Cow genome map

Conread name: Lym1-jns19bF07.f

Conread position: 1-260
Cow position: chr6:11789066-11789324 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 10, 116

Conread position: 1-264
Cow position: chr6:52002034-52002295 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 10, 99

Conread position: 1-304
Cow position: chr6:9751380-9751078 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 211
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 119, 237

Conread position: 1-308
Cow position: chr6:57474044-57474349 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 210
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 10, 109

Conread position: 1-317
Cow position: chr6:4864872-4864568 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 9

Conread position: 1-317
Cow position: chr6:44098754-44099067 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 9

Conread position: 1-327
Cow position: chr6:24327471-24327148 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 121

Conread position: 1-327
Cow position: chr6:34075691-34076020 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 101

Conread position: 1-350
Cow position: chr6:52478778-52478399 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 267
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 10, 296

Conread position: 1-362
Cow position: chr6:12550932-12551304 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 264
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 10, 116

Conread position: 1-362
Cow position: chr6:15305253-15305605 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 84

Conread position: 1-366
Cow position: chr6:6068024-6067664 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 262
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 10, 103

Conread position: 1-366
Cow position: chr6:18961856-18961477 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 271
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 10, 68

Conread position: 1-372
Cow position: chr6:46205682-46206057 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 121

Conread position: 1-375
Cow position: chr6:21312091-21311711 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 101

Conread position: 2-296
Cow position: chr6:12934473-12934180 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 147, 84

Conread position: 2-299
Cow position: chr6:29077396-29077692 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 209
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 202, 9

Conread position: 2-300
Cow position: chr6:8209920-8209628 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 211
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 9, 100

Conread position: 2-310
Cow position: chr6:10106333-10106018 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 9

Conread position: 2-317
Cow position: chr6:8636942-8637255 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 10

Conread position: 2-317
Cow position: chr6:65870692-65871010 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 9

Conread position: 2-327
Cow position: chr6:17090259-17090592 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 227
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 91, 144

Conread position: 2-327
Cow position: chr6:42565353-42565682 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 9

Conread position: 3-262
Cow position: chr6:25783981-25784237 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 200, 8

Conread position: 3-308
Cow position: chr6:48807322-48807024 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 211
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 54

Conread position: 3-351
Cow position: chr6:13741363-13741714 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 89

Conread position: 3-375
Cow position: chr6:1886981-1886619 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 267
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 8, 107

Conread position: 4-369
Cow position: chr6:25407739-25407351 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 6-264
Cow position: chr6:6167074-6167324 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 6-317
Cow position: chr6:27852034-27851727 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 219
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 197, 110

Conread position: 10-262
Cow position: chr6:26837710-26837460 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 195, 61

Conread position: 10-308
Cow position: chr6:55474924-55475224 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 217
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 193, 111

Conread position: 10-315
Cow position: chr6:14839352-14839046 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 222
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 194, 111

Conread position: 10-316
Cow position: chr6:36470891-36470587 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 93

Conread position: 10-316
Cow position: chr6:41824154-41823842 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 111

Conread position: 10-317
Cow position: chr6:8318491-8318183 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 140, 87

Conread position: 10-317
Cow position: chr6:8562390-8562700 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 111

Conread position: 10-318
Cow position: chr6:50120112-50119805 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 92

Conread position: 10-327
Cow position: chr6:606936-607253 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 106

Conread position: 10-327
Cow position: chr6:10176624-10176303 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 86

Conread position: 10-327
Cow position: chr6:36928327-36928649 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 188, 95

Conread position: 10-327
Cow position: chr6:47305002-47305331 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 232
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 133, 111

Conread position: 10-327
Cow position: chr6:58073717-58074040 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 224
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 209, 0

Conread position: 10-356
Cow position: chr6:49398943-49398591 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 112

Conread position: 10-361
Cow position: chr6:16410870-16411224 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 111

Conread position: 10-365
Cow position: chr6:33302085-33302440 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 66

Conread position: 10-369
Cow position: chr6:18987893-18988253 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 13

Conread position: 10-372
Cow position: chr6:11169382-11169744 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 106

Conread position: 10-374
Cow position: chr6:3978987-3978616 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 88

Conread position: 10-375
Cow position: chr6:47540199-47540566 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 112

Conread position: 11-317
Cow position: chr6:1784090-1783797 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 75

Conread position: 11-317
Cow position: chr6:2607289-2607595 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 87

Conread position: 11-325
Cow position: chr6:5944626-5944309 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 191, 104

Conread position: 11-327
Cow position: chr6:53178314-53178629 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 111

