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Cow genome map

           
Conread name:
           
Lym1-jns24_F09.f
        

               
Conread position:
               
1-424
               

               
Cow position:
               
chr14:20932462-20932913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 24
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr14:16256614-16256979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
73, 261
               

               
Conread position:
               
2-398
               

               
Cow position:
               
chr14:8786699-8786280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 279
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chr14:13809794-13810230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 273
               

               
Conread position:
               
2-422
               

               
Cow position:
               
chr14:31784839-31785266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
56, 9
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chr14:21284493-21284924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 76
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chr14:47604437-47604008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
3-289
               

               
Cow position:
               
chr14:45718394-45718105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
142, 49
               

               
Conread position:
               
3-306
               

               
Cow position:
               
chr14:46654674-46654367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 51
               

               
Conread position:
               
3-418
               

               
Cow position:
               
chr14:40033866-40034259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 71
               

               
Conread position:
               
4-201
               

               
Cow position:
               
chr14:48430826-48431014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
181, 71
               

               
Conread position:
               
5-183
               

               
Cow position:
               
chr14:41531801-41531613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
5-246
               

               
Cow position:
               
chr14:16352201-16352464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 129
               

               
Conread position:
               
5-249
               

               
Cow position:
               
chr14:41267880-41267629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
66, 164
               

               
Conread position:
               
5-256
               

               
Cow position:
               
chr14:23050750-23050504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
70, 94
               

               
Conread position:
               
5-257
               

               
Cow position:
               
chr14:29723733-29723461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
5-280
               

               
Cow position:
               
chr14:37422930-37422636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
70, 272
               

               
Conread position:
               
5-282
               

               
Cow position:
               
chr14:41253136-41252835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
75, 152
               

               
Conread position:
               
5-286
               

               
Cow position:
               
chr14:12954533-12954226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
8, 261
               

               
Conread position:
               
5-289
               

               
Cow position:
               
chr14:23424108-23424418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
63, 279
               

               
Conread position:
               
5-289
               

               
Cow position:
               
chr14:23442869-23443179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
63, 279
               

               
Conread position:
               
5-303
               

               
Cow position:
               
chr14:12512048-12511726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 133
               

               
Conread position:
               
5-313
               

               
Cow position:
               
chr14:44084633-44084294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
75, 285
               

               
Conread position:
               
5-336
               

               
Cow position:
               
chr14:15997909-15997556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 264
               

               
Conread position:
               
5-363
               

               
Cow position:
               
chr14:26490876-26490510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 60
               

               
Conread position:
               
5-378
               

               
Cow position:
               
chr14:22459988-22459621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 24
               

               
Conread position:
               
5-381
               

               
Cow position:
               
chr14:10721859-10721483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
70, 97
               

               
Conread position:
               
5-407
               

               
Cow position:
               
chr14:21691414-21691002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
62, 103
               

               
Conread position:
               
5-410
               

               
Cow position:
               
chr14:12961440-12961849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
11, 180
               

               
Conread position:
               
5-410
               

               
Cow position:
               
chr14:34355837-34355421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 32
               

               
Conread position:
               
5-410
               

               
Cow position:
               
chr14:36289948-36289535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
61, 263
               

               
Conread position:
               
5-416
               

               
Cow position:
               
chr14:39434412-39433973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 237
               

               
Conread position:
               
5-418
               

               
Cow position:
               
chr14:43046019-43046433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 31
               

               
Conread position:
               
5-419
               

               
Cow position:
               
chr14:37679141-37678708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 81
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr14:38168547-38168974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 216
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr14:25231773-25231356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 73
               

               
Conread position:
               
5-422
               

               
Cow position:
               
chr14:46965443-46965851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 73
               

               
Conread position:
               
5-423
               

               
Cow position:
               
chr14:14622325-14621892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 331
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr14:5835772-5836199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr14:8488058-8488479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 80
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr14:8541364-8540921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 357
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr14:10906592-10907012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 114
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr14:26108494-26108935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 54
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr14:33774181-33773758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 45
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr14:38355051-38355478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 54
               

               
Conread position:
               
5-425
               

               
Cow position:
               
chr14:9019884-9020322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 273
               

               
Conread position:
               
5-425
               

               
Cow position:
               
chr14:23107181-23107622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
41, 23
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr14:10858283-10858728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 257
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr14:25386024-25385595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 271
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr14:35700290-35700728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 117
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr14:43031658-43032101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
65, 117
               

               
Conread position:
               
6-146
               

               
Cow position:
               
chr14:46114295-46114146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
6-174
               

