               
27-309
               

               
Cow position:
               
chr4:13694025-13693749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
177, 52
               

               
Conread position:
               
28-263
               

               
Cow position:
               
chr4:62673912-62674151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
84, 125
               

               
Conread position:
               
29-374
               

               
Cow position:
               
chr4:4672687-4672332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 86
               

               
Conread position:
               
30-325
               

               
Cow position:
               
chr4:48499479-48499781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 132
               

               
Conread position:
               
33-317
               

               
Cow position:
               
chr4:25972549-25972830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
166, 88
               

               
Conread position:
               
34-317
               

               
Cow position:
               
chr4:49159117-49158851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
34-364
               

               
Cow position:
               
chr4:48485644-48485983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 87
               

               
Conread position:
               
34-366
               

               
Cow position:
               
chr4:19744541-19744879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
35-291
               

               
Cow position:
               
chr4:1495749-1495492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
93, 85
               

               
Conread position:
               
35-294
               

               
Cow position:
               
chr4:26469297-26469556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
112, 14
               

               
Conread position:
               
35-302
               

               
Cow position:
               
chr4:58834747-58834484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
168, 36
               

               
Conread position:
               
35-308
               

               
Cow position:
               
chr4:17112226-17111953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 87
               

               
Conread position:
               
35-308
               

               
Cow position:
               
chr4:22743981-22744249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
171, 61
               

               
Conread position:
               
35-309
               

               
Cow position:
               
chr4:20328060-20327786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 67
               

               
Conread position:
               
35-310
               

               
Cow position:
               
chr4:65826213-65825928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
78, 28
               

               
Conread position:
               
35-314
               

               
Cow position:
               
chr4:3687577-3687853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 192
               

               
Conread position:
               
35-316
               

               
Cow position:
               
chr4:3850209-3850484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
169, 55
               

               
Conread position:
               
35-316
               

               
Cow position:
               
chr4:8947050-8947325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
89, 173
               

               
Conread position:
               
35-316
               

               
Cow position:
               
chr4:65891654-65891924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
162, 29
               

               
Conread position:
               
35-317
               

               
Cow position:
               
chr4:26163320-26163040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
35-317
               

               
Cow position:
               
chr4:27540273-27540548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 89
               

               
Conread position:
               
35-323
               

               
Cow position:
               
chr4:15623494-15623781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 75
               

               
Conread position:
               
35-327
               

               
Cow position:
               
chr4:20579-20864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
240, 44
               

               
Conread position:
               
35-327
               

               
Cow position:
               
chr4:21531977-21531700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
35-339
               

               
Cow position:
               
chr4:5610417-5610113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 68
               

               
Conread position:
               
35-347
               

               
Cow position:
               
chr4:33971244-33970936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
108, 44
               

               
Conread position:
               
35-351
               

               
Cow position:
               
chr4:26323394-26323703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
168, 66
               

               
Conread position:
               
35-355
               

               
Cow position:
               
chr4:14470916-14470604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 81
               

               
Conread position:
               
35-365
               

               
Cow position:
               
chr4:25879049-25879387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 57
               

               
Conread position:
               
35-366
               

               
Cow position:
               
chr4:10905804-10905473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 24
               

               
Conread position:
               
35-366
               

               
Cow position:
               
chr4:11901908-11901570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 67
               

               
Conread position:
               
35-366
               

               
Cow position:
               
chr4:23647190-23646858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 11
               

               
Conread position:
               
35-366
               

               
Cow position:
               
chr4:59871157-59871470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
238, 72
               

               
Conread position:
               
35-374
               

               
Cow position:
               
chr4:28836184-28836535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
174, 86
               

               
Conread position:
               
35-375
               

               
Cow position:
               
chr4:22216004-22215666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 81
               

               
Conread position:
               
36-317
               

               
Cow position:
               
chr4:13668960-13668691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
201, 60
               

               
Conread position:
               
36-317
               

               
Cow position:
               
chr4:31023099-31023382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
168, 40
               

               
Conread position:
               
36-317
               

               
Cow position:
               
chr4:54190761-54191021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
237, 35
               

               
Conread position:
               
36-317
               

               
Cow position:
               
chr4:61391548-61391271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
32, 63
               

               
Conread position:
               
36-326
               

               
Cow position:
               
chr4:45574-45865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
166, 68
               

               
Conread position:
               
36-351
               

               
Cow position:
               
chr4:44782027-44782347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 85
               

               
Conread position:
               
36-366
               

               
Cow position:
               
chr4:48137567-48137903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 75
               

               
Conread position:
               
