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Cow genome map

           
Conread name:
           
Lym1-jns21_C12.f
        

               
Conread position:
               
1-226
               

               
Cow position:
               
chr29:39038074-39038300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1-289
               

               
Cow position:
               
chr29:18449944-18450229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr29:34358784-34359105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
67, 15
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr29:43099554-43099904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
213, 60
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr29:21443146-21443511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
77, 29
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr29:26779071-26778721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
227, 68
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr29:26259671-26259283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
122, 68
               

               
Conread position:
               
2-284
               

               
Cow position:
               
chr29:21666280-21665996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 0
               

               
Conread position:
               
2-355
               

               
Cow position:
               
chr29:12680352-12679996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
2-360
               

               
Cow position:
               
chr29:11916015-11915653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 98
               

               
Conread position:
               
2-366
               

               
Cow position:
               
chr29:31489518-31489147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
2-380
               

               
Cow position:
               
chr29:7955794-7956175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 117
               

               
Conread position:
               
3-151
               

               
Cow position:
               
chr29:22776269-22776123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
3-174
               

               
Cow position:
               
chr29:17282254-17282089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chr29:936396-936220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
3-188
               

               
Cow position:
               
chr29:7443874-7444054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
3-188
               

               
Cow position:
               
chr29:25288726-25288916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 140
               

               
Conread position:
               
3-196
               

               
Cow position:
               
chr29:43088499-43088310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
66, 78
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr29:15798144-15797948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr29:22729758-22729558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
3-205
               

               
Cow position:
               
chr29:32655901-32656102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
141, 76
               

               
Conread position:
               
3-206
               

               
Cow position:
               
chr29:19363901-19363700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr29:9378828-9378624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
77, 94
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr29:16200283-16200491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr29:29308389-29308585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
198, 61
               

               
Conread position:
               
3-208
               

               
Cow position:
               
chr29:36357321-36357116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
65, 156
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr29:22032453-22032664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr29:26540347-26540566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-226
               

               
Cow position:
               
chr29:9310796-9310569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 161
               

               
Conread position:
               
3-226
               

               
Cow position:
               
chr29:44991232-44991454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr29:396595-396379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
220, 85
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr29:31651595-31651369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
149, 83
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr29:23155428-23155174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 190
               

               
Conread position:
               
3-250
               

               
Cow position:
               
chr29:30681510-30681769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
76, 170
               

               
Conread position:
               
3-352
               

               
Cow position:
               
chr29:42363826-42364173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 93
               

               
Conread position:
               
3-354
               

               
Cow position:
               
chr29:2623287-2623637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
86, 92
               

               
Conread position:
               
3-354
               

               
Cow position:
               
chr29:34773556-34773895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 42
               

               
Conread position:
               
3-355
               

               
Cow position:
               
chr29:5893039-5892688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
80, 26
               

               
Conread position:
               
3-355
               

               
Cow position:
               
chr29:19762456-19762114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 29
               

               
Conread position:
               
3-355
               

               
Cow position:
               
chr29:25092297-25091950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 94
               

               
Conread position:
               
3-355
               

               
Cow position:
               
chr29:26275794-26275455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
246, 66
               

               
Conread position:
               
3-355
               

               
Cow position:
               
chr29:36531059-36530705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 95
               

               
Conread position:
               
3-355
               

               
Cow position:
               
chr29:40117758-40117410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 67
               

               
Conread position:
               
3-355
               

               
Cow position:
               
chr29:40763503-40763843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
77, 94
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr29:1325639-1325279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
47, 174
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr29:19949498-19949146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
77, 94
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr29:24952880-24952521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
91, 136
               

               
Conread position:
               
3-360
               

               
Cow position:
               
chr29:28195340-28195680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
313, 66
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr29:10839132-10838782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
3-361
               

               
Cow position:
               
chr29:31929179-31928813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
82, 58
               

               
Conread position:
               
3-362
               

               
Cow position:
               
chr29:2744076-2744441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 99
               

               
Conread position:
               
3-366
               

               
Cow position:
               
chr29:44378214-44378591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
88, 375
               

               
Conread position:
               
3-369
               

               
Cow position:
               
chr29:4085489-4085144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
124, 56
               

               
Conread position:
               
3-381
               

               
Cow position:
               
chr29:4479974-4480368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 187
               

               
Conread position:
               