               
Cow position:
               
chr14:26805189-26805012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
6-277
               

               
Cow position:
               
chr14:2038942-2038666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 214
               

               
Conread position:
               
6-412
               

               
Cow position:
               
chr14:36555286-36554868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 113
               

               
Conread position:
               
8-379
               

               
Cow position:
               
chr14:39037085-39037479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
95, 279
               

               
Conread position:
               
8-423
               

               
Cow position:
               
chr14:11615357-11614924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 268
               

               
Conread position:
               
8-423
               

               
Cow position:
               
chr14:18309454-18309016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 287
               

               
Conread position:
               
8-424
               

               
Cow position:
               
chr14:5630013-5630458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 278
               

               
Conread position:
               
8-424
               

               
Cow position:
               
chr14:19863557-19863146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 29
               

               
Conread position:
               
11-232
               

               
Cow position:
               
chr14:25398947-25399178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
142, 62
               

               
Conread position:
               
11-419
               

               
Cow position:
               
chr14:8848127-8848538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
86, 132
               

               
Conread position:
               
11-424
               

               
Cow position:
               
chr14:7648152-7647743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 176
               

               
Conread position:
               
12-424
               

               
Cow position:
               
chr14:6789254-6789664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 70
               

               
Conread position:
               
15-339
               

               
Cow position:
               
chr14:29592863-29592508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
61, 269
               

               
Conread position:
               
15-374
               

               
Cow position:
               
chr14:14182204-14182587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
40, 284
               

               
Conread position:
               
16-288
               

               
Cow position:
               
chr14:18763553-18763285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
32, 5
               

               
Conread position:
               
16-342
               

               
Cow position:
               
chr14:2975232-2974878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
52, 257
               

               
Conread position:
               
16-424
               

               
Cow position:
               
chr14:13006378-13006798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
74, 113
               

               
Conread position:
               
16-424
               

               
Cow position:
               
chr14:21017988-21018406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
44, 25
               

               
Conread position:
               
16-424
               

               
Cow position:
               
chr14:33247566-33247143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 241
               

               
Conread position:
               
16-424
               

               
Cow position:
               
chr14:47973857-47974274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
56, 79
               

               
Conread position:
               
17-299
               

               
Cow position:
               
chr14:46997907-46998217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
60, 268
               

               
Conread position:
               
17-300
               

               
Cow position:
               
chr14:25639897-25639606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 170
               

               
Conread position:
               
17-357
               

               
Cow position:
               
chr14:28803864-28803513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
72, 88
               

               
Conread position:
               
17-424
               

               
Cow position:
               
chr14:44878883-44878491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 38
               

               
Conread position:
               
17-424
               

               
Cow position:
               
chr14:48412991-48412582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 42
               

               
Conread position:
               
18-245
               

               
Cow position:
               
chr14:25381296-25381539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
45, 146
               

               
Conread position:
               
18-424
               

               
Cow position:
               
chr14:7959654-7960055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 153
               

               
Conread position:
               
18-424
               

               
Cow position:
               
chr14:47138913-47138503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
54, 103
               

               
Conread position:
               
19-423
               

               
Cow position:
               
chr14:8101654-8102072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 255
               

               
Conread position:
               
19-424
               

               
Cow position:
               
chr14:15990100-15990490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
19-424
               

               
Cow position:
               
chr14:47027496-47027082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 113
               

               
Conread position:
               
20-284
               

               
Cow position:
               
chr14:12127539-12127248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
22-269
               

               
Cow position:
               
chr14:12635000-12634748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
24-426
               

               
Cow position:
               
chr14:18904726-18904311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 71
               

               
Conread position:
               
42-319
               

               
Cow position:
               
chr14:1859723-1859423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
26, 85
               

               
Conread position:
               
42-321
               

               
Cow position:
               
chr14:23478730-23478998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
124, 185
               

               
Conread position:
               
42-424
               

               
Cow position:
               
chr14:30661895-30662282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 221
               

               
Conread position:
               
44-288
               

               
Cow position:
               
chr14:40754341-40754085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
40, 14
               

               
Conread position:
               
44-310
               

               
Cow position:
               
chr14:24607864-24608148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
14, 234
               

               
Conread position:
               
45-367
               

               
Cow position:
               
chr14:20435298-20435636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
111, 72
               

               
Conread position:
               
50-424
               

               
Cow position:
               
chr14:33791104-33791484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 7
               

               
Conread position:
               
