Cow genome map

Conread name: Lym1-jns19bF07.f

Conread position: 1-268
Cow position: chr9:24428213-24428483 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 10, 90

Conread position: 1-309
Cow position: chr9:7634668-7634370 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 222
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 137, 86

Conread position: 1-317
Cow position: chr9:42445570-42445891 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 111, 9

Conread position: 1-317
Cow position: chr9:55074730-55075045 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 135

Conread position: 1-318
Cow position: chr9:23430744-23431058 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 10, 68

Conread position: 1-327
Cow position: chr9:6192059-6192386 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 235
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 10, 78

Conread position: 1-327
Cow position: chr9:41680136-41679821 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 43

Conread position: 1-327
Cow position: chr9:53607989-53608319 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 18

Conread position: 1-350
Cow position: chr9:29006972-29006613 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 18

Conread position: 1-356
Cow position: chr9:1984101-1984483 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 269
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 10, 167

Conread position: 1-362
Cow position: chr9:11299296-11299655 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 68

Conread position: 1-366
Cow position: chr9:3411173-3410812 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 121

Conread position: 1-366
Cow position: chr9:8637061-8636698 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 250
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 10, 71

Conread position: 1-366
Cow position: chr9:37069146-37069526 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 337

Conread position: 1-366
Cow position: chr9:54528918-54528543 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 9

Conread position: 1-372
Cow position: chr9:21888574-21888193 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 121

Conread position: 1-372
Cow position: chr9:22433538-22433904 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 265
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 10, 116

Conread position: 1-372
Cow position: chr9:39681763-39681364 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 282
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 10, 115

Conread position: 2-279
Cow position: chr9:54666306-54666030 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 9

Conread position: 2-309
Cow position: chr9:10127271-10127576 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 210
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 186, 8

Conread position: 2-317
Cow position: chr9:10308607-10308920 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 9

Conread position: 2-327
Cow position: chr9:20681007-20681330 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 9

Conread position: 2-340
Cow position: chr9:5161669-5161997 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 236
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 9, 101

Conread position: 2-346
Cow position: chr9:20848339-20847986 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 83, 9

Conread position: 2-366
Cow position: chr9:34000210-34000589 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 9

Conread position: 3-296
Cow position: chr9:10355154-10355449 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 203
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 24, 150

Conread position: 3-308
Cow position: chr9:3932368-3932059 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 8, 106

Conread position: 3-317
Cow position: chr9:29184733-29185044 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 101

Conread position: 3-317
Cow position: chr9:30402014-30402332 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 122

Conread position: 3-317
Cow position: chr9:35375825-35375517 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 115

Conread position: 3-327
Cow position: chr9:1855681-1855342 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 79

Conread position: 3-361
Cow position: chr9:8997959-8997597 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 119

Conread position: 4-308
Cow position: chr9:8612699-8612379 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 216
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 120, 67

Conread position: 4-317
Cow position: chr9:20739104-20738790 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 109

Conread position: 5-317
Cow position: chr9:42998062-42998379 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 116

Conread position: 9-351
Cow position: chr9:47905884-47906227 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 147

Conread position: 10-262
Cow position: chr9:5455688-5455434 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 94

Conread position: 10-296
Cow position: chr9:62668799-62668510 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 63, 15

Conread position: 10-301
Cow position: chr9:16300173-16300464 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 133

Conread position: 10-309
Cow position: chr9:22617014-22616721 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 111

Conread position: 10-311
Cow position: chr9:35101268-35100962 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 53

Conread position: 10-315
Cow position: chr9:44466954-44467262 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 111

Conread position: 10-317
Cow position: chr9:9552480-9552181 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 106

Conread position: 10-317
Cow position: chr9:17410794-17411103 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 231
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 194, 106

Conread position: 10-317
Cow position: chr9:28726336-28726632 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 40

Conread position: 10-317
Cow position: chr9:52504909-52505222 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 101

Conread position: 10-317
Cow position: chr9:58674150-58673827 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 237
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 102, 29

Conread position: 10-317
Cow position: chr9:63746196-63745899 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 91

Conread position: 10-319
Cow position: chr9:62360834-62361148 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 222
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 193, 107

Conread position: 10-325
Cow position: chr9:9516376-9516685 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 111

Conread position: 10-327
Cow position: chr9:9491183-9490868 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 93

Conread position: 10-339
Cow position: chr9:24726284-24726615 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 50

Conread position: 10-351
Cow position: chr9:46316393-46316733 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 111

Conread position: 10-366
Cow position: chr9:28948248-28947889 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 244
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 193, 107