36-366
               

               
Cow position:
               
chr4:49794335-49794657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
232, 19
               

               
Conread position:
               
37-264
               

               
Cow position:
               
chr4:49698248-49698483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
37-308
               

               
Cow position:
               
chr4:13832966-13832680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
71, 219
               

               
Conread position:
               
37-308
               

               
Cow position:
               
chr4:45918687-45918959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
141, 69
               

               
Conread position:
               
37-317
               

               
Cow position:
               
chr4:65168351-65168073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
166, 71
               

               
Conread position:
               
37-365
               

               
Cow position:
               
chr4:561056-561383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 61
               

               
Conread position:
               
37-366
               

               
Cow position:
               
chr4:42424146-42423814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 29
               

               
Conread position:
               
38-327
               

               
Cow position:
               
chr4:44665714-44665425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
59, 52
               

               
Conread position:
               
38-366
               

               
Cow position:
               
chr4:56240191-56239869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
79, 64
               

               
Conread position:
               
41-262
               

               
Cow position:
               
chr4:6166669-6166452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
68, 108
               

               
Conread position:
               
41-317
               

               
Cow position:
               
chr4:6653398-6653662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
164, 70
               

               
Conread position:
               
42-309
               

               
Cow position:
               
chr4:68387454-68387716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
162, 59
               

               
Conread position:
               
42-365
               

               
Cow position:
               
chr4:4185780-4186112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
174, 66
               

               
Conread position:
               
42-367
               

               
Cow position:
               
chr4:68076869-68076538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
161, 79
               

               
Conread position:
               
43-327
               

               
Cow position:
               
chr4:63365714-63365430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
160, 58
               

               
Conread position:
               
43-327
               

               
Cow position:
               
chr4:68764177-68764467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
161, 73
               

               
Conread position:
               
44-317
               

               
Cow position:
               
chr4:19561360-19561617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
44-366
               

               
Cow position:
               
chr4:10016921-10016612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
160, 59
               

               
Conread position:
               
45-309
               

               
Cow position:
               
chr4:45589925-45589674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
79, 108
               

               
Conread position:
               
45-366
               

               
Cow position:
               
chr4:65919284-65919602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 66
               

               
Conread position:
               
46-309
               

               
Cow position:
               
chr4:16736169-16736433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 55
               

               
Conread position:
               
46-366
               

               
Cow position:
               
chr4:14919673-14919985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
29, 71
               

               
Conread position:
               
48-317
               

               
Cow position:
               
chr4:21064336-21064072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
155, 51
               

               
Conread position:
               
49-314
               

               
Cow position:
               
chr4:10412047-10412305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 61
               

               
Conread position:
               
50-308
               

               
Cow position:
               
chr4:23570464-23570727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
153, 71
               

               
Conread position:
               
50-355
               

               
Cow position:
               
chr4:10916170-10915866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
154, 62
               

               
Conread position:
               
51-309
               

               
Cow position:
               
chr4:22010390-22010140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 70
               

               
Conread position:
               
52-309
               

               
Cow position:
               
chr4:37915661-37915413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 70
               

               
Conread position:
               
53-317
               

               
Cow position:
               
chr4:63459546-63459278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
54-317
               

               
Cow position:
               
chr4:34209697-34209964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
150, 64
               

               
Conread position:
               
55-362
               

               
Cow position:
               
chr4:22073639-22073333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 55
               

               
Conread position:
               
56-372
               

               
Cow position:
               
chr4:1060589-1060272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
218, 65
               

               
Conread position:
               
57-351
               

               
Cow position:
               
chr4:12048922-12049212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
138, 44
               

               
Conread position:
               
60-307
               

               
Cow position:
               
chr4:22528710-22528464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
144, 56
               

               
Conread position:
               
60-317
               

               
Cow position:
               
chr4:37935604-37935351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 56
               

               
Conread position:
               
62-327
               

               
Cow position:
               
chr4:285336-285591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
213, 54
               

               
Conread position:
               
63-366
               

               
Cow position:
               
chr4:19597634-19597333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 59
               

               
Conread position:
               
66-371
               

               
Cow position:
               
chr4:23599856-23600171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
138, 25
               

               
Conread position:
               
67-309
               

               
Cow position:
               
chr4:52584697-52584436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 12
               

               
Conread position:
               
71-304
               

               
Cow position:
               
chr4:56514247-56514016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
133, 40
               

               
Conread position:
               
76-366
               

               
Cow position:
               
chr4:45662807-45662520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 45
               

               
Conread position:
               