3-381
               

               
Cow position:
               
chr29:11434305-11433930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
307, 40
               

               
Conread position:
               
3-381
               

               
Cow position:
               
chr29:12783762-12784147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
61, 143
               

               
Conread position:
               
3-381
               

               
Cow position:
               
chr29:17110146-17109779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 24
               

               
Conread position:
               
3-381
               

               
Cow position:
               
chr29:22613614-22613235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 30
               

               
Conread position:
               
3-382
               

               
Cow position:
               
chr29:22162071-22162444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 26
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr29:16657883-16657521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
185, 75
               

               
Conread position:
               
5-273
               

               
Cow position:
               
chr29:7125012-7124735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 232
               

               
Conread position:
               
5-310
               

               
Cow position:
               
chr29:5063334-5063031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
5-312
               

               
Cow position:
               
chr29:13028641-13028319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
74, 194
               

               
Conread position:
               
5-355
               

               
Cow position:
               
chr29:732801-732459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
215, 40
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr29:10058352-10058704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
223, 24
               

               
Conread position:
               
5-380
               

               
Cow position:
               
chr29:19125521-19125152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
56, 208
               

               
Conread position:
               
6-162
               

               
Cow position:
               
chr29:33143166-33143321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
6-193
               

               
Cow position:
               
chr29:36697947-36697759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
76, 26
               

               
Conread position:
               
6-231
               

               
Cow position:
               
chr29:22734916-22735142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
68, 19
               

               
Conread position:
               
6-233
               

               
Cow position:
               
chr29:4070810-4070589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
217, 73
               

               
Conread position:
               
6-255
               

               
Cow position:
               
chr29:1011403-1011636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
66, 76
               

               
Conread position:
               
6-257
               

               
Cow position:
               
chr29:38979890-38980135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
74, 53
               

               
Conread position:
               
6-257
               

               
Cow position:
               
chr29:44139055-44139310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
217, 128
               

               
Conread position:
               
6-278
               

               
Cow position:
               
chr29:20770534-20770258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
49, 85
               

               
Conread position:
               
6-352
               

               
Cow position:
               
chr29:10818270-10818594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
229, 39
               

               
Conread position:
               
6-355
               

               
Cow position:
               
chr29:32963713-32963396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
6-356
               

               
Cow position:
               
chr29:22714520-22714887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
83, 199
               

               
Conread position:
               
6-360
               

               
Cow position:
               
chr29:28196830-28197171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
209, 23
               

               
Conread position:
               
6-361
               

               
Cow position:
               
chr29:32799513-32799880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
59, 159
               

               
Conread position:
               
7-199
               

               
Cow position:
               
chr29:15796673-15796482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 22
               

               
Conread position:
               
7-355
               

               
Cow position:
               
chr29:31944057-31943701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
94, 70
               

               
Conread position:
               
8-221
               

               
Cow position:
               
chr29:17804718-17804509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
8-360
               

               
Cow position:
               
chr29:20933903-20933542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
56, 105
               

               
Conread position:
               
8-378
               

               
Cow position:
               
chr29:4121044-4120656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 107
               

               
Conread position:
               
9-185
               

               
Cow position:
               
chr29:4441018-4441195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
66, 107
               

               
Conread position:
               
9-188
               

               
Cow position:
               
chr29:32215891-32215714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
173, 43
               

               
Conread position:
               
9-195
               

               
Cow position:
               
chr29:40350894-40351075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
9-209
               

               
Cow position:
               
chr29:36781123-36781318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
9-230
               

               
Cow position:
               
chr29:40791484-40791275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
9-256
               

               
Cow position:
               
chr29:29923389-29923639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
83, 52
               

               
Conread position:
               
9-263
               

               
Cow position:
               
chr29:4492619-4492370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
214, 70
               

               
Conread position:
               
9-276
               

               
Cow position:
               
chr29:36249225-36248952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
69, 104
               

               
Conread position:
               
9-280
               

               
Cow position:
               
chr29:23812861-23813123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
222, 24
               

               
Conread position:
               
9-284
               

               
Cow position:
               
chr29:15947356-15947080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
69, 107
               

               
Conread position:
               
9-303
               

               
Cow position:
               
chr29:1615114-1614815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
216, 79
               