Conread position: 10-366
Cow position: chr9:32812740-32812380 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 34

Conread position: 10-372
Cow position: chr9:20407030-20406669 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 56

Conread position: 10-372
Cow position: chr9:34696901-34697277 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 111

Conread position: 11-263
Cow position: chr9:24904883-24904619 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 186
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 11, 0

Conread position: 11-308
Cow position: chr9:31662860-31662561 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 90

Conread position: 11-327
Cow position: chr9:25964430-25964755 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 110

Conread position: 12-372
Cow position: chr9:1520336-1520712 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 109

Conread position: 13-261
Cow position: chr9:49270953-49271208 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 20, 103

Conread position: 17-281
Cow position: chr9:8417989-8418257 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 69

Conread position: 18-304
Cow position: chr9:8534299-8534589 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 131, 103

Conread position: 18-306
Cow position: chr9:1997516-1997239 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 83

Conread position: 18-308
Cow position: chr9:39428428-39428699 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 18-314
Cow position: chr9:31077291-31077589 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 98

Conread position: 18-316
Cow position: chr9:38184091-38184395 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 93

Conread position: 18-316
Cow position: chr9:42585239-42585540 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 93

Conread position: 18-317
Cow position: chr9:3594142-3594442 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 220
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 133, 65

Conread position: 18-317
Cow position: chr9:9461272-9461567 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 54

Conread position: 18-317
Cow position: chr9:24997117-24997431 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 232
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 84, 169

Conread position: 18-327
Cow position: chr9:8998742-8998432 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 103

Conread position: 18-351
Cow position: chr9:26391151-26390818 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 98

Conread position: 19-362
Cow position: chr9:56453737-56453371 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 254
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 83, 47

Conread position: 20-317
Cow position: chr9:18002567-18002863 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 81

Conread position: 24-348
Cow position: chr9:27076882-27077193 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 238
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 56, 87

Conread position: 24-348
Cow position: chr9:30477401-30477727 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 223
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 154, 108

Conread position: 25-317
Cow position: chr9:38961057-38961346 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 96

Conread position: 25-317
Cow position: chr9:42498208-42497914 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 46

Conread position: 25-317
Cow position: chr9:52407547-52407255 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 58

Conread position: 25-367
Cow position: chr9:14796404-14796746 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 54

Conread position: 27-317
Cow position: chr9:1951892-1952180 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 177, 89

Conread position: 27-347
Cow position: chr9:17785081-17785401 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 70

Conread position: 33-327
Cow position: chr9:6089474-6089168 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 22

Conread position: 34-295
Cow position: chr9:53109892-53109642 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 29, 0

Conread position: 35-262
Cow position: chr9:41485649-41485853 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 171
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 169, 29

Conread position: 35-303
Cow position: chr9:33823461-33823201 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 169, 86

Conread position: 35-316
Cow position: chr9:63784558-63784836 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 209
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 169, 37

Conread position: 35-317
Cow position: chr9:22318708-22318439 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 169, 86

Conread position: 35-317
Cow position: chr9:36445991-36445717 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 86

Conread position: 35-317
Cow position: chr9:61997227-61997511 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 16

Conread position: 35-317
Cow position: chr9:62442651-62442379 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 86

Conread position: 35-317
Cow position: chr9:64050190-64050472 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 211
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 147, 86

Conread position: 35-317
Cow position: chr9:64092056-64091773 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 58

Conread position: 35-327
Cow position: chr9:7410152-7409853 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 86

Conread position: 35-327
Cow position: chr9:22114271-22114559 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 219
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 169, 20

Conread position: 35-327
Cow position: chr9:31347323-31347031 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 81

Conread position: 35-346
Cow position: chr9:5501217-5500911 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 37

Conread position: 35-349
Cow position: chr9:34957682-34957994 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 86

Conread position: 35-351
Cow position: chr9:3388061-3387739 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 109, 86

Conread position: 35-362
Cow position: chr9:31078714-31079047 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 246
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 74, 36

Conread position: 35-362
Cow position: chr9:44831687-44832020 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 238
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 169, 86

Conread position: 35-365
Cow position: chr9:5246215-5245895 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 66

Conread position: 35-366
Cow position: chr9:5510094-5509755 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 86

Conread position: 35-366
Cow position: chr9:50080676-50081009 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 81

Conread position: 35-369
Cow position: chr9:26404159-26403813 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 86

Conread position: 36-294
Cow position: chr9:18008504-18008752 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 65

Conread position: 36-309
Cow position: chr9:57950962-57951226 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 32

