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Cow genome map

           
Conread name:
           
Lym1-jns24_F09.f
        

               
Conread position:
               
1-345
               

               
Cow position:
               
chr9:47500374-47500001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
70, 280
               

               
Conread position:
               
2-233
               

               
Cow position:
               
chr9:29819553-29819808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
66, 118
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr9:20896746-20897069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
53, 101
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr9:42037499-42037851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
82, 119
               

               
Conread position:
               
2-397
               

               
Cow position:
               
chr9:5209429-5209837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
2-407
               

               
Cow position:
               
chr9:18111015-18110601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
70, 53
               

               
Conread position:
               
2-411
               

               
Cow position:
               
chr9:23042626-23043043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chr9:5433472-5433912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 282
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chr9:22318188-22318619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 279
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chr9:32266540-32266114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
58, 98
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chr9:34309874-34310315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
70, 93
               

               
Conread position:
               
2-425
               

               
Cow position:
               
chr9:28983026-28983463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 275
               

               
Conread position:
               
3-284
               

               
Cow position:
               
chr9:5398982-5399280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
72, 274
               

               
Conread position:
               
4-417
               

               
Cow position:
               
chr9:32732835-32732411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 146
               

               
Conread position:
               
5-149
               

               
Cow position:
               
chr9:18082045-18081903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
5-152
               

               
Cow position:
               
chr9:39654255-39654406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr9:23797093-23797328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
145, 23
               

               
Conread position:
               
5-278
               

               
Cow position:
               
chr9:18439326-18439050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 161
               

               
Conread position:
               
5-287
               

               
Cow position:
               
chr9:1867301-1867594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
5-294
               

               
Cow position:
               
chr9:27347647-27347948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
11, 251
               

               
Conread position:
               
5-310
               

               
Cow position:
               
chr9:6852221-6851899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
78, 29
               

               
Conread position:
               
5-310
               

               
Cow position:
               
chr9:25556813-25557134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 254
               

               
Conread position:
               
5-329
               

               
Cow position:
               
chr9:1370765-1371123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
62, 31
               

               
Conread position:
               
5-350
               

               
Cow position:
               
chr9:39428951-39428589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 117
               

               
Conread position:
               
5-353
               

               
Cow position:
               
chr9:15684938-15684578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
63, 103
               

               
Conread position:
               
5-366
               

               
Cow position:
               
chr9:42264051-42264444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
61, 112
               

               
Conread position:
               
5-370
               

               
Cow position:
               
chr9:1532484-1532105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
66, 31
               

               
Conread position:
               
5-371
               

               
Cow position:
               
chr9:49847046-49847422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
44, 125
               

               
Conread position:
               
5-373
               

               
Cow position:
               
chr9:1916138-1916517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
96, 266
               

               
Conread position:
               
5-374
               

               
Cow position:
               
chr9:8617679-8618023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
140, 45
               

               
Conread position:
               
5-374
               

               
Cow position:
               
chr9:62724372-62724777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
44, 67
               

               
Conread position:
               
5-401
               

               
Cow position:
               
chr9:58979235-58979659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 158
               

               
Conread position:
               
5-411
               

               
Cow position:
               
chr9:41789132-41789546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 29
               

               
Conread position:
               
5-411
               

               
Cow position:
               
chr9:41995581-41995982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 87
               

               
Conread position:
               
5-412
               

               
Cow position:
               
chr9:28947716-28948121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 71
               

               
Conread position:
               
5-415
               

               
Cow position:
               
chr9:47868854-47869278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 164
               

               
Conread position:
               
5-416
               

               
Cow position:
               
chr9:61847285-61846877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 154
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr9:3387546-3387968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 82
               

               
Conread position:
               
5-423
               

               
Cow position:
               
chr9:19902921-19903332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 50
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr9:1984654-1984241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 127
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr9:3169669-3169240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 32
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr9:4861225-4861670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 362
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr9:5227330-5226884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 150
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr9:5327092-5327532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 246
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr9:10667172-10666744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
48, 123
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr9:20579758-20579345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
61, 164
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr9:26085907-26086348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 43
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr9:33101275-33100861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
74, 167
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr9:34203977-34204418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
7, 95
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr9:35100737-35101148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 106
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr9:35375292-35375702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr9:39152831-39152406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
63, 94
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr9:43037331-43037764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
65, 118
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr9:50544787-50544352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
62, 116
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr9:50607100-50606672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
63, 228
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr9:54437108-54437533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
15, 119
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr9:56453176-56453614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 172
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr9:58669230-58669660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
65, 124
               