52-384
               

               
Cow position:
               
chr14:27592043-27591700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
101, 74
               

               
Conread position:
               
61-422
               

               
Cow position:
               
chr14:9875331-9875681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
64-370
               

               
Cow position:
               
chr14:20110797-20110479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
89, 176
               

               
Conread position:
               
64-404
               

               
Cow position:
               
chr14:40165350-40165696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 33
               

               
Conread position:
               
64-419
               

               
Cow position:
               
chr14:32371815-32371456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
91, 79
               

               
Conread position:
               
64-424
               

               
Cow position:
               
chr14:14316812-14317161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 191
               

               
Conread position:
               
65-202
               

               
Cow position:
               
chr14:33643886-33644028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
65-408
               

               
Cow position:
               
chr14:16237586-16237226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 207
               

               
Conread position:
               
65-424
               

               
Cow position:
               
chr14:45677157-45677518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
88, 13
               

               
Conread position:
               
70-310
               

               
Cow position:
               
chr14:10631187-10630943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
71, 8
               

               
Conread position:
               
70-374
               

               
Cow position:
               
chr14:8750008-8750319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
83, 58
               

               
Conread position:
               
70-422
               

               
Cow position:
               
chr14:41127828-41128183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 94
               

               
Conread position:
               
70-424
               

               
Cow position:
               
chr14:39778683-39779048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 200
               

               
Conread position:
               
70-424
               

               
Cow position:
               
chr14:42330283-42330649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 188
               

               
Conread position:
               
71-396
               

               
Cow position:
               
chr14:19372271-19372610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 120
               

               
Conread position:
               
71-419
               

               
Cow position:
               
chr14:43035834-43036168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
131, 26
               

               
Conread position:
               
71-424
               

               
Cow position:
               
chr14:32452181-32452556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 32
               

               
Conread position:
               
71-424
               

               
Cow position:
               
chr14:35018821-35018461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 172
               

               
Conread position:
               
71-424
               

               
Cow position:
               
chr14:37131594-37131953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 21
               

               
Conread position:
               
71-424
               

               
Cow position:
               
chr14:48427006-48427371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 157
               

               
Conread position:
               
73-291
               

               
Cow position:
               
chr14:16344212-16344006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
73-310
               

               
Cow position:
               
chr14:16550070-16549822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 196
               

               
Conread position:
               
73-315
               

               
Cow position:
               
chr14:33457109-33456854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
71, 198
               

               
Conread position:
               
73-324
               

               
Cow position:
               
chr14:42246939-42247187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
67, 134
               

               
Conread position:
               
73-335
               

               
Cow position:
               
chr14:19394297-19394570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
67, 52
               

               
Conread position:
               
73-367
               

               
Cow position:
               
chr14:12520368-12520071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
67, 152
               

               
Conread position:
               
73-367
               

               
Cow position:
               
chr14:37447529-37447240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 156
               

               
Conread position:
               
73-379
               

               
Cow position:
               
chr14:16032946-16033257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
101, 72
               

               
Conread position:
               
73-424
               

               
Cow position:
               
chr14:15055057-15054693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
78, 198
               

               
Conread position:
               
73-424
               

               
Cow position:
               
chr14:18345794-18345436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 190
               

               
Conread position:
               
73-424
               

               
Cow position:
               
chr14:28378293-28378659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
79, 197
               

               
Conread position:
               
73-424
               

               
Cow position:
               
chr14:38920886-38921232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 157
               

               
Conread position:
               
73-424
               

               
Cow position:
               
chr14:40230701-40230342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 104
               

               
Conread position:
               
73-424
               

               
Cow position:
               
chr14:49021964-49021609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 59
               

               
Conread position:
               
73-425
               

               
Cow position:
               
chr14:18657673-18657304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 198
               

               
Conread position:
               
74-249
               

               
Cow position:
               
chr14:1796128-1796312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 21
               

               
Conread position:
               
74-293
               

               
Cow position:
               
chr14:19951501-19951733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
49, 198
               

               
Conread position:
               
74-310
               

               
Cow position:
               
chr14:21933408-21933159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
74, 176
               

               
Conread position:
               
74-324
               

               
Cow position:
               
chr14:38747613-38747862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 107
               

               
Conread position:
               
74-385
               

               
Cow position:
               
chr14:34983802-34984120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 144
               

               
Conread position:
               
74-388
               

               
Cow position:
               
chr14:28115251-28114924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 22
               

               
Conread position:
               
74-397
               

               
Cow position:
               
chr14:49824684-49824360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
71, 157
               