               
Conread position:
               
9-304
               

               
Cow position:
               
chr29:5046840-5046541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 20
               

               
Conread position:
               
9-312
               

               
Cow position:
               
chr29:28734860-28735162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
105, 64
               

               
Conread position:
               
9-313
               

               
Cow position:
               
chr29:30227093-30227393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
56, 84
               

               
Conread position:
               
9-324
               

               
Cow position:
               
chr29:11667135-11666830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
9-324
               

               
Cow position:
               
chr29:28813785-28814109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
97, 310
               

               
Conread position:
               
9-337
               

               
Cow position:
               
chr29:24046185-24045846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
78, 105
               

               
Conread position:
               
9-340
               

               
Cow position:
               
chr29:35084036-35084370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
9-352
               

               
Cow position:
               
chr29:20910503-20910856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
65, 193
               

               
Conread position:
               
9-354
               

               
Cow position:
               
chr29:2056247-2055899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
30, 81
               

               
Conread position:
               
9-354
               

               
Cow position:
               
chr29:5408955-5409308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
65, 113
               

               
Conread position:
               
9-354
               

               
Cow position:
               
chr29:14838620-14838968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
114, 79
               

               
Conread position:
               
9-354
               

               
Cow position:
               
chr29:17222603-17222251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
66, 41
               

               
Conread position:
               
9-355
               

               
Cow position:
               
chr29:14501782-14501432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
69, 105
               

               
Conread position:
               
9-355
               

               
Cow position:
               
chr29:17297325-17296969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
66, 109
               

               
Conread position:
               
9-360
               

               
Cow position:
               
chr29:23845027-23844668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
69, 307
               

               
Conread position:
               
9-360
               

               
Cow position:
               
chr29:30441126-30440761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 110
               

               
Conread position:
               
9-361
               

               
Cow position:
               
chr29:4624810-4625164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 105
               

               
Conread position:
               
9-361
               

               
Cow position:
               
chr29:23698157-23697810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
120, 18
               

               
Conread position:
               
9-361
               

               
Cow position:
               
chr29:23874649-23874291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
65, 109
               

               
Conread position:
               
9-361
               

               
Cow position:
               
chr29:35292273-35291922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
152, 63
               

               
Conread position:
               
9-361
               

               
Cow position:
               
chr29:41531038-41530681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
56, 84
               

               
Conread position:
               
9-365
               

               
Cow position:
               
chr29:31674818-31674459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 70
               

               
Conread position:
               
9-373
               

               
Cow position:
               
chr29:39111137-39111493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 63
               

               
Conread position:
               
9-380
               

               
Cow position:
               
chr29:35458582-35458962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
71, 145
               

               
Conread position:
               
9-381
               

               
Cow position:
               
chr29:20673621-20673997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 87
               

               
Conread position:
               
9-381
               

               
Cow position:
               
chr29:25737232-25737608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 20
               

               
Conread position:
               
9-381
               

               
Cow position:
               
chr29:28739814-28739436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
78, 55
               

               
Conread position:
               
9-381
               

               
Cow position:
               
chr29:36210337-36209972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
30, 150
               

               
Conread position:
               
10-218
               

               
Cow position:
               
chr29:7290955-7290753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
10-226
               

               
Cow position:
               
chr29:32197880-32197666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
10-266
               

               
Cow position:
               
chr29:29324234-29324487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
59, 130
               

               
Conread position:
               
10-281
               

               
Cow position:
               
chr29:7624351-7624088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
216, 19
               

               
Conread position:
               
10-312
               

               
Cow position:
               
chr29:27846670-27846350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
65, 244
               

               
Conread position:
               
10-354
               

               
Cow position:
               
chr29:43328818-43328479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
226, 35
               

               
Conread position:
               
10-355
               

               
Cow position:
               
chr29:16609936-16609579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
68, 108
               

               
Conread position:
               
10-360
               

               
Cow position:
               
chr29:26017314-26017677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 105
               

               
Conread position:
               
10-361
               

               
Cow position:
               
chr29:34297385-34297733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
218, 100
               

               
Conread position:
               
10-361
               

               
Cow position:
               
chr29:34359640-34359970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
10-373
               

               
Cow position:
               
chr29:22028775-22029119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
180, 65
               

               
Conread position:
               