               
Conread position:
               
5-424
               

               
Cow position:
               
chr9:63597686-63598102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
138, 112
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr9:5392903-5393333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 206
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr9:5500694-5501132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 41
               

               
Conread position:
               
5-426
               

               
Cow position:
               
chr9:54681351-54681784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
6-327
               

               
Cow position:
               
chr9:25468905-25469223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
112, 60
               

               
Conread position:
               
6-424
               

               
Cow position:
               
chr9:34468728-34468312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 236
               

               
Conread position:
               
6-424
               

               
Cow position:
               
chr9:64091530-64091969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
8-151
               

               
Cow position:
               
chr9:48635051-48634901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
8-388
               

               
Cow position:
               
chr9:389164-388770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 24
               

               
Conread position:
               
8-419
               

               
Cow position:
               
chr9:16745533-16745953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 49
               

               
Conread position:
               
8-422
               

               
Cow position:
               
chr9:33668577-33668987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
50, 269
               

               
Conread position:
               
8-424
               

               
Cow position:
               
chr9:41679595-41680015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 266
               

               
Conread position:
               
8-424
               

               
Cow position:
               
chr9:42497661-42498110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 176
               

               
Conread position:
               
10-422
               

               
Cow position:
               
chr9:9823646-9823240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 10
               

               
Conread position:
               
11-308
               

               
Cow position:
               
chr9:2887829-2888137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 237
               

               
Conread position:
               
11-323
               

               
Cow position:
               
chr9:55321490-55321822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
62, 50
               

               
Conread position:
               
11-325
               

               
Cow position:
               
chr9:38289458-38289144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
155, 66
               

               
Conread position:
               
11-327
               

               
Cow position:
               
chr9:32115744-32115422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 120
               

               
Conread position:
               
11-333
               

               
Cow position:
               
chr9:11123644-11123293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
60, 280
               

               
Conread position:
               
11-421
               

               
Cow position:
               
chr9:19637783-19637361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 72
               

               
Conread position:
               
11-424
               

               
Cow position:
               
chr9:5757141-5756722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 171
               

               
Conread position:
               
15-363
               

               
Cow position:
               
chr9:17799475-17799850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 271
               

               
Conread position:
               
15-424
               

               
Cow position:
               
chr9:6879641-6880051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 49
               

               
Conread position:
               
16-279
               

               
Cow position:
               
chr9:41486373-41486103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
136, 55
               

               
Conread position:
               
16-411
               

               
Cow position:
               
chr9:26057588-26057180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
16-424
               

               
Cow position:
               
chr9:8599466-8599884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 225
               

               
Conread position:
               
16-424
               

               
Cow position:
               
chr9:24997649-24997235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 18
               

               
Conread position:
               
16-424
               

               
Cow position:
               
chr9:26403636-26404070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 265
               

               
Conread position:
               
16-426
               

               
Cow position:
               
chr9:20090901-20091321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
17-423
               

               
Cow position:
               
chr9:54206464-54206052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
50, 82
               

               
Conread position:
               
17-424
               

               
Cow position:
               
chr9:3931818-3932248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
39, 109
               

               
Conread position:
               
17-424
               

               
Cow position:
               
chr9:59795416-59794999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 83
               

               
Conread position:
               
18-418
               

               
Cow position:
               
chr9:20961398-20961013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
49, 133
               

               
Conread position:
               
18-422
               

               
Cow position:
               
chr9:8950758-8951181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
19-424
               

               
Cow position:
               
chr9:41958915-41958514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 51
               

               
Conread position:
               
20-325
               

               
Cow position:
               
chr9:51721042-51720719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 256
               

               
Conread position:
               
20-411
               

               
Cow position:
               
chr9:32676537-32676954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 262
               

               
Conread position:
               
21-423
               

               
Cow position:
               
chr9:36491033-36490615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
24-415
               

               
Cow position:
               
chr9:9200854-9200453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 79
               

               
Conread position:
               
32-287
               

               
Cow position:
               
chr9:2976762-2977008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
123, 78
               

               
Conread position:
               
33-424
               

               
Cow position:
               
chr9:23388791-23388395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
34-329
               