               
Conread position:
               
74-424
               

               
Cow position:
               
chr14:10078203-10078552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
79, 196
               

               
Conread position:
               
74-424
               

               
Cow position:
               
chr14:16834257-16834625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 258
               

               
Conread position:
               
74-424
               

               
Cow position:
               
chr14:20640694-20640326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 197
               

               
Conread position:
               
74-424
               

               
Cow position:
               
chr14:21357493-21357847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 174
               

               
Conread position:
               
74-424
               

               
Cow position:
               
chr14:26097758-26097393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 188
               

               
Conread position:
               
74-424
               

               
Cow position:
               
chr14:26442405-26442043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 197
               

               
Conread position:
               
74-424
               

               
Cow position:
               
chr14:34199908-34199547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 70
               

               
Conread position:
               
74-424
               

               
Cow position:
               
chr14:36166878-36167228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
74-424
               

               
Cow position:
               
chr14:41749824-41749469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
78, 152
               

               
Conread position:
               
74-424
               

               
Cow position:
               
chr14:42596335-42596672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
116, 46
               

               
Conread position:
               
75-282
               

               
Cow position:
               
chr14:11056794-11056586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
62, 125
               

               
Conread position:
               
75-384
               

               
Cow position:
               
chr14:20385049-20384726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 194
               

               
Conread position:
               
75-423
               

               
Cow position:
               
chr14:3194802-3195145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
87, 68
               

               
Conread position:
               
75-424
               

               
Cow position:
               
chr14:39770291-39769936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 188
               

               
Conread position:
               
76-307
               

               
Cow position:
               
chr14:12035347-12035587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
71, 190
               

               
Conread position:
               
76-422
               

               
Cow position:
               
chr14:9539248-9538902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
103, 69
               

               
Conread position:
               
77-385
               

               
Cow position:
               
chr14:2959462-2959776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
124, 75
               

               
Conread position:
               
78-277
               

               
Cow position:
               
chr14:6226674-6226478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
78-279
               

               
Cow position:
               
chr14:7036418-7036204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
75, 193
               

               
Conread position:
               
78-286
               

               
Cow position:
               
chr14:34331387-34331167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
75, 169
               

               
Conread position:
               
78-287
               

               
Cow position:
               
chr14:35503299-35503523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
34, 116
               

               
Conread position:
               
78-289
               

               
Cow position:
               
chr14:42436964-42437187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
67, 190
               

               
Conread position:
               
78-309
               

               
Cow position:
               
chr14:4203159-4202912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
75, 195
               

               
Conread position:
               
78-310
               

               
Cow position:
               
chr14:4877290-4877049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 190
               

               
Conread position:
               
78-329
               

               
Cow position:
               
chr14:4025061-4024798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
97, 12
               

               
Conread position:
               
78-329
               

               
Cow position:
               
chr14:19618811-19618548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
72, 11
               

               
Conread position:
               
78-333
               

               
Cow position:
               
chr14:1868444-1868181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 192
               

               
Conread position:
               
78-334
               

               
Cow position:
               
chr14:27275102-27275377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
64, 192
               

               
Conread position:
               
78-335
               

               
Cow position:
               
chr14:36254757-36254496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
75, 86
               

               
Conread position:
               
78-336
               

               
Cow position:
               
chr14:33830241-33830508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 124
               

               
Conread position:
               
78-343
               

               
Cow position:
               
chr14:15825221-15825503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
78-384
               

               
Cow position:
               
chr14:6175536-6175838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 66
               

               
Conread position:
               
78-385
               

               
Cow position:
               
chr14:24387380-24387707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 198
               

               
Conread position:
               
78-385
               

               
Cow position:
               
chr14:33309564-33309253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 126
               

               
Conread position:
               
78-389
               

               
Cow position:
               
chr14:50362733-50363065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
70, 185
               

               
Conread position:
               
78-404
               

               
Cow position:
               
chr14:50055338-50055676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
78-407
               

               
Cow position:
               
chr14:12036887-12036565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
203, 78
               

               
Conread position:
               
78-407
               

               
Cow position:
               
chr14:44848430-44848106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
72, 182
               

               
Conread position:
               
78-408
               

               
Cow position:
               
chr14:10609619-10609969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
69, 197
               

               
Conread position:
               
78-409
               

               
Cow position:
               
chr14:19129445-19129791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 194
               

               
Conread position:
               
78-412
               

               
Cow position:
               
chr14:21964076-21964403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 76
               

               
Conread position:
               