10-381
               

               
Cow position:
               
chr29:699442-699808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
74, 85
               

               
Conread position:
               
10-381
               

               
Cow position:
               
chr29:29769168-29769538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 86
               

               
Conread position:
               
10-381
               

               
Cow position:
               
chr29:35677355-35677737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
49, 75
               

               
Conread position:
               
11-340
               

               
Cow position:
               
chr29:21706212-21706537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
50, 93
               

               
Conread position:
               
11-354
               

               
Cow position:
               
chr29:9709878-9709535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 55
               

               
Conread position:
               
11-355
               

               
Cow position:
               
chr29:20626755-20626413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
29, 96
               

               
Conread position:
               
11-381
               

               
Cow position:
               
chr29:4520517-4520143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 79
               

               
Conread position:
               
11-381
               

               
Cow position:
               
chr29:22068556-22068939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
108, 68
               

               
Conread position:
               
12-381
               

               
Cow position:
               
chr29:19428835-19428471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
128, 19
               

               
Conread position:
               
12-381
               

               
Cow position:
               
chr29:35501481-35501841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
344, 41
               

               
Conread position:
               
13-381
               

               
Cow position:
               
chr29:43080424-43080802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
52, 124
               

               
Conread position:
               
15-226
               

               
Cow position:
               
chr29:23825031-23825241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
57, 74
               

               
Conread position:
               
15-302
               

               
Cow position:
               
chr29:1007999-1007707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
212, 75
               

               
Conread position:
               
15-361
               

               
Cow position:
               
chr29:19253648-19253991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
67, 36
               

               
Conread position:
               
16-261
               

               
Cow position:
               
chr29:41223344-41223119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
73, 109
               

               
Conread position:
               
16-355
               

               
Cow position:
               
chr29:38582150-38581813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 87
               

               
Conread position:
               
17-360
               

               
Cow position:
               
chr29:18735470-18735806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
104, 55
               

               
Conread position:
               
17-361
               

               
Cow position:
               
chr29:19389659-19389316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 210
               

               
Conread position:
               
18-300
               

               
Cow position:
               
chr29:17168583-17168298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
206, 61
               

               
Conread position:
               
19-366
               

               
Cow position:
               
chr29:29057353-29057008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
60, 151
               

               
Conread position:
               
19-381
               

               
Cow position:
               
chr29:10456403-10456745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
21-351
               

               
Cow position:
               
chr29:363426-363099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
51, 93
               

               
Conread position:
               
21-360
               

               
Cow position:
               
chr29:465223-465564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
57, 37
               

               
Conread position:
               
21-381
               

               
Cow position:
               
chr29:21932946-21933305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
23-361
               

               
Cow position:
               
chr29:1557100-1556764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 28
               

               
Conread position:
               
27-349
               

               
Cow position:
               
chr29:29795211-29795544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
27-355
               

               
Cow position:
               
chr29:3100096-3100420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
28, 200
               

               
Conread position:
               
34-355
               

               
Cow position:
               
chr29:9718613-9718931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
195, 60
               

               
Conread position:
               
36-355
               

               
Cow position:
               
chr29:29975199-29974882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
42, 89
               

               
Conread position:
               
43-381
               

               
Cow position:
               
chr29:28775310-28775647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 127
               

               
Conread position:
               
45-351
               

               
Cow position:
               
chr29:12025325-12025629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 71
               

               
Conread position:
               
46-360
               

               
Cow position:
               
chr29:7966395-7966082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
38, 69
               

               
Conread position:
               
50-381
               

               
Cow position:
               
chr29:11705255-11704930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
177, 46
               

               
Conread position:
               
57-366
               

               
Cow position:
               
chr29:27589060-27588748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
165, 32
               

               
Conread position:
               
57-373
               

               
Cow position:
               
chr29:25333326-25333632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
174, 22
               

               
Conread position:
               
64-302
               

               
Cow position:
               
chr29:40994761-40994999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
168, 25
               

               
Conread position:
               
64-348
               

               
Cow position:
               
chr29:29314520-29314810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
64-353
               

               
Cow position:
               
chr29:10156176-10156462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
165, 25
               

               
Conread position:
               
64-373
               

               
Cow position:
               
chr29:13639236-13639551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
46, 26
               

               
Conread position:
               