               
Cow position:
               
chr9:19555258-19555565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 42
               

               
Conread position:
               
37-347
               

               
Cow position:
               
chr9:19493574-19493255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 24
               

               
Conread position:
               
42-301
               

               
Cow position:
               
chr9:33696915-33697186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
44-386
               

               
Cow position:
               
chr9:3186019-3186386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
44-410
               

               
Cow position:
               
chr9:9596060-9595686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 14
               

               
Conread position:
               
44-424
               

               
Cow position:
               
chr9:4629999-4630383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
45-409
               

               
Cow position:
               
chr9:64637442-64637811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
12, 187
               

               
Conread position:
               
50-329
               

               
Cow position:
               
chr9:41728158-41728446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
103, 68
               

               
Conread position:
               
50-426
               

               
Cow position:
               
chr9:51204625-51205004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
24, 7
               

               
Conread position:
               
55-422
               

               
Cow position:
               
chr9:5319522-5319908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
11, 80
               

               
Conread position:
               
60-248
               

               
Cow position:
               
chr9:55532721-55532922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 183
               

               
Conread position:
               
63-424
               

               
Cow position:
               
chr9:29035088-29034755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 15
               

               
Conread position:
               
64-356
               

               
Cow position:
               
chr9:48627940-48628244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
89, 184
               

               
Conread position:
               
64-406
               

               
Cow position:
               
chr9:62399874-62400219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
87, 170
               

               
Conread position:
               
64-424
               

               
Cow position:
               
chr9:20416595-20416231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 171
               

               
Conread position:
               
65-325
               

               
Cow position:
               
chr9:12226064-12225800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
65-410
               

               
Cow position:
               
chr9:11068565-11068202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 211
               

               
Conread position:
               
66-277
               

               
Cow position:
               
chr9:44396576-44396795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
67-278
               

               
Cow position:
               
chr9:26310422-26310639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
70-303
               

               
Cow position:
               
chr9:36843711-36843949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
83, 192
               

               
Conread position:
               
70-410
               

               
Cow position:
               
chr9:8546248-8546585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 149
               

               
Conread position:
               
70-423
               

               
Cow position:
               
chr9:41513550-41513899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 40
               

               
Conread position:
               
70-424
               

               
Cow position:
               
chr9:11299762-11299416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 75
               

               
Conread position:
               
70-426
               

               
Cow position:
               
chr9:5509643-5510007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
71-289
               

               
Cow position:
               
chr9:51557566-51557351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
104, 15
               

               
Conread position:
               
71-411
               

               
Cow position:
               
chr9:25972418-25972767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 199
               

               
Conread position:
               
71-420
               

               
Cow position:
               
chr9:5594422-5594777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 183
               

               
Conread position:
               
71-422
               

               
Cow position:
               
chr9:64155932-64155577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 132
               

               
Conread position:
               
71-424
               

               
Cow position:
               
chr9:7634190-7634549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 199
               

               
Conread position:
               
71-424
               

               
Cow position:
               
chr9:10144556-10144191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 196
               

               
Conread position:
               
71-424
               

               
Cow position:
               
chr9:44467420-44467068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 62
               

               
Conread position:
               
71-426
               

               
Cow position:
               
chr9:52407080-52407453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 8
               

               
Conread position:
               
72-424
               

               
Cow position:
               
chr9:45285615-45285250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
82, 199
               

               
Conread position:
               
72-424
               

               
Cow position:
               
chr9:46316861-46316507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
73-279
               

               
Cow position:
               
chr9:34410475-34410258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
40, 30
               

               
Conread position:
               
73-290
               

               
Cow position:
               
chr9:32670026-32669799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
67, 195
               

               
Conread position:
               
73-297
               

               
Cow position:
               
chr9:33114267-33114501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
80, 157
               

               
Conread position:
               
73-300
               

               
Cow position:
               
chr9:11304154-11303919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
82, 168
               

               
Conread position:
               
73-311
               

               
Cow position:
               
chr9:5456254-5456004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
74, 130
               

               
Conread position:
               
73-340
               

               
Cow position:
               
chr9:37677815-37678089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
101, 130
               

               
Conread position:
               
73-355
               

               
Cow position:
               
chr9:16811733-16811447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
80, 138
               

               
Conread position:
               
73-356
               

               
Cow position:
               
chr9:28392105-28391818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
23, 106
               

               
Conread position:
               