78-414
               

               
Cow position:
               
chr14:7695205-7695535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 178
               

               
Conread position:
               
78-415
               

               
Cow position:
               
chr14:47672942-47672597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 186
               

               
Conread position:
               
78-422
               

               
Cow position:
               
chr14:12244446-12244093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
77, 196
               

               
Conread position:
               
78-422
               

               
Cow position:
               
chr14:20712748-20712389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
78-423
               

               
Cow position:
               
chr14:26116002-26116357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr14:10702899-10702539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
65, 12
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr14:19594198-19593845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
70, 189
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr14:19851993-19851625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
71, 12
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr14:20016768-20016412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
75, 152
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr14:25403996-25403649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 155
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr14:33714734-33714393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
76, 28
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr14:35381531-35381883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 26
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr14:35420825-35420462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr14:35544565-35544220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 111
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr14:38144168-38143819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 185
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr14:49086246-49086598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
92, 188
               

               
Conread position:
               
78-425
               

               
Cow position:
               
chr14:14466517-14466184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 73
               

               
Conread position:
               
78-425
               

               
Cow position:
               
chr14:45052382-45052734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
72, 188
               

               
Conread position:
               
78-426
               

               
Cow position:
               
chr14:4990941-4991288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 190
               

               
Conread position:
               
78-426
               

               
Cow position:
               
chr14:6735924-6735569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 48
               

               
Conread position:
               
78-426
               

               
Cow position:
               
chr14:28304845-28304489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 18
               

               
Conread position:
               
80-231
               

               
Cow position:
               
chr14:803627-803791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 52
               

               
Conread position:
               
80-252
               

               
Cow position:
               
chr14:4282565-4282383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
65, 108
               

               
Conread position:
               
80-288
               

               
Cow position:
               
chr14:22941787-22941562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
73, 195
               

               
Conread position:
               
80-310
               

               
Cow position:
               
chr14:46685248-46685480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
82, 41
               

               
Conread position:
               
80-331
               

               
Cow position:
               
chr14:5572883-5573148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
9, 178
               

               
Conread position:
               
80-387
               

               
Cow position:
               
chr14:33338533-33338221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
78, 17
               

               
Conread position:
               
80-408
               

               
Cow position:
               
chr14:17841350-17841008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 24
               

               
Conread position:
               
80-409
               

               
Cow position:
               
chr14:24981400-24981734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 183
               

               
Conread position:
               
80-411
               

               
Cow position:
               
chr14:13426791-13427100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
70, 170
               

               
Conread position:
               
80-415
               

               
Cow position:
               
chr14:35498549-35498215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
6, 11
               

               
Conread position:
               
80-421
               

               
Cow position:
               
chr14:39926149-39926483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 155
               

               
Conread position:
               
80-422
               

               
Cow position:
               
chr14:24922042-24922399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 10
               

               
Conread position:
               
80-424
               

               
Cow position:
               
chr14:13385310-13385668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
67, 10
               

               
Conread position:
               
80-424
               

               
Cow position:
               
chr14:14187273-14187628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 189
               

               
Conread position:
               
80-424
               

               
Cow position:
               
chr14:20600326-20600676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 156
               

               
Conread position:
               
80-424
               

               
Cow position:
               
chr14:22583094-22583433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
80-424
               

               
Cow position:
               
chr14:24236765-24237113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 168
               

               
Conread position:
               
80-424
               

               
Cow position:
               
chr14:44257864-44258209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
60, 194
               

               
Conread position:
               
80-424
               

               
Cow position:
               
chr14:45605039-45605384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
80-424
               

               
Cow position:
               
chr14:48740928-48740591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 36
               

               
Conread position:
               
80-426
               

               
Cow position:
               
chr14:42155030-42154664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 54
               

               
Conread position:
               
82-336
               

               
Cow position:
               
chr14:46973382-46973641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
75, 184
               

               
Conread position:
               
82-380
               

               
Cow position:
               
chr14:1978130-1977828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 189
               

               
Conread position:
               
82-389
               

               
Cow position:
               
chr14:9837951-9837632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
20, 176
               

               
Conread position:
               
82-424
               

               
Cow position:
               
chr14:25779045-25779389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 90
               

               
Conread position:
               
82-424
               

               
Cow position:
               
chr14:26433299-26432946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
71, 186
               

               
Conread position:
               
82-424
               

               
Cow position:
               
chr14:41472027-41471675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 227
               

               
Conread position:
               
83-424
               

               
Cow position:
               
chr14:7582505-7582146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
7, 14
               

               
Conread position:
               