Conread position: 11-350
Cow position: chr6:66363569-66363233 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 110

Conread position: 12-327
Cow position: chr6:58075904-58076222 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 89

Conread position: 12-366
Cow position: chr6:24781888-24781517 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 98

Conread position: 15-347
Cow position: chr6:10422844-10423182 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 220
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 54, 224

Conread position: 18-262
Cow position: chr6:52556789-52556549 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 176, 80

Conread position: 18-264
Cow position: chr6:60152718-60152963 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 187, 103

Conread position: 18-308
Cow position: chr6:32121593-32121882 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 103

Conread position: 18-317
Cow position: chr6:35181570-35181280 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 61

Conread position: 18-317
Cow position: chr6:37634472-37634764 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 98

Conread position: 18-317
Cow position: chr6:67214424-67214725 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 105

Conread position: 18-327
Cow position: chr6:5095872-5095554 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 203

Conread position: 18-346
Cow position: chr6:23695680-23696008 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 103

Conread position: 18-366
Cow position: chr6:35990546-35990198 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 133

Conread position: 18-366
Cow position: chr6:54140500-54140834 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 98

Conread position: 18-374
Cow position: chr6:10332424-10332055 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 242

Conread position: 18-374
Cow position: chr6:51835084-51835446 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 11

Conread position: 18-383
Cow position: chr6:35842343-35842700 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 103

Conread position: 19-317
Cow position: chr6:16699945-16700245 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 77

Conread position: 19-366
Cow position: chr6:5958332-5957990 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 52

Conread position: 19-374
Cow position: chr6:60859620-60859259 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 256
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 184, 82

Conread position: 25-264
Cow position: chr6:1914314-1914548 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 178, 46

Conread position: 25-308
Cow position: chr6:5302710-5302445 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 25-317
Cow position: chr6:12337674-12337969 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 91

Conread position: 25-317
Cow position: chr6:16737710-16738000 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 84

Conread position: 25-317
Cow position: chr6:20231136-20230848 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 89

Conread position: 25-317
Cow position: chr6:46557747-46558033 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 213
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 178, 96

Conread position: 25-327
Cow position: chr6:40031883-40032182 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 91

Conread position: 25-351
Cow position: chr6:51674599-51674929 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 239
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 93, 210

Conread position: 26-366
Cow position: chr6:5609768-5609407 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 251
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 90, 305

Conread position: 27-356
Cow position: chr6:6614126-6614465 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 241
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 176, 87

Conread position: 28-366
Cow position: chr6:60350613-60350254 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 256
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 18, 9

Conread position: 30-308
Cow position: chr6:24031069-24031351 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 91

Conread position: 31-277
Cow position: chr6:20056324-20056572 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 173
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 20, 82

Conread position: 35-265
Cow position: chr6:1174802-1174571 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 156, 81

Conread position: 35-273
Cow position: chr6:60467727-60467959 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 169, 86

Conread position: 35-277
Cow position: chr6:6471073-6470829 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 169, 31

Conread position: 35-308
Cow position: chr6:63047276-63047550 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 25

Conread position: 35-314
Cow position: chr6:32210930-32210651 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 114

Conread position: 35-314
Cow position: chr6:36652129-36652396 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 167, 36

Conread position: 35-317
Cow position: chr6:2012718-2012999 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 86

Conread position: 35-317
Cow position: chr6:9008908-9008631 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 75

Conread position: 35-317
Cow position: chr6:61575303-61575589 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 81

Conread position: 35-327
Cow position: chr6:31525751-31526036 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 169, 66

Conread position: 35-360
Cow position: chr6:29210201-29210529 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 81

Conread position: 35-362
Cow position: chr6:46465527-46465855 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 87

Conread position: 35-362
Cow position: chr6:49410980-49410663 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 227
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 86, 33

Conread position: 35-366
Cow position: chr6:38770998-38771323 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 249
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 75, 6

Conread position: 35-366
Cow position: chr6:62925292-62924960 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 6

Conread position: 35-372
Cow position: chr6:50446060-50445722 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 81

Conread position: 36-311
Cow position: chr6:46666806-46667086 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 86

Conread position: 36-317
Cow position: chr6:53401071-53401336 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 0

Conread position: 37-262
Cow position: chr6:611268-611487 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 167, 65

Conread position: 37-308
Cow position: chr6:33852082-33851826 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 166, 84

Conread position: 37-316
Cow position: chr6:19508730-19508461 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 214
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 76, 64

Conread position: 37-327
Cow position: chr6:64431643-64431928 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 64

Conread position: 38-317
Cow position: chr6:15938162-15937871 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 78, 146