73-369
               

               
Cow position:
               
chr9:27279230-27279544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
79, 154
               

               
Conread position:
               
73-381
               

               
Cow position:
               
chr9:58972573-58972255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
73-394
               

               
Cow position:
               
chr9:50139206-50139532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 131
               

               
Conread position:
               
73-409
               

               
Cow position:
               
chr9:20322172-20321850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
73-411
               

               
Cow position:
               
chr9:33597907-33598249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 129
               

               
Conread position:
               
73-411
               

               
Cow position:
               
chr9:55118008-55118346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 188
               

               
Conread position:
               
73-423
               

               
Cow position:
               
chr9:9753469-9753113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
73-424
               

               
Cow position:
               
chr9:10118732-10118382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
103, 23
               

               
Conread position:
               
73-424
               

               
Cow position:
               
chr9:17741020-17740662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 56
               

               
Conread position:
               
73-424
               

               
Cow position:
               
chr9:28773060-28773398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
73-424
               

               
Cow position:
               
chr9:34958135-34957771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 159
               

               
Conread position:
               
73-424
               

               
Cow position:
               
chr9:62656724-62657073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
61, 171
               

               
Conread position:
               
73-425
               

               
Cow position:
               
chr9:37069638-37069287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 94
               

               
Conread position:
               
73-426
               

               
Cow position:
               
chr9:14974998-14974643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 105
               

               
Conread position:
               
73-426
               

               
Cow position:
               
chr9:18380786-18381143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
72, 114
               

               
Conread position:
               
73-426
               

               
Cow position:
               
chr9:55075207-55074854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 190
               

               
Conread position:
               
74-232
               

               
Cow position:
               
chr9:8834205-8834038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
63, 92
               

               
Conread position:
               
74-255
               

               
Cow position:
               
chr9:38941510-38941317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
74-278
               

               
Cow position:
               
chr9:6189443-6189235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
88, 96
               

               
Conread position:
               
74-285
               

               
Cow position:
               
chr9:10819906-10819689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
76, 192
               

               
Conread position:
               
74-288
               

               
Cow position:
               
chr9:4263167-4262946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
79, 25
               

               
Conread position:
               
74-310
               

               
Cow position:
               
chr9:26477139-26477385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
74-336
               

               
Cow position:
               
chr9:4341237-4340972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
62, 109
               

               
Conread position:
               
74-339
               

               
Cow position:
               
chr9:9654385-9654112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
93, 190
               

               
Conread position:
               
74-370
               

               
Cow position:
               
chr9:53762616-53762928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
80, 190
               

               
Conread position:
               
74-376
               

               
Cow position:
               
chr9:4268060-4267747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
63, 159
               

               
Conread position:
               
74-380
               

               
Cow position:
               
chr9:45141678-45141368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
77, 193
               

               
Conread position:
               
74-388
               

               
Cow position:
               
chr9:33119966-33119637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 197
               

               
Conread position:
               
74-400
               

               
Cow position:
               
chr9:3782292-3782620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
110, 32
               

               
Conread position:
               
74-405
               

               
Cow position:
               
chr9:34375002-34374667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
79, 90
               

               
Conread position:
               
74-407
               

               
Cow position:
               
chr9:26279247-26278909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 152
               

               
Conread position:
               
74-411
               

               
Cow position:
               
chr9:34286721-34287062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
79, 198
               

               
Conread position:
               
74-416
               

               
Cow position:
               
chr9:51620367-51620708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 118
               

               
Conread position:
               
74-421
               

               
Cow position:
               
chr9:9403257-9402907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
53, 134
               

               
Conread position:
               
74-423
               

               
Cow position:
               
chr9:24887128-24887477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 124
               

               
Conread position:
               
74-424
               

               
Cow position:
               
chr9:5763708-5763349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
74-424
               

               
Cow position:
               
chr9:5836067-5836445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 289
               

               
Conread position:
               
74-424
               

               
Cow position:
               
chr9:6952023-6952371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
77, 92
               

               
Conread position:
               
74-424
               

               
Cow position:
               
chr9:9199857-9199504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 39
               

               
Conread position:
               
74-424
               

               
Cow position:
               
chr9:13205644-13205290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
71, 51
               

               
Conread position:
               
74-424
               

               
Cow position:
               
chr9:17872188-17871827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 158
               

               
Conread position:
               
74-424
               

               
Cow position:
               
chr9:18342655-18343003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
102, 78
               