80-380
               

               
Cow position:
               
chr4:23451399-23451089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 41
               

               
Conread position:
               
81-317
               

               
Cow position:
               
chr4:33421663-33421426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
114, 40
               

               
Conread position:
               
83-317
               

               
Cow position:
               
chr4:59833640-59833878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
121, 38
               

               
Conread position:
               
85-317
               

               
Cow position:
               
chr4:18095971-18095737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
118, 16
               

               
Conread position:
               
88-308
               

               
Cow position:
               
chr4:53763418-53763198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
8, 189
               

               
Conread position:
               
90-317
               

               
Cow position:
               
chr4:27510978-27511196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
114, 24
               

               
Conread position:
               
92-309
               

               
Cow position:
               
chr4:19582907-19582692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
51, 29
               

               
Conread position:
               
93-309
               

               
Cow position:
               
chr4:620444-620225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
111, 35
               

               
Conread position:
               
93-317
               

               
Cow position:
               
chr4:36730900-36731127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
111, 28
               

               
Conread position:
               
93-327
               

               
Cow position:
               
chr4:50203455-50203698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
93-366
               

               
Cow position:
               
chr4:51727793-51728068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
94-374
               

               
Cow position:
               
chr4:54468585-54468304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
94-376
               

               
Cow position:
               
chr4:39128242-39128531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
95-317
               

               
Cow position:
               
chr4:37342829-37343048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
109, 29
               

               
Conread position:
               
95-327
               

               
Cow position:
               
chr4:56570515-56570753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
110, 53
               

               
Conread position:
               
96-263
               

               
Cow position:
               
chr4:29527466-29527294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
96-317
               

               
Cow position:
               
chr4:59785029-59785251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
47, 20
               

               
Conread position:
               
96-327
               

               
Cow position:
               
chr4:42267029-42266806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
179, 13
               

               
Conread position:
               
102-362
               

               
Cow position:
               
chr4:30690443-30690702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
102, 21
               

               
Conread position:
               
108-277
               

               
Cow position:
               
chr4:46385855-46385679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
108-296
               

               
Cow position:
               
chr4:24415008-24415197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 162
               

               
Conread position:
               
108-306
               

               
Cow position:
               
chr4:52632246-52632043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
149, 15
               

               
Conread position:
               
108-316
               

               
Cow position:
               
chr4:23509310-23509525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
108-317
               

               
Cow position:
               
chr4:5461130-5460933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
96, 40
               

               
Conread position:
               
108-317
               

               
Cow position:
               
chr4:11021928-11021721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
108-317
               

               
Cow position:
               
chr4:52748735-52748525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 163
               

               
Conread position:
               
108-327
               

               
Cow position:
               
chr4:33395965-33395755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
95, 39
               

               
Conread position:
               
108-351
               

               
Cow position:
               
chr4:5999471-5999218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
87, 66
               

               
Conread position:
               
108-366
               

               
Cow position:
               
chr4:25889110-25888840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
80, 186
               

               
Conread position:
               
109-263
               

               
Cow position:
               
chr4:28789396-28789241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
109-294
               

               
Cow position:
               
chr4:19438182-19438370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
95, 103
               

               
Conread position:
               
109-308
               

               
Cow position:
               
chr4:34337538-34337341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
96, 36
               

               
Conread position:
               
109-317
               

               
Cow position:
               
chr4:27529837-27530050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
109-317
               

               
Cow position:
               
chr4:43495626-43495835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
93, 39
               

               
Conread position:
               
111-309
               

               
Cow position:
               
chr4:8801229-8801426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
19, 112
               

               
Conread position:
               
111-366
               

               
Cow position:
               
chr4:67408267-67408518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
94, 35
               

               
Conread position:
               
112-300
               

               
Cow position:
               
chr4:3340676-3340867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
112-300
               

               
Cow position:
               
chr4:41867173-41867360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
92, 12
               

               
Conread position:
               
112-319
               

               
Cow position:
               
chr4:58261426-58261219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
92, 36
               

               
Conread position:
               
113-314
               

               
Cow position:
               
chr4:7571137-7571339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
90, 149
               

               
Conread position:
               
113-315
               

               
Cow position:
               
chr4:29237422-29237227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
91, 58
               

               
Conread position:
               
113-317
               

               
Cow position:
               
chr4:47348560-47348760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
91, 62
               

               
Conread position:
               
114-317
               

               
Cow position:
               
chr4:19316268-19316069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
90, 34
               

               
Conread position:
               