Conread position: 39-347
Cow position: chr6:13688108-13687798 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 82

Conread position: 40-366
Cow position: chr6:55282585-55282256 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 40, 72

Conread position: 41-365
Cow position: chr6:63272912-63272574 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 243
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 78, 109

Conread position: 41-372
Cow position: chr6:1770490-1770154 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 80

Conread position: 42-309
Cow position: chr6:2546949-2547217 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 79

Conread position: 43-317
Cow position: chr6:28476885-28477158 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 191
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 59, 175

Conread position: 44-348
Cow position: chr6:54369188-54368884 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 57

Conread position: 44-362
Cow position: chr6:46570829-46571140 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 161, 41

Conread position: 44-366
Cow position: chr6:34196440-34196113 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 235
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 160, 67

Conread position: 47-317
Cow position: chr6:642866-642584 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 157, 62

Conread position: 50-317
Cow position: chr6:54867226-54867494 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 49

Conread position: 50-328
Cow position: chr6:57164141-57164421 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 60, 109

Conread position: 51-268
Cow position: chr6:37331682-37331892 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 24, 41

Conread position: 55-308
Cow position: chr6:21534778-21535027 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 59

Conread position: 60-382
Cow position: chr6:6264370-6264693 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 31, 44

Conread position: 61-351
Cow position: chr6:47150504-47150811 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 218
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 142, 55

Conread position: 63-317
Cow position: chr6:42961640-42961381 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 21

Conread position: 63-350
Cow position: chr6:50746704-50747004 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 119

Conread position: 63-374
Cow position: chr6:54365596-54365282 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 53

Conread position: 64-384
Cow position: chr6:48281723-48282049 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 57

Conread position: 67-362
Cow position: chr6:35471795-35471500 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 54

Conread position: 68-317
Cow position: chr6:61515465-61515211 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 46

Conread position: 70-264
Cow position: chr6:35769748-35769555 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 134, 51

Conread position: 71-366
Cow position: chr6:52248402-52248094 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 227
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 35, 49

Conread position: 79-317
Cow position: chr6:3952268-3952498 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 42

Conread position: 81-308
Cow position: chr6:64436597-64436350 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 81-317
Cow position: chr6:54293856-54294088 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 124, 33

Conread position: 81-317
Cow position: chr6:64449137-64449372 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 40

Conread position: 87-290
Cow position: chr6:3719257-3719051 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 163
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 57, 34

Conread position: 87-356
Cow position: chr6:31535821-31535541 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 202
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 117, 66

Conread position: 87-362
Cow position: chr6:53710867-53711149 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 61

Conread position: 90-302
Cow position: chr6:20329775-20329991 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 114, 27

Conread position: 90-309
Cow position: chr6:56849772-56849984 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 183, 31

Conread position: 91-293
Cow position: chr6:1002479-1002277 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 157
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 54, 30

Conread position: 91-366
Cow position: chr6:38853903-38853621 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 23

Conread position: 92-374
Cow position: chr6:7103482-7103195 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 19, 39

Conread position: 93-345
Cow position: chr6:54991235-54990990 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 112, 28

Conread position: 95-358
Cow position: chr6:61113509-61113781 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 108, 20

Conread position: 95-366
Cow position: chr6:9736880-9736619 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 94, 26

Conread position: 96-265
Cow position: chr6:45155867-45156037 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 119
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 96-316
Cow position: chr6:3929082-3929297 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 12, 21

Conread position: 97-308
Cow position: chr6:13040212-13040428 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 6, 25

Conread position: 97-372
Cow position: chr6:50983969-50984266 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 212
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 71, 19

Conread position: 98-314
Cow position: chr6:20098202-20097987 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 167
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 106, 23

Conread position: 99-374
Cow position: chr6:34251512-34251250 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 197
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 105, 22

Conread position: 100-327
Cow position: chr6:130400-130170 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 178
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 104, 21

Conread position: 104-317
Cow position: chr6:388935-389150 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 77

Conread position: 107-365
Cow position: chr6:4383262-4383517 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 97, 49

Conread position: 107-374
Cow position: chr6:16746109-16746389 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 203
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 99, 85

Conread position: 108-317
Cow position: chr6:7824533-7824743 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 95, 34

Conread position: 108-317
Cow position: chr6:67950729-67950932 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 97, 111

Conread position: 108-355
Cow position: chr6:24468620-24468368 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 44, 13

Conread position: 108-366
Cow position: chr6:16103432-16103158 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 195
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 142, 0

Conread position: 109-300
Cow position: chr6:51398572-51398764 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 156
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 95, 182