               
Conread position:
               
74-424
               

               
Cow position:
               
chr9:28747598-28747241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 192
               

               
Conread position:
               
74-424
               

               
Cow position:
               
chr9:57897188-57896844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
86, 78
               

               
Conread position:
               
74-424
               

               
Cow position:
               
chr9:61997681-61997315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 41
               

               
Conread position:
               
74-426
               

               
Cow position:
               
chr9:28726808-28726443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 206
               

               
Conread position:
               
75-316
               

               
Cow position:
               
chr9:49293220-49292971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
75-340
               

               
Cow position:
               
chr9:8524782-8525038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
151, 60
               

               
Conread position:
               
75-424
               

               
Cow position:
               
chr9:20847858-20848217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 41
               

               
Conread position:
               
76-231
               

               
Cow position:
               
chr9:58662168-58662329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 58
               

               
Conread position:
               
76-366
               

               
Cow position:
               
chr9:1972872-1973165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 92
               

               
Conread position:
               
76-424
               

               
Cow position:
               
chr9:31346874-31347234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 200
               

               
Conread position:
               
76-424
               

               
Cow position:
               
chr9:34697375-34697015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 186
               

               
Conread position:
               
76-424
               

               
Cow position:
               
chr9:42446059-42445704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 196
               

               
Conread position:
               
78-208
               

               
Cow position:
               
chr9:26859281-26859412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
83, 67
               

               
Conread position:
               
78-208
               

               
Cow position:
               
chr9:52258136-52258003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
91, 58
               

               
Conread position:
               
78-243
               

               
Cow position:
               
chr9:42298118-42298286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
88, 54
               

               
Conread position:
               
78-254
               

               
Cow position:
               
chr9:23956054-23955870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
78-255
               

               
Cow position:
               
chr9:38645418-38645228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
63, 49
               

               
Conread position:
               
78-255
               

               
Cow position:
               
chr9:52598795-52598609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
78-257
               

               
Cow position:
               
chr9:50310834-50310657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
88, 50
               

               
Conread position:
               
78-263
               

               
Cow position:
               
chr9:46664751-46664944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
14, 129
               

               
Conread position:
               
78-269
               

               
Cow position:
               
chr9:29339387-29339197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
117, 65
               

               
Conread position:
               
78-278
               

               
Cow position:
               
chr9:6596304-6596098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
96, 42
               

               
Conread position:
               
78-278
               

               
Cow position:
               
chr9:40005400-40005612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 192
               

               
Conread position:
               
78-278
               

               
Cow position:
               
chr9:59849545-59849356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
78-284
               

               
Cow position:
               
chr9:1878076-1877863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 85
               

               
Conread position:
               
78-287
               

               
Cow position:
               
chr9:35105864-35105645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
75, 191
               

               
Conread position:
               
78-289
               

               
Cow position:
               
chr9:52839954-52839739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
78-305
               

               
Cow position:
               
chr9:63896467-63896700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 66
               

               
Conread position:
               
78-310
               

               
Cow position:
               
chr9:11168656-11168899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 190
               

               
Conread position:
               
78-316
               

               
Cow position:
               
chr9:47446089-47445849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
117, 18
               

               
Conread position:
               
78-325
               

               
Cow position:
               
chr9:3774091-3774350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
72, 55
               

               
Conread position:
               
78-325
               

               
Cow position:
               
chr9:56065490-56065735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
88, 39
               

               
Conread position:
               
78-333
               

               
Cow position:
               
chr9:35028239-35027973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
59, 178
               

               
Conread position:
               
78-351
               

               
Cow position:
               
chr9:62668176-62668464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
75, 17
               

               
Conread position:
               
78-355
               

               
Cow position:
               
chr9:9815339-9815630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
75, 162
               

               
Conread position:
               
78-357
               

               
Cow position:
               
chr9:43443730-43444009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
33, 184
               

               
Conread position:
               
78-378
               

               
Cow position:
               
chr9:15225370-15225055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 188
               

               
Conread position:
               
78-383
               

               
Cow position:
               
chr9:6839919-6840251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 199
               

               
Conread position:
               
78-385
               

               
Cow position:
               
chr9:1729748-1729434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
67, 189
               

               
Conread position:
               
78-405
               

               
Cow position:
               
chr9:38846407-38846087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 121
               

               
Conread position:
               