83-424
               

               
Cow position:
               
chr14:31399540-31399871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
235, 34
               

               
Conread position:
               
84-289
               

               
Cow position:
               
chr14:41302885-41302670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
71, 184
               

               
Conread position:
               
84-412
               

               
Cow position:
               
chr14:6541780-6541439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
14, 186
               

               
Conread position:
               
85-424
               

               
Cow position:
               
chr14:2967684-2967360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
201, 48
               

               
Conread position:
               
85-424
               

               
Cow position:
               
chr14:15913595-15913259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
16, 83
               

               
Conread position:
               
87-367
               

               
Cow position:
               
chr14:25001983-25002274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
66, 185
               

               
Conread position:
               
87-406
               

               
Cow position:
               
chr14:25378546-25378214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
89-424
               

               
Cow position:
               
chr14:22966706-22967046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 15
               

               
Conread position:
               
90-425
               

               
Cow position:
               
chr14:42784914-42785235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
14, 149
               

               
Conread position:
               
94-416
               

               
Cow position:
               
chr14:27988610-27988934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
94-424
               

               
Cow position:
               
chr14:10090513-10090851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
96-423
               

               
Cow position:
               
chr14:28987661-28987985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
97-424
               

               
Cow position:
               
chr14:18449050-18448712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
76, 20
               

               
Conread position:
               
99-336
               

               
Cow position:
               
chr14:47276737-47276491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 71
               

               
Conread position:
               
99-339
               

               
Cow position:
               
chr14:8946124-8945870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
52, 170
               

               
Conread position:
               
99-365
               

               
Cow position:
               
chr14:26191144-26190860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
53, 172
               

               
Conread position:
               
99-366
               

               
Cow position:
               
chr14:14949253-14948973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
54, 130
               

               
Conread position:
               
99-367
               

               
Cow position:
               
chr14:20302041-20301769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
56, 80
               

               
Conread position:
               
99-379
               

               
Cow position:
               
chr14:11846460-11846751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
58, 33
               

               
Conread position:
               
99-388
               

               
Cow position:
               
chr14:14979752-14979444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
31, 178
               

               
Conread position:
               
99-415
               

               
Cow position:
               
chr14:11810598-11810284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
55, 70
               

               
Conread position:
               
99-418
               

               
Cow position:
               
chr14:20010351-20010022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 172
               

               
Conread position:
               
99-424
               

               
Cow position:
               
chr14:25681887-25682240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
54, 169
               

               
Conread position:
               
99-424
               

               
Cow position:
               
chr14:28795632-28795971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
52, 132
               

               
Conread position:
               
99-424
               

               
Cow position:
               
chr14:41809693-41809357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 166
               

               
Conread position:
               
99-424
               

               
Cow position:
               
chr14:43249548-43249880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 84
               

               
Conread position:
               
99-424
               

               
Cow position:
               
chr14:47584701-47584354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
33, 175
               

               
Conread position:
               
99-426
               

               
Cow position:
               
chr14:18485293-18484944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 35
               

               
Conread position:
               
100-411
               

               
Cow position:
               
chr14:41325486-41325154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
53, 179
               

               
Conread position:
               
100-424
               

               
Cow position:
               
chr14:3564245-3564568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 166
               

               
Conread position:
               
100-424
               

               
Cow position:
               
chr14:49929783-49929440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
42, 172
               

               
Conread position:
               
104-424
               

               
Cow position:
               
chr14:36437521-36437189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
49, 126
               

               
Conread position:
               
105-377
               

               
Cow position:
               
chr14:30017319-30017039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 69
               

               
Conread position:
               
106-424
               

               
Cow position:
               
chr14:106600-106280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 60
               

               
Conread position:
               
107-376
               

               
Cow position:
               
chr14:33643809-33643544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 157
               

               
Conread position:
               
112-381
               

               
Cow position:
               
chr14:29029802-29030080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
38, 158
               

               
Conread position:
               
113-407
               

               
Cow position:
               
chr14:47591939-47591641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
113-412
               

               
Cow position:
               
chr14:42918089-42918373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 39
               

               
Conread position:
               
115-378
               

               
Cow position:
               
chr14:27919759-27919489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
47, 119
               

               
Conread position:
               
115-424
               

               
Cow position:
               
chr14:34666623-34666940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
51, 149
               

               
Conread position:
               
128-423
               

               
Cow position:
               
chr14:24837948-24837669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
136, 6
               

               
Conread position:
               