116-309
               

               
Cow position:
               
chr4:24187888-24187691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
11, 156
               

               
Conread position:
               
116-317
               

               
Cow position:
               
chr4:2141477-2141678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
88, 32
               

               
Conread position:
               
116-366
               

               
Cow position:
               
chr4:20299000-20299266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
33, 144
               

               
Conread position:
               
117-261
               

               
Cow position:
               
chr4:41898988-41899137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
117-289
               

               
Cow position:
               
chr4:3837008-3837188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
21, 151
               

               
Conread position:
               
117-308
               

               
Cow position:
               
chr4:36755481-36755671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
13, 116
               

               
Conread position:
               
117-308
               

               
Cow position:
               
chr4:44073038-44072842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
88, 158
               

               
Conread position:
               
117-317
               

               
Cow position:
               
chr4:46083164-46082958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
39, 157
               

               
Conread position:
               
117-327
               

               
Cow position:
               
chr4:46597115-46597324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
151, 32
               

               
Conread position:
               
117-366
               

               
Cow position:
               
chr4:51739971-51739718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
87, 102
               

               
Conread position:
               
117-366
               

               
Cow position:
               
chr4:63349744-63349494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
7, 67
               

               
Conread position:
               
118-327
               

               
Cow position:
               
chr4:34630635-34630839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
87, 30
               

               
Conread position:
               
118-353
               

               
Cow position:
               
chr4:4321273-4321023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
118-366
               

               
Cow position:
               
chr4:23847318-23847058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
118-372
               

               
Cow position:
               
chr4:43895070-43894816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
85, 18
               

               
Conread position:
               
119-308
               

               
Cow position:
               
chr4:22115340-22115532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
119-317
               

               
Cow position:
               
chr4:54667957-54667755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
119-327
               

               
Cow position:
               
chr4:25359339-25359556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
32, 58
               

               
Conread position:
               
119-366
               

               
Cow position:
               
chr4:19699833-19700089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
120-308
               

               
Cow position:
               
chr4:21365149-21365330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
84, 28
               

               
Conread position:
               
120-317
               

               
Cow position:
               
chr4:27561131-27561330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 141
               

               
Conread position:
               
120-317
               

               
Cow position:
               
chr4:27664740-27664945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
120-317
               

               
Cow position:
               
chr4:52167108-52166920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 27
               

               
Conread position:
               
120-351
               

               
Cow position:
               
chr4:33612628-33612386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
84, 155
               

               
Conread position:
               
121-327
               

               
Cow position:
               
chr4:44025078-44024874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
83, 13
               

               
Conread position:
               
122-327
               

               
Cow position:
               
chr4:43909489-43909689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
153, 80
               

               
Conread position:
               
122-356
               

               
Cow position:
               
chr4:62983816-62983572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
123-301
               

               
Cow position:
               
chr4:10471961-10472140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
81, 147
               

               
Conread position:
               
123-308
               

               
Cow position:
               
chr4:5797705-5797897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
123-317
               

               
Cow position:
               
chr4:1237378-1237183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
82, 44
               

               
Conread position:
               
123-317
               

               
Cow position:
               
chr4:31348456-31348256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
123-317
               

               
Cow position:
               
chr4:55395506-55395694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
152, 77
               

               
Conread position:
               
123-327
               

               
Cow position:
               
chr4:23445313-23445103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
81, 25
               

               
Conread position:
               
123-366
               

               
Cow position:
               
chr4:32725962-32726215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
81, 24
               

               
Conread position:
               
124-317
               

               
Cow position:
               
chr4:51866733-51866928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 120
               

               
Conread position:
               
124-350
               

               
Cow position:
               
chr4:1985388-1985610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
60, 80
               

               
Conread position:
               
125-249
               

               
Cow position:
               
chr4:18755925-18756050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
125-317
               

               
Cow position:
               
chr4:657079-656881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
24, 118
               

               
Conread position:
               
125-366
               

               
Cow position:
               
chr4:3283709-3283456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 117
               

               
Conread position:
               
126-309
               

               
Cow position:
               
chr4:2536574-2536756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
78, 31
               

               
Conread position:
               
126-366
               

               
Cow position:
               
chr4:13255836-13256077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
126-372
               

               
Cow position:
               
chr4:35940270-35940010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
78, 22
               

               
Conread position:
               
127-317
               

               
Cow position:
               
chr4:12260040-12259848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
22, 170
               

               
Conread position:
               
127-317
               

               
Cow position:
               
chr4:13871676-13871851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
127-327
               