78-406
               

               
Cow position:
               
chr9:7362954-7363290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
78-408
               

               
Cow position:
               
chr9:16300643-16300306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 183
               

               
Conread position:
               
78-410
               

               
Cow position:
               
chr9:56011425-56011766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
72, 174
               

               
Conread position:
               
78-412
               

               
Cow position:
               
chr9:64050635-64050286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 119
               

               
Conread position:
               
78-418
               

               
Cow position:
               
chr9:34902175-34901842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 183
               

               
Conread position:
               
78-419
               

               
Cow position:
               
chr9:64559956-64559610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 190
               

               
Conread position:
               
78-420
               

               
Cow position:
               
chr9:14796844-14796502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
69, 129
               

               
Conread position:
               
78-420
               

               
Cow position:
               
chr9:38961502-38961160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 11
               

               
Conread position:
               
78-420
               

               
Cow position:
               
chr9:54677190-54677499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
88, 74
               

               
Conread position:
               
78-421
               

               
Cow position:
               
chr9:35167102-35167447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 153
               

               
Conread position:
               
78-422
               

               
Cow position:
               
chr9:7409689-7410061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 205
               

               
Conread position:
               
78-422
               

               
Cow position:
               
chr9:39681265-39681637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
69, 191
               

               
Conread position:
               
78-422
               

               
Cow position:
               
chr9:54528440-54528794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 185
               

               
Conread position:
               
78-423
               

               
Cow position:
               
chr9:28354443-28354813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 180
               

               
Conread position:
               
78-423
               

               
Cow position:
               
chr9:40542062-40542394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
78-423
               

               
Cow position:
               
chr9:55084375-55084017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 47
               

               
Conread position:
               
78-423
               

               
Cow position:
               
chr9:55287963-55287611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 171
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:1751263-1751616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 126
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:5245779-5246129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 193
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:9443675-9443317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 194
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:9461728-9461374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 26
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:9723950-9723602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 183
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:10309070-10308726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 54
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:13670559-13670918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 162
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:15215761-15215400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 192
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:17310635-17310281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 11
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:19714006-19714351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 133
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:20942689-20942331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:21888096-21888450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 187
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:22152159-22151807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 195
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:22434002-22433661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
75, 99
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:22443701-22443331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 190
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:30402500-30402139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 127
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:36445546-36445902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 201
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:41282941-41283309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 189
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:50081114-50080765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 134
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:53413312-53412968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
76, 87
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:56032389-56032048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 161
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:58134077-58133743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 62
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:62442216-62442562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
63, 53
               

               
Conread position:
               
78-424
               

               
Cow position:
               
chr9:63745741-63746085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 186
               

               
Conread position:
               
78-425
               

               
Cow position:
               
chr9:6934147-6933790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 192
               

               
Conread position:
               
78-426
               

               
Cow position:
               
chr9:10010741-10011083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
70, 25
               

               
Conread position:
               
78-426
               

               
Cow position:
               
chr9:32307305-32306957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 183
               

               
Conread position:
               
78-426
               

               
Cow position:
               
chr9:43870901-43871255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 193
               

               
Conread position:
               
79-333
               

               
Cow position:
               
chr9:49416914-49417182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
58, 186
               

               
Conread position:
               
79-381
               

               
Cow position:
               
chr9:11319707-11319394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 158
               

               
Conread position:
               
79-411
               

               
Cow position:
               
chr9:54716675-54716354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
94, 62
               

               
Conread position:
               
79-422
               

               
Cow position:
               
chr9:15805996-15805642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 12
               

               
Conread position:
               
79-422
               

               
Cow position:
               
chr9:29185210-29184855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 194
               

               
Conread position:
               
79-424
               

               
Cow position:
               
chr9:32371824-32371479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 48
               

               
Conread position:
               
79-426
               

               
Cow position:
               
chr9:3220063-3220402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
74, 190
               

               
Conread position:
               
80-232
               

               
Cow position:
               
chr9:21384019-21383861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
68, 12
               

               
Conread position:
               
80-285
               

               
Cow position:
               
chr9:52513520-52513309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
72, 123
               

               
Conread position:
               
80-309
               

               
Cow position:
               
chr9:12910473-12910234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
73, 188
               

               
Conread position:
               
80-316
               

               
Cow position:
               
chr9:40215175-40215421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 183
               

               
Conread position:
               