131-424
               

               
Cow position:
               
chr14:7558445-7558137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 223
               

               
Conread position:
               
138-379
               

               
Cow position:
               
chr14:31479339-31479104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 70
               

               
Conread position:
               
140-354
               

               
Cow position:
               
chr14:41966253-41966469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
141-424
               

               
Cow position:
               
chr14:15032760-15033051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 133
               

               
Conread position:
               
145-340
               

               
Cow position:
               
chr14:23761881-23762095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 127
               

               
Conread position:
               
146-379
               

               
Cow position:
               
chr14:34777553-34777329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
22, 27
               

               
Conread position:
               
147-423
               

               
Cow position:
               
chr14:10912953-10912679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
18, 114
               

               
Conread position:
               
147-424
               

               
Cow position:
               
chr14:31734843-31734558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
10, 124
               

               
Conread position:
               
147-424
               

               
Cow position:
               
chr14:43453163-43452885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
135, 19
               

               
Conread position:
               
148-310
               

               
Cow position:
               
chr14:19513392-19513237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
60, 13
               

               
Conread position:
               
149-340
               

               
Cow position:
               
chr14:14580883-14581081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
17, 113
               

               
Conread position:
               
149-391
               

               
Cow position:
               
chr14:20483439-20483205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
17, 10
               

               
Conread position:
               
150-424
               

               
Cow position:
               
chr14:49563646-49563374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
7, 105
               

               
Conread position:
               
151-411
               

               
Cow position:
               
chr14:6419282-6419032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
44, 108
               

               
Conread position:
               
153-278
               

               
Cow position:
               
chr14:16761549-16761423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 85
               

               
Conread position:
               
156-421
               

               
Cow position:
               
chr14:14835103-14834835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
143, 21
               

               
Conread position:
               
157-409
               

               
Cow position:
               
chr14:39422566-39422307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
162-309
               

               
Cow position:
               
chr14:38673601-38673450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
165-416
               

               
Cow position:
               
chr14:24785979-24786219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
165-424
               

               
Cow position:
               
chr14:33828196-33828444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 94
               

               
Conread position:
               
165-424
               

               
Cow position:
               
chr14:40347127-40346883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
49, 30
               

               
Conread position:
               
165-426
               

               
Cow position:
               
chr14:7482090-7482352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 97
               

               
Conread position:
               
166-412
               

               
Cow position:
               
chr14:8964583-8964826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
166-426
               

               
Cow position:
               
chr14:39807420-39807162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
167-411
               

               
Cow position:
               
chr14:15518340-15518095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
114, 89
               

               
Conread position:
               
170-422
               

               
Cow position:
               
chr14:12250157-12249904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 95
               

               
Conread position:
               
172-300
               

               
Cow position:
               
chr14:37467721-37467589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
172-417
               

               
Cow position:
               
chr14:23464775-23464527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
172-424
               

               
Cow position:
               
chr14:22381512-22381260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 90
               

               
Conread position:
               
172-426
               

               
Cow position:
               
chr14:27312464-27312721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 92
               

               
Conread position:
               
173-424
               

               
Cow position:
               
chr14:11820078-11819829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 85
               

               
Conread position:
               
174-424
               

               
Cow position:
               
chr14:28090932-28090677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 88
               

               
Conread position:
               
183-411
               

               
Cow position:
               
chr14:48447109-48446878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
29, 77
               

               
Conread position:
               
183-421
               

               
Cow position:
               
chr14:17397542-17397313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
129, 12
               

               
Conread position:
               
183-424
               

               
Cow position:
               
chr14:29771825-29772064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
19, 77
               

               
Conread position:
               
187-330
               

               
Cow position:
               
chr14:50518916-50518773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
188-424
               

               
Cow position:
               
chr14:5502099-5501857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
94, 24
               

               
Conread position:
               
190-300
               

               
Cow position:
               
chr14:23591299-23591406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
91, 9
               

               
Conread position:
               
190-424
               

               
Cow position:
               
chr14:445480-445693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
10, 48
               

               
Conread position:
               
191-368
               

               
Cow position:
               
chr14:12324485-12324663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
191-424
               

               
Cow position:
               
chr14:19221945-19222174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 69
               

               
Conread position:
               
191-425
               

               
Cow position:
               
chr14:41756323-41756554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
90, 66
               

               
Conread position:
               
192-411
               

               
Cow position:
               
chr14:13582686-13582478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
94, 67
               

               
Conread position:
               
194-369
               

               
Cow position:
               
chr14:22952926-22952758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
86, 5
               

               
Conread position:
               