65-302
               

               
Cow position:
               
chr29:26559115-26559349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 55
               

               
Conread position:
               
65-354
               

               
Cow position:
               
chr29:8926334-8926615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
162, 14
               

               
Conread position:
               
65-355
               

               
Cow position:
               
chr29:19339130-19338821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
99, 24
               

               
Conread position:
               
65-355
               

               
Cow position:
               
chr29:38581107-38580817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
154, 28
               

               
Conread position:
               
65-355
               

               
Cow position:
               
chr29:45005498-45005785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
25, 120
               

               
Conread position:
               
65-360
               

               
Cow position:
               
chr29:23243751-23244047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 14
               

               
Conread position:
               
65-360
               

               
Cow position:
               
chr29:26653916-26654204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
118, 48
               

               
Conread position:
               
65-381
               

               
Cow position:
               
chr29:6844505-6844822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
102, 14
               

               
Conread position:
               
65-381
               

               
Cow position:
               
chr29:25088869-25088561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
174, 22
               

               
Conread position:
               
65-381
               

               
Cow position:
               
chr29:40583912-40583605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
160, 14
               

               
Conread position:
               
66-381
               

               
Cow position:
               
chr29:9912304-9911985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
150, 45
               

               
Conread position:
               
67-260
               

               
Cow position:
               
chr29:38978658-38978462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
159, 64
               

               
Conread position:
               
67-380
               

               
Cow position:
               
chr29:32290737-32290411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
68-360
               

               
Cow position:
               
chr29:39329479-39329761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
69-355
               

               
Cow position:
               
chr29:4874755-4875055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
114, 20
               

               
Conread position:
               
69-381
               

               
Cow position:
               
chr29:706834-707138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
153, 10
               

               
Conread position:
               
72-267
               

               
Cow position:
               
chr29:742530-742716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
184, 15
               

               
Conread position:
               
72-381
               

               
Cow position:
               
chr29:39567802-39567495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
156, 22
               

               
Conread position:
               
73-361
               

               
Cow position:
               
chr29:22175802-22175523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
73-367
               

               
Cow position:
               
chr29:28166103-28166387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
159, 6
               

               
Conread position:
               
73-381
               

               
Cow position:
               
chr29:36217233-36216925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 16
               

               
Conread position:
               
74-341
               

               
Cow position:
               
chr29:29176499-29176761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
152, 14
               

               
Conread position:
               
74-352
               

               
Cow position:
               
chr29:32210953-32211215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
75-373
               

               
Cow position:
               
chr29:4334838-4334543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
156, 89
               

               
Conread position:
               
77-354
               

               
Cow position:
               
chr29:13372778-13372504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
147, 11
               

               
Conread position:
               
79-355
               

               
Cow position:
               
chr29:5186378-5186657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
149, 10
               

               
Conread position:
               
79-360
               

               
Cow position:
               
chr29:86898-87185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
150, 21
               

               
Conread position:
               
79-361
               

               
Cow position:
               
chr29:463536-463822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
82-356
               

               
Cow position:
               
chr29:17607527-17607257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
131, 17
               

               
Conread position:
               
82-361
               

               
Cow position:
               
chr29:356433-356158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
132, 7
               

               
Conread position:
               
82-368
               

               
Cow position:
               
chr29:16195951-16195673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
155, 31
               

               
Conread position:
               
83-360
               

               
Cow position:
               
chr29:709021-709288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 29
               

               
Conread position:
               
83-361
               

               
Cow position:
               
chr29:18021571-18021848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 69
               

               
Conread position:
               
84-352
               

               
Cow position:
               
chr29:26615605-26615881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
84-355
               

               
Cow position:
               
chr29:20903179-20903446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
110, 127
               

               
Conread position:
               
84-381
               

               
Cow position:
               
chr29:41811479-41811770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
144, 75
               

               
Conread position:
               
90-330
               

               
Cow position:
               
chr29:4002997-4002759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
66, 165
               

               
Conread position:
               
93-355
               

               
Cow position:
               
chr29:28868745-28868474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 174
               

               
Conread position:
               
95-368
               

               
Cow position:
               
chr29:10235034-10235309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
129, 74
               

               
Conread position:
               
97-355
               

               
Cow position:
               
chr29:23983857-23984121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
98-273
               

               
Cow position:
               
chr29:18012655-18012474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
98-296
               