80-365
               

               
Cow position:
               
chr9:42062027-42062338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
72, 159
               

               
Conread position:
               
80-385
               

               
Cow position:
               
chr9:64105827-64106148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 279
               

               
Conread position:
               
80-389
               

               
Cow position:
               
chr9:18217170-18216854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 7
               

               
Conread position:
               
80-399
               

               
Cow position:
               
chr9:25921751-25922079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
60, 192
               

               
Conread position:
               
80-404
               

               
Cow position:
               
chr9:17411265-17410924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
68, 190
               

               
Conread position:
               
80-416
               

               
Cow position:
               
chr9:31079152-31078812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 54
               

               
Conread position:
               
80-418
               

               
Cow position:
               
chr9:60110178-60110508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
67, 131
               

               
Conread position:
               
80-422
               

               
Cow position:
               
chr9:8337955-8338309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 183
               

               
Conread position:
               
80-424
               

               
Cow position:
               
chr9:3070481-3070142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
80-424
               

               
Cow position:
               
chr9:8723722-8724080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 169
               

               
Conread position:
               
80-424
               

               
Cow position:
               
chr9:20319127-20318796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
201, 75
               

               
Conread position:
               
80-424
               

               
Cow position:
               
chr9:24872764-24873130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
57, 147
               

               
Conread position:
               
80-424
               

               
Cow position:
               
chr9:29006485-29006841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 193
               

               
Conread position:
               
80-424
               

               
Cow position:
               
chr9:33092887-33093225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
58, 161
               

               
Conread position:
               
80-424
               

               
Cow position:
               
chr9:33219021-33218671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 100
               

               
Conread position:
               
80-424
               

               
Cow position:
               
chr9:45756292-45756638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 10
               

               
Conread position:
               
80-424
               

               
Cow position:
               
chr9:47906351-47906009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
55, 18
               

               
Conread position:
               
80-424
               

               
Cow position:
               
chr9:50977324-50976965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
60, 9
               

               
Conread position:
               
80-424
               

               
Cow position:
               
chr9:61022551-61022891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
106, 72
               

               
Conread position:
               
80-426
               

               
Cow position:
               
chr9:44915169-44914813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 112
               

               
Conread position:
               
80-426
               

               
Cow position:
               
chr9:52000947-52001289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
81-227
               

               
Cow position:
               
chr9:3343677-3343835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
81-288
               

               
Cow position:
               
chr9:34283882-34284094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
69, 149
               

               
Conread position:
               
81-300
               

               
Cow position:
               
chr9:27345655-27345452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
71, 83
               

               
Conread position:
               
81-344
               

               
Cow position:
               
chr9:50543499-50543215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
47, 193
               

               
Conread position:
               
81-370
               

               
Cow position:
               
chr9:30477845-30477557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 15
               

               
Conread position:
               
81-408
               

               
Cow position:
               
chr9:55889743-55890075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
69, 180
               

               
Conread position:
               
81-424
               

               
Cow position:
               
chr9:1520811-1520448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 190
               

               
Conread position:
               
81-424
               

               
Cow position:
               
chr9:36410418-36410071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
59, 9
               

               
Conread position:
               
81-426
               

               
Cow position:
               
chr9:33940534-33940890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 189
               

               
Conread position:
               
82-305
               

               
Cow position:
               
chr9:19034287-19034504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
202, 65
               

               
Conread position:
               
82-403
               

               
Cow position:
               
chr9:39577669-39577994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 38
               

               
Conread position:
               
82-408
               

               
Cow position:
               
chr9:2114076-2113738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 8
               

               
Conread position:
               
82-424
               

               
Cow position:
               
chr9:9552020-9552368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 189
               

               
Conread position:
               
82-424
               

               
Cow position:
               
chr9:29684074-29684426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 190
               

               
Conread position:
               
83-248
               

               
Cow position:
               
chr9:40776729-40776905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
84-278
               

               
Cow position:
               
chr9:54178488-54178296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
121, 78
               

               
Conread position:
               
85-423
               

               
Cow position:
               
chr9:58204606-58204943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 86
               

               
Conread position:
               
86-424
               

               
Cow position:
               
chr9:52578603-52578252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
87-384
               

               
Cow position:
               
chr9:49709782-49710085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 119
               

               
Conread position:
               
87-412
               

               
Cow position:
               
chr9:1949852-1950188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 184
               

               
Conread position:
               