194-422
               

               
Cow position:
               
chr14:50027287-50027507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
86, 66
               

               
Conread position:
               
194-424
               

               
Cow position:
               
chr14:37934547-37934314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
95, 21
               

               
Conread position:
               
195-424
               

               
Cow position:
               
chr14:19633247-19633477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
117, 61
               

               
Conread position:
               
195-424
               

               
Cow position:
               
chr14:24991891-24992107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 15
               

               
Conread position:
               
196-304
               

               
Cow position:
               
chr14:33341824-33341934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
7, 62
               

               
Conread position:
               
196-370
               

               
Cow position:
               
chr14:42277014-42277179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
196-424
               

               
Cow position:
               
chr14:6555066-6554843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
196-424
               

               
Cow position:
               
chr14:27305218-27305451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
10, 66
               

               
Conread position:
               
196-424
               

               
Cow position:
               
chr14:35712110-35711885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
139, 115
               

               
Conread position:
               
196-424
               

               
Cow position:
               
chr14:37624416-37624193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
196-426
               

               
Cow position:
               
chr14:8754398-8754623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 14
               

               
Conread position:
               
198-422
               

               
Cow position:
               
chr14:12614023-12613810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
83, 58
               

               
Conread position:
               
199-424
               

               
Cow position:
               
chr14:26880735-26880511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
90, 60
               

               
Conread position:
               
199-424
               

               
Cow position:
               
chr14:36151478-36151687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
112, 61
               

               
Conread position:
               
200-381
               

               
Cow position:
               
chr14:35021969-35022154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
88, 57
               

               
Conread position:
               
201-362
               

               
Cow position:
               
chr14:37435224-37435063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
80, 49
               

               
Conread position:
               
201-400
               

               
Cow position:
               
chr14:15514088-15514290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
6, 57
               

               
Conread position:
               
201-412
               

               
Cow position:
               
chr14:3437067-3437273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
111, 79
               

               
Conread position:
               
202-423
               

               
Cow position:
               
chr14:19624160-19624384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 57
               

               
Conread position:
               
203-420
               

               
Cow position:
               
chr14:4227129-4226904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
78, 53
               

               
Conread position:
               
203-424
               

               
Cow position:
               
chr14:44252986-44253189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
204-343
               

               
Cow position:
               
chr14:28924462-28924604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
81, 53
               

               
Conread position:
               
204-424
               

               
Cow position:
               
chr14:50589306-50589097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
81, 14
               

               
Conread position:
               
205-416
               

               
Cow position:
               
chr14:33538845-33538638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 52
               

               
Conread position:
               
205-423
               

               
Cow position:
               
chr14:35651126-35650912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
79, 19
               

               
Conread position:
               
205-424
               

               
Cow position:
               
chr14:17013583-17013803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
72, 11
               

               
Conread position:
               
205-424
               

               
Cow position:
               
chr14:47483771-47483990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
105, 33
               

               
Conread position:
               
206-420
               

               
Cow position:
               
chr14:25885588-25885790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
129, 57
               

               
Conread position:
               
206-424
               

               
Cow position:
               
chr14:12484221-12484018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
206-426
               

               
Cow position:
               
chr14:44383125-44382903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
82, 53
               

               
Conread position:
               
208-424
               

               
Cow position:
               
chr14:46735386-46735607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
58, 8
               

               
Conread position:
               
212-416
               

               
Cow position:
               
chr14:17899572-17899771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
69, 12
               

               
Conread position:
               
215-424
               

               
Cow position:
               
chr14:39518783-39518990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
73, 9
               

               
Conread position:
               
216-325
               

               
Cow position:
               
chr14:8936562-8936448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
65, 41
               

               
Conread position:
               
216-413
               

               
Cow position:
               
chr14:41190787-41190596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
74, 44
               

               
Conread position:
               
216-418
               

               
Cow position:
               
chr14:8006238-8006049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
66, 41
               

               
Conread position:
               
216-423
               

               
Cow position:
               
chr14:48492701-48492491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
225-424
               

               
Cow position:
               
chr14:40183137-40183339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
64, 32
               

               
Conread position:
               
226-424
               

               
Cow position:
               
chr14:24893855-24894055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
235-424
               

               
Cow position:
               
chr14:35607351-35607159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
54, 109
               

               
Conread position:
               
237-426
               

               
Cow position:
               
chr14:34330654-34330836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
249-412
               

               
Cow position:
               
chr14:21534913-21534757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
10, 0
               
Show alignments to all cow chromosomes.