Conread position: 109-351
Cow position: chr6:37148970-37149208 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 189
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 95, 17

Conread position: 109-372
Cow position: chr6:19401633-19401888 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 94, 103

Conread position: 109-372
Cow position: chr6:49685356-49685629 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 95, 143

Conread position: 110-318
Cow position: chr6:21542092-21542301 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 159
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 94, 149

Conread position: 112-317
Cow position: chr6:20605708-20605916 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 91, 36

Conread position: 112-375
Cow position: chr6:18968997-18968733 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 26, 37

Conread position: 113-327
Cow position: chr6:29239718-29239933 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 37, 101

Conread position: 113-374
Cow position: chr6:46865824-46865546 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 196
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 114-317
Cow position: chr6:38207719-38207511 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 85, 34

Conread position: 114-317
Cow position: chr6:38614600-38614796 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 163
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 91, 106

Conread position: 116-317
Cow position: chr6:49002946-49002753 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 89, 32

Conread position: 116-372
Cow position: chr6:45160513-45160254 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 194
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 87, 33

Conread position: 117-264
Cow position: chr6:14289555-14289411 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 87, 102

Conread position: 117-317
Cow position: chr6:9026296-9026498 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 87, 144

Conread position: 117-317
Cow position: chr6:38440961-38441156 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 88, 134

Conread position: 117-326
Cow position: chr6:30826255-30826040 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 86, 30

Conread position: 117-326
Cow position: chr6:67304581-67304795 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 88, 31

Conread position: 117-340
Cow position: chr6:9452990-9452765 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 88, 35

Conread position: 117-347
Cow position: chr6:38895296-38895067 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 63

Conread position: 117-362
Cow position: chr6:53651820-53652075 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 32, 6

Conread position: 117-363
Cow position: chr6:10635956-10636204 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 183
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 181, 31

Conread position: 117-366
Cow position: chr6:15301038-15300791 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 96, 85

Conread position: 117-366
Cow position: chr6:44194766-44194511 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 190
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 88, 197

Conread position: 118-266
Cow position: chr6:10225896-10225754 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 86, 30

Conread position: 118-286
Cow position: chr6:21184736-21184907 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 86, 111

Conread position: 118-317
Cow position: chr6:1907319-1907521 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 144
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 28, 166

Conread position: 118-362
Cow position: chr6:899504-899259 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 86, 49

Conread position: 118-363
Cow position: chr6:37199769-37199492 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 118-366
Cow position: chr6:34031448-34031699 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 184
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 173, 86

Conread position: 119-352
Cow position: chr6:7190338-7190098 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 84, 131

Conread position: 119-365
Cow position: chr6:66874143-66874389 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 198, 81

Conread position: 119-366
Cow position: chr6:68049217-68049469 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 85, 29

Conread position: 120-308
Cow position: chr6:15923215-15923028 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 84, 29

Conread position: 121-348
Cow position: chr6:30786365-30786139 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 175
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 83, 97

Conread position: 122-317
Cow position: chr6:445095-445301 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 81, 0

Conread position: 122-327
Cow position: chr6:66453585-66453792 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 75, 98

Conread position: 122-366
Cow position: chr6:17997531-17997281 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 83, 0

Conread position: 123-327
Cow position: chr6:48344113-48344325 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 79, 0

Conread position: 123-366
Cow position: chr6:53460786-53460537 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 81, 29

Conread position: 123-368
Cow position: chr6:6460327-6460583 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 81, 25

Conread position: 123-376
Cow position: chr6:8965875-8966133 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 199
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 81, 30

Conread position: 124-308
Cow position: chr6:59015776-59015587 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 25, 117

Conread position: 125-317
Cow position: chr6:21110756-21110945 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 160
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 24, 88

Conread position: 126-326
Cow position: chr6:59069840-59069634 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 77, 148

Conread position: 126-356
Cow position: chr6:57405336-57405097 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 181
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 70, 36

Conread position: 126-366
Cow position: chr6:24515405-24515160 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 78, 144

Conread position: 127-317
Cow position: chr6:46400616-46400431 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 76, 85

Conread position: 127-327
Cow position: chr6:23532452-23532647 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 120

Conread position: 127-327
Cow position: chr6:53139140-53138928 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 77, 0

Conread position: 128-347
Cow position: chr6:58732524-58732294 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 75, 219

Conread position: 129-293
Cow position: chr6:31928064-31928221 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 44

Conread position: 130-317
Cow position: chr6:54864874-54864690 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 74, 18

Conread position: 130-366
Cow position: chr6:7989621-7989378 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 188
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 73, 32