               
Cow position:
               
chr29:24578959-24578755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
128, 13
               

               
Conread position:
               
98-355
               

               
Cow position:
               
chr29:5098669-5098920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
9, 14
               

               
Conread position:
               
98-355
               

               
Cow position:
               
chr29:28446159-28446418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
98-380
               

               
Cow position:
               
chr29:2984987-2984693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
137, 52
               

               
Conread position:
               
102-268
               

               
Cow position:
               
chr29:23220408-23220577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
119, 25
               

               
Conread position:
               
102-355
               

               
Cow position:
               
chr29:27826613-27826364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
126, 57
               

               
Conread position:
               
104-332
               

               
Cow position:
               
chr29:27329983-27329753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
119, 7
               

               
Conread position:
               
110-360
               

               
Cow position:
               
chr29:29942642-29942900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
111-361
               

               
Cow position:
               
chr29:13615565-13615812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
203, 108
               

               
Conread position:
               
113-354
               

               
Cow position:
               
chr29:11562695-11562457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
106, 147
               

               
Conread position:
               
113-355
               

               
Cow position:
               
chr29:44682022-44682259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
116-355
               

               
Cow position:
               
chr29:24252314-24252076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
106, 47
               

               
Conread position:
               
116-359
               

               
Cow position:
               
chr29:19821362-19821121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
116-381
               

               
Cow position:
               
chr29:30188273-30188533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
192, 52
               

               
Conread position:
               
117-366
               

               
Cow position:
               
chr29:41365187-41364937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
122, 32
               

               
Conread position:
               
118-381
               

               
Cow position:
               
chr29:17409413-17409138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
120-356
               

               
Cow position:
               
chr29:10018654-10018411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
93, 120
               

               
Conread position:
               
120-381
               

               
Cow position:
               
chr29:16309818-16309558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
112, 217
               

               
Conread position:
               
122-231
               

               
Cow position:
               
chr29:40634069-40634177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
124-354
               

               
Cow position:
               
chr29:40166315-40166084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
98, 144
               

               
Conread position:
               
124-356
               

               
Cow position:
               
chr29:868846-868613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
113, 220
               

               
Conread position:
               
124-360
               

               
Cow position:
               
chr29:22778105-22778345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
100, 36
               

               
Conread position:
               
125-381
               

               
Cow position:
               
chr29:26986999-26986746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
86, 18
               

               
Conread position:
               
126-381
               

               
Cow position:
               
chr29:6926074-6925827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
93, 33
               

               
Conread position:
               
128-355
               

               
Cow position:
               
chr29:35485313-35485086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
185, 213
               

               
Conread position:
               
128-355
               

               
Cow position:
               
chr29:43009017-43009243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
102, 81
               

               
Conread position:
               
130-355
               

               
Cow position:
               
chr29:24103476-24103707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
99, 39
               

               
Conread position:
               
130-361
               

               
Cow position:
               
chr29:35442397-35442630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
135-381
               

               
Cow position:
               
chr29:18211938-18212175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
145-355
               

               
Cow position:
               
chr29:19792226-19792438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
166, 89
               

               
Conread position:
               
150-366
               

               
Cow position:
               
chr29:1124700-1124482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
151-380
               

               
Cow position:
               
chr29:42849269-42849036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
64, 53
               

               
Conread position:
               
155-379
               

               
Cow position:
               
chr29:14484497-14484736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
161-339
               

               
Cow position:
               
chr29:31594093-31594276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
170-381
               

               
Cow position:
               
chr29:9685982-9686193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
69, 16
               

               
Conread position:
               
170-381
               

               
Cow position:
               
chr29:39643201-39642984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
40, 90
               

               
Conread position:
               
188-381
               

               
Cow position:
               
chr29:4327499-4327299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
190-380
               

               
Cow position:
               
chr29:26735034-26734842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
36, 116
               

               
Conread position:
               
214-355
               

               
Cow position:
               
chr29:8125611-8125753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
218-355
               

               
Cow position:
               
chr29:21000620-21000481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
219-322
               

               
Cow position:
               
chr29:684000-684104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
220-381
               

               
Cow position:
               
chr29:3396080-3395918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
221-367
               

               
Cow position:
               
chr29:4066057-4065912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               
Show alignments to all cow chromosomes.