Conread position: 36-366
Cow position: chr9:50606584-50606917 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 236
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 282, 85

Conread position: 36-380
Cow position: chr9:12428138-12428492 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 130, 58

Conread position: 37-262
Cow position: chr9:30145426-30145653 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 167, 53

Conread position: 37-304
Cow position: chr9:28773485-28773223 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 84

Conread position: 37-308
Cow position: chr9:2858904-2858633 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 135, 42

Conread position: 37-317
Cow position: chr9:3379479-3379211 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 37-317
Cow position: chr9:3959418-3959149 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 187
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 168, 61

Conread position: 37-317
Cow position: chr9:10092028-10092304 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 215
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 225, 23

Conread position: 37-317
Cow position: chr9:56253269-56252986 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 201
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 155, 112

Conread position: 37-317
Cow position: chr9:61022977-61022699 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 155, 60

Conread position: 37-347
Cow position: chr9:4928993-4928681 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 66

Conread position: 37-362
Cow position: chr9:1950290-1949956 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 98, 150

Conread position: 37-372
Cow position: chr9:41789655-41789309 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 249
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 73, 142

Conread position: 41-265
Cow position: chr9:36506903-36507126 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 141, 24

Conread position: 41-308
Cow position: chr9:54997662-54997930 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 201
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 163, 14

Conread position: 41-311
Cow position: chr9:20393764-20394024 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 154, 80

Conread position: 41-317
Cow position: chr9:22440140-22440421 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 208
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 143

Conread position: 41-324
Cow position: chr9:789147-788887 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 199
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 277, 70

Conread position: 41-362
Cow position: chr9:35167537-35167211 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 73

Conread position: 41-366
Cow position: chr9:5763266-5763602 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 80

Conread position: 41-375
Cow position: chr9:45756716-45756385 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 245
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 163, 37

Conread position: 42-317
Cow position: chr9:5433994-5433726 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 79

Conread position: 42-360
Cow position: chr9:17740582-17740906 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 73

Conread position: 42-376
Cow position: chr9:33218590-33218914 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 18

Conread position: 43-317
Cow position: chr9:33682037-33681772 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 176, 52

Conread position: 43-327
Cow position: chr9:824317-824038 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 200
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 223, 78

Conread position: 44-366
Cow position: chr9:9199421-9199749 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 68

Conread position: 44-374
Cow position: chr9:21030678-21030331 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 72

Conread position: 45-308
Cow position: chr9:21459795-21460055 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 223

Conread position: 47-273
Cow position: chr9:32787746-32787976 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 178
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 61, 103

Conread position: 49-355
Cow position: chr9:23388323-23388632 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 94, 52

Conread position: 49-374
Cow position: chr9:49982741-49983066 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 67

Conread position: 50-317
Cow position: chr9:38344250-38343979 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 59

Conread position: 51-348
Cow position: chr9:20989101-20989401 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 52

Conread position: 54-317
Cow position: chr9:22151741-22151994 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 36

Conread position: 54-356
Cow position: chr9:34666759-34666461 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 229
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 221, 55

Conread position: 56-327
Cow position: chr9:5226816-5227095 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 65

Conread position: 57-308
Cow position: chr9:2034516-2034272 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 139, 44

Conread position: 57-362
Cow position: chr9:45141279-45141565 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 227
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 147, 48

Conread position: 58-309
Cow position: chr9:37528803-37528550 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 146, 50

Conread position: 62-366
Cow position: chr9:6952433-6952134 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 216
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 106, 55

Conread position: 63-317
Cow position: chr9:6933730-6933985 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 58

Conread position: 63-317
Cow position: chr9:29330308-29330554 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 55, 93

Conread position: 63-366
Cow position: chr9:3924960-3924665 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 155

Conread position: 68-372
Cow position: chr9:15805584-15805898 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 48

Conread position: 72-327
Cow position: chr9:5319962-5319709 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 195
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 133, 49

Conread position: 74-374
Cow position: chr9:7866395-7866097 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 218
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 129, 7

Conread position: 76-304
Cow position: chr9:10118337-10118563 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 67, 31

Conread position: 76-327
Cow position: chr9:21840403-21840153 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 128, 22

Conread position: 81-317
Cow position: chr9:29034704-29034942 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 152

Conread position: 81-318
Cow position: chr9:41416674-41416439 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 30

Conread position: 81-366
Cow position: chr9:22227761-22228049 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 35

Conread position: 81-366
Cow position: chr9:64155532-64155820 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 211
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 123, 28