               
Cow position:
               
chr4:31004662-31004461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
128-317
               

               
Cow position:
               
chr4:45367479-45367669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
76, 20
               

               
Conread position:
               
128-339
               

               
Cow position:
               
chr4:33357674-33357894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
76, 60
               

               
Conread position:
               
128-350
               

               
Cow position:
               
chr4:59008626-59008399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
76, 20
               

               
Conread position:
               
129-317
               

               
Cow position:
               
chr4:19322335-19322149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
75, 90
               

               
Conread position:
               
129-327
               

               
Cow position:
               
chr4:20157669-20157471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
130-317
               

               
Cow position:
               
chr4:12676558-12676738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
145, 18
               

               
Conread position:
               
130-346
               

               
Cow position:
               
chr4:49089539-49089756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
74, 103
               

               
Conread position:
               
130-374
               

               
Cow position:
               
chr4:24688604-24688346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
131-317
               

               
Cow position:
               
chr4:41292234-41292049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
72, 143
               

               
Conread position:
               
131-360
               

               
Cow position:
               
chr4:42922100-42921872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
73, 88
               

               
Conread position:
               
131-366
               

               
Cow position:
               
chr4:54455597-54455351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
73, 7
               

               
Conread position:
               
136-306
               

               
Cow position:
               
chr4:65842011-65841840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
67, 125
               

               
Conread position:
               
136-317
               

               
Cow position:
               
chr4:58881215-58881030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 12
               

               
Conread position:
               
138-317
               

               
Cow position:
               
chr4:21233118-21232941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
138-366
               

               
Cow position:
               
chr4:29291275-29291507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
180, 63
               

               
Conread position:
               
139-317
               

               
Cow position:
               
chr4:11897545-11897365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
65, 80
               

               
Conread position:
               
139-327
               

               
Cow position:
               
chr4:48321784-48321967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
66, 14
               

               
Conread position:
               
140-304
               

               
Cow position:
               
chr4:41602604-41602769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
63, 13
               

               
Conread position:
               
140-317
               

               
Cow position:
               
chr4:46370565-46370748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
140-356
               

               
Cow position:
               
chr4:26659060-26659281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
144-374
               

               
Cow position:
               
chr4:11004957-11004731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
60, 14
               

               
Conread position:
               
146-374
               

               
Cow position:
               
chr4:23911828-23911595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
147-362
               

               
Cow position:
               
chr4:25356544-25356331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 103
               

               
Conread position:
               
148-316
               

               
Cow position:
               
chr4:43295929-43295762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
150-352
               

               
Cow position:
               
chr4:19463255-19463469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
21, 126
               

               
Conread position:
               
151-317
               

               
Cow position:
               
chr4:2601995-2602165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
151-365
               

               
Cow position:
               
chr4:41908026-41907811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
49, 119
               

               
Conread position:
               
154-318
               

               
Cow position:
               
chr4:46501123-46501286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 78
               

               
Conread position:
               
156-327
               

               
Cow position:
               
chr4:22860935-22860767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
157-374
               

               
Cow position:
               
chr4:56590802-56591041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
162-317
               

               
Cow position:
               
chr4:27687700-27687857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
163-317
               

               
Cow position:
               
chr4:10999926-10999774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 128
               

               
Conread position:
               
164-372
               

               
Cow position:
               
chr4:43750033-43749818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 99
               

               
Conread position:
               
168-362
               

               
Cow position:
               
chr4:38935141-38935346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 64
               

               
Conread position:
               
169-317
               

               
Cow position:
               
chr4:36724826-36724971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
171-317
               

               
Cow position:
               
chr4:43740307-43740457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 41
               

               
Conread position:
               
175-368
               

               
Cow position:
               
chr4:29238254-29238051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 172
               

               
Conread position:
               
179-348
               

               
Cow position:
               
chr4:51768906-51769081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
25, 103
               

               
Conread position:
               
179-373
               

               
Cow position:
               
chr4:66118733-66118535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 163
               

               
Conread position:
               
182-317
               

               
Cow position:
               
chr4:13974175-13974036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 91
               

               
Conread position:
               
182-354
               

               
Cow position:
               
chr4:28839422-28839600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
22, 159
               

               
Conread position:
               
204-356
               

               
Cow position:
               
chr4:46552500-46552342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 66
               

               
Conread position:
               
207-311
               

               
Cow position:
               
chr4:38887314-38887209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
223-366
               

               
Cow position:
               
chr4:2099472-2099619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
39, 116
               
Show alignments to all cow chromosomes.