Conread position: 130-366
Cow position: chr6:21231329-21231562 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 184
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 74, 5

Conread position: 131-307
Cow position: chr6:19695600-19695777 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 74, 17

Conread position: 131-317
Cow position: chr6:61137158-61137354 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 155
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 29, 17

Conread position: 132-327
Cow position: chr6:6098488-6098290 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 72, 101

Conread position: 132-327
Cow position: chr6:38641292-38641487 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 161
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 72, 87

Conread position: 133-374
Cow position: chr6:20157120-20157379 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 16

Conread position: 134-296
Cow position: chr6:89113-88945 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 131

Conread position: 134-302
Cow position: chr6:51463820-51463647 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 70, 151

Conread position: 135-317
Cow position: chr6:48425524-48425341 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 69, 81

Conread position: 135-327
Cow position: chr6:6400745-6400944 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 67, 116

Conread position: 135-355
Cow position: chr6:66131105-66131334 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 125, 83

Conread position: 136-316
Cow position: chr6:52025857-52025673 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 136-366
Cow position: chr6:28318207-28318437 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 67, 96

Conread position: 137-311
Cow position: chr6:46245524-46245343 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 141
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 139-311
Cow position: chr6:37603324-37603495 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 155

Conread position: 139-317
Cow position: chr6:8788236-8788057 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 65, 94

Conread position: 139-357
Cow position: chr6:33276840-33277057 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 172
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 64, 53

Conread position: 140-317
Cow position: chr6:415897-416079 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 13

Conread position: 140-368
Cow position: chr6:48187779-48187543 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 60, 83

Conread position: 140-375
Cow position: chr6:12092182-12091946 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 64, 71

Conread position: 142-308
Cow position: chr6:33918047-33917880 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 61, 123

Conread position: 142-309
Cow position: chr6:16191471-16191646 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 67, 15

Conread position: 142-314
Cow position: chr6:52412659-52412838 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 61, 7

Conread position: 142-317
Cow position: chr6:16423503-16423679 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 62, 91

Conread position: 142-366
Cow position: chr6:32269066-32268846 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 140, 32

Conread position: 143-366
Cow position: chr6:63720004-63720238 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 132, 60

Conread position: 144-327
Cow position: chr6:57680629-57680437 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 144-370
Cow position: chr6:29484897-29485125 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 60, 18

Conread position: 145-317
Cow position: chr6:53519816-53519643 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 58, 98

Conread position: 150-317
Cow position: chr6:47799110-47799272 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 125, 50

Conread position: 154-366
Cow position: chr6:1703630-1703842 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 120

Conread position: 156-362
Cow position: chr6:47574723-47574940 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 156-366
Cow position: chr6:5114228-5114011 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 8

Conread position: 162-306
Cow position: chr6:37783238-37783389 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 29, 65

Conread position: 162-317
Cow position: chr6:49604507-49604656 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 21

Conread position: 163-317
Cow position: chr6:9838987-9839150 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 164-327
Cow position: chr6:35993403-35993577 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 164-372
Cow position: chr6:60819341-60819557 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 39, 0

Conread position: 165-366
Cow position: chr6:65264708-65264504 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 49

Conread position: 166-356
Cow position: chr6:47355652-47355841 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 38, 95

Conread position: 166-374
Cow position: chr6:17334229-17334007 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 169-327
Cow position: chr6:11246595-11246756 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 110, 100

Conread position: 169-374
Cow position: chr6:53453599-53453808 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 148

Conread position: 170-366
Cow position: chr6:60739850-60740052 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 7

Conread position: 171-366
Cow position: chr6:47640604-47640394 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 173-360
Cow position: chr6:19264665-19264467 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 174-366
Cow position: chr6:44984162-44984368 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 179-317
Cow position: chr6:12543092-12542953 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 179-317
Cow position: chr6:32987157-32987018 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 25, 54

Conread position: 179-368
Cow position: chr6:48112045-48112238 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 25, 59

Conread position: 184-372
Cow position: chr6:57298866-57299059 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 19, 35

Conread position: 191-372
Cow position: chr6:9219126-9219316 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 192-360
Cow position: chr6:16316160-16316334 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 41

Conread position: 202-372
Cow position: chr6:19996485-19996660 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 11, 28

Conread position: 202-374
Cow position: chr6:48988302-48988476 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 62, 133

Conread position: 206-372
Cow position: chr6:17313603-17313779 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 223-366
Cow position: chr6:10225753-10225609 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 46

Conread position: 227-374
Cow position: chr6:16266609-16266770 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Show alignments to all cow chromosomes.