Conread position: 85-317
Cow position: chr9:50976926-50977159 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 119, 36

Conread position: 87-350
Cow position: chr9:54924951-54924677 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 87-366
Cow position: chr9:57896809-57897079 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 213
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 116, 29

Conread position: 88-308
Cow position: chr9:48343920-48343699 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 12, 35

Conread position: 90-265
Cow position: chr9:55262264-55262438 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 60

Conread position: 90-317
Cow position: chr9:55256235-55256462 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 114, 26

Conread position: 93-312
Cow position: chr9:1350134-1350353 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 111, 28

Conread position: 93-347
Cow position: chr9:52724902-52725162 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 31, 57

Conread position: 93-369
Cow position: chr9:36490583-36490852 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 111, 28

Conread position: 95-372
Cow position: chr9:16538491-16538790 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 208
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 96-309
Cow position: chr9:17310250-17310466 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 12, 43

Conread position: 96-327
Cow position: chr9:35850211-35849979 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 18, 54

Conread position: 97-308
Cow position: chr9:15950846-15951055 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 11

Conread position: 99-311
Cow position: chr9:20318772-20318985 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 104, 22

Conread position: 99-327
Cow position: chr9:25958720-25958496 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 105, 9

Conread position: 99-361
Cow position: chr9:10011108-10010845 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 50, 35

Conread position: 103-315
Cow position: chr9:40542418-40542209 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 164
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 5, 26

Conread position: 105-307
Cow position: chr9:21712458-21712263 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 142
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 95, 19

Conread position: 105-366
Cow position: chr9:32371460-32371726 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 70, 11

Conread position: 105-372
Cow position: chr9:22696516-22696247 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 95, 16

Conread position: 107-372
Cow position: chr9:50076363-50076086 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 96, 14

Conread position: 108-309
Cow position: chr9:18072819-18073018 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 96, 51

Conread position: 108-356
Cow position: chr9:32306941-32307192 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 96, 40

Conread position: 109-305
Cow position: chr9:26310856-26310655 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 94, 164

Conread position: 109-308
Cow position: chr9:20091336-20091137 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 95, 58

Conread position: 109-366
Cow position: chr9:36999761-37000030 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 179

Conread position: 109-375
Cow position: chr9:30138423-30138156 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 95, 39

Conread position: 111-277
Cow position: chr9:2977677-2977509 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 93, 37

Conread position: 111-308
Cow position: chr9:10666729-10666928 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 92, 37

Conread position: 111-327
Cow position: chr9:55084001-55084222 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 111-366
Cow position: chr9:64559591-64559852 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 38, 21

Conread position: 114-362
Cow position: chr9:34689319-34689564 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 177
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 182, 87

Conread position: 114-364
Cow position: chr9:51205013-51204759 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 90, 9

Conread position: 114-365
Cow position: chr9:34374635-34374892 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 184
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 9, 36

Conread position: 114-366
Cow position: chr9:60037948-60037681 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 199
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 54, 34

Conread position: 115-369
Cow position: chr9:34468301-34468550 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 88, 59

Conread position: 116-262
Cow position: chr9:51557065-51557222 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 116-366
Cow position: chr9:64516806-64517068 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 200
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 88, 32

Conread position: 117-256
Cow position: chr9:49689227-49689086 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 117-317
Cow position: chr9:49764946-49764745 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 159
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 86, 151

Conread position: 117-321
Cow position: chr9:40060039-40060246 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 32, 9

Conread position: 117-351
Cow position: chr9:9405765-9405999 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 168
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 61, 88

Conread position: 117-360
Cow position: chr9:49404044-49403796 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 195

Conread position: 117-366
Cow position: chr9:9416117-9416365 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 101

Conread position: 119-317
Cow position: chr9:3070135-3070332 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 161
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 85, 100

Conread position: 119-317
Cow position: chr9:44710109-44709913 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 84, 29

Conread position: 119-327
Cow position: chr9:5400003-5399803 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 85, 31

Conread position: 119-327
Cow position: chr9:52001295-52001080 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 85, 45

Conread position: 120-296
Cow position: chr9:13670924-13670742 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 23, 155

Conread position: 122-261
Cow position: chr9:3762642-3762495 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 122-309
Cow position: chr9:12356141-12355952 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 81, 170

Conread position: 122-366
Cow position: chr9:9402900-9403143 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 172
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 194, 79

Conread position: 123-302
Cow position: chr9:9624744-9624927 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 72, 151

Conread position: 123-317
Cow position: chr9:36067189-36066997 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 80, 25

Conread position: 123-317
Cow position: chr9:61846866-61847062 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 82, 96

Conread position: 123-357
Cow position: chr9:59013051-59013287 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 151, 147

Conread position: 124-317
Cow position: chr9:59794997-59795199 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 79, 55

Conread position: 125-282
Cow position: chr9:58131442-58131604 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 79, 150

Conread position: 125-309
Cow position: chr9:10144190-10144380 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 79, 0

Conread position: 125-317
Cow position: chr9:10877584-10877783 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 153
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 79, 0

Conread position: 125-366
Cow position: chr9:41283310-41283046 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 65

Conread position: 126-306
Cow position: chr9:5756722-5756903 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 77, 142

Conread position: 126-316
Cow position: chr9:5532233-5532037 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 156
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 78, 22

Conread position: 126-317
Cow position: chr9:6225166-6225365 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 158
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 27, 0

Conread position: 126-318
Cow position: chr9:1712207-1712389 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 77, 22

Conread position: 127-301
Cow position: chr9:55287611-55287793 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 147
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 56, 148

Conread position: 127-366
Cow position: chr9:24887477-24887237 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 87, 26

Conread position: 128-317
Cow position: chr9:30749306-30749498 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 76, 0

Conread position: 130-372
Cow position: chr9:4128506-4128756 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 19, 141

Conread position: 131-308
Cow position: chr9:16745953-16745773 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 73, 48

Conread position: 131-315
Cow position: chr9:26828545-26828736 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 73, 134

Conread position: 131-316
Cow position: chr9:8288894-8288707 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 18, 138

Conread position: 132-327
Cow position: chr9:34901842-34902033 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 65, 16

Conread position: 134-317
Cow position: chr9:51620708-51620526 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 70, 14

Conread position: 135-317
Cow position: chr9:47869278-47869097 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 13

Conread position: 135-317
Cow position: chr9:55118350-55118168 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 73, 43

Conread position: 137-315
Cow position: chr9:16182221-16182399 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 69, 11

Conread position: 138-383
Cow position: chr9:41653058-41652802 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 193
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 66, 137

Conread position: 139-317
Cow position: chr9:41995982-41995798 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 147
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 65, 0

Conread position: 139-366
Cow position: chr9:36827392-36827166 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 172
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 181, 9

Conread position: 140-359
Cow position: chr9:8546585-8546362 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 64, 130

Conread position: 140-362
Cow position: chr9:34918999-34919225 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 64, 106

Conread position: 140-366
Cow position: chr9:9595686-9595919 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 6, 96

Conread position: 140-372
Cow position: chr9:11192901-11193146 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 63, 27

Conread position: 140-374
Cow position: chr9:43207112-43207351 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 177
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 63, 37

Conread position: 142-327
Cow position: chr9:23541153-23541332 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 175, 63

Conread position: 142-384
Cow position: chr9:63905339-63905595 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 143-357
Cow position: chr9:8563105-8562882 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 145-371
Cow position: chr9:38846087-38846311 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 122

Conread position: 147-374
Cow position: chr9:28735740-28735511 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 166
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 5, 132

Conread position: 149-317
Cow position: chr9:58979659-58979486 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 124

Conread position: 150-317
Cow position: chr9:3782620-3782448 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 154-317
Cow position: chr9:38614713-38614873 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 110, 40

Conread position: 156-327
Cow position: chr9:61544900-61544725 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 47, 96

Conread position: 157-327
Cow position: chr9:18216850-18217024 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 115

Conread position: 158-366
Cow position: chr9:33119633-33119857 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 46, 117

Conread position: 162-311
Cow position: chr9:52131263-52131112 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 103, 39

Conread position: 162-327
Cow position: chr9:50139526-50139362 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 57

Conread position: 162-374
Cow position: chr9:61493272-61493055 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 41, 165

Conread position: 163-308
Cow position: chr9:766906-767055 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 164-317
Cow position: chr9:6840254-6840090 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 164-366
Cow position: chr9:40604193-40603976 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 169-317
Cow position: chr9:11319394-11319545 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 103

Conread position: 173-364
Cow position: chr9:1973176-1972975 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 179-374
Cow position: chr9:6339030-6338816 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 181-366
Cow position: chr9:50667650-50667452 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 185-368
Cow position: chr9:43048404-43048590 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 151

Conread position: 201-317
Cow position: chr9:8920203-8920086 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 202-362
Cow position: chr9:1879580-1879415 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 73, 118

Conread position: 225-327
Cow position: chr9:11168911-11168805 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 89
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 50, 0

Show alignments to all cow chromosomes.