87-422
               

               
Cow position:
               
chr9:9956759-9957099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
80, 37
               

               
Conread position:
               
88-293
               

               
Cow position:
               
chr9:43936881-43937091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
65, 115
               

               
Conread position:
               
88-422
               

               
Cow position:
               
chr9:9416460-9416128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 147
               

               
Conread position:
               
89-403
               

               
Cow position:
               
chr9:4646388-4646068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 119
               

               
Conread position:
               
89-412
               

               
Cow position:
               
chr9:8534753-8534413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 165
               

               
Conread position:
               
92-424
               

               
Cow position:
               
chr9:37528412-37528737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
218, 70
               

               
Conread position:
               
93-375
               

               
Cow position:
               
chr9:11313569-11313275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 174
               

               
Conread position:
               
94-277
               

               
Cow position:
               
chr9:53326809-53326615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
57, 178
               

               
Conread position:
               
94-422
               

               
Cow position:
               
chr9:44108891-44108551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
58, 26
               

               
Conread position:
               
94-423
               

               
Cow position:
               
chr9:17928699-17929053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 177
               

               
Conread position:
               
94-426
               

               
Cow position:
               
chr9:8998291-8998638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 182
               

               
Conread position:
               
96-424
               

               
Cow position:
               
chr9:6089033-6089378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 24
               

               
Conread position:
               
98-408
               

               
Cow position:
               
chr9:23541445-23541153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
99-308
               

               
Cow position:
               
chr9:1756198-1755975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
55, 130
               

               
Conread position:
               
99-318
               

               
Cow position:
               
chr9:36857532-36857753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
55, 66
               

               
Conread position:
               
99-335
               

               
Cow position:
               
chr9:40543368-40543125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
89, 41
               

               
Conread position:
               
99-363
               

               
Cow position:
               
chr9:44834016-44833745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 121
               

               
Conread position:
               
99-373
               

               
Cow position:
               
chr9:6338740-6339032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 174
               

               
Conread position:
               
99-375
               

               
Cow position:
               
chr9:43623215-43623492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
54, 71
               

               
Conread position:
               
99-385
               

               
Cow position:
               
chr9:32815599-32815880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
55, 66
               

               
Conread position:
               
99-398
               

               
Cow position:
               
chr9:34911100-34911415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 179
               

               
Conread position:
               
99-422
               

               
Cow position:
               
chr9:8997507-8997835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
41, 74
               

               
Conread position:
               
99-422
               

               
Cow position:
               
chr9:21030255-21030595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 170
               

               
Conread position:
               
99-424
               

               
Cow position:
               
chr9:647724-648056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
49, 75
               

               
Conread position:
               
99-424
               

               
Cow position:
               
chr9:788766-789074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
54, 65
               

               
Conread position:
               
99-424
               

               
Cow position:
               
chr9:19539048-19539378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 21
               

               
Conread position:
               
99-424
               

               
Cow position:
               
chr9:25964886-25964543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
39, 172
               

               
Conread position:
               
99-424
               

               
Cow position:
               
chr9:49983142-49982816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 65
               

               
Conread position:
               
99-424
               

               
Cow position:
               
chr9:52505359-52505022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 125
               

               
Conread position:
               
99-424
               

               
Cow position:
               
chr9:52689664-52689343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
52, 73
               

               
Conread position:
               
99-426
               

               
Cow position:
               
chr9:7866021-7866348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
54, 65
               

               
Conread position:
               
100-424
               

               
Cow position:
               
chr9:17634875-17634550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
53, 90
               

               
Conread position:
               
101-370
               

               
Cow position:
               
chr9:53211542-53211270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
50, 153
               

               
Conread position:
               
104-410
               

               
Cow position:
               
chr9:43207422-43207112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
41, 117
               

               
Conread position:
               
105-424
               

               
Cow position:
               
chr9:48107163-48106838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
35, 152
               

               
Conread position:
               
106-408
               

               
Cow position:
               
chr9:5162096-5161801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
47, 101
               

               
Conread position:
               
106-423
               

               
Cow position:
               
chr9:22114681-22114353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 81
               

               
Conread position:
               
106-424
               

               
Cow position:
               
chr9:35904791-35904470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 162
               

               
Conread position:
               
107-275
               

               
Cow position:
               
chr9:8306809-8306985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
46, 161
               

               
Conread position:
               
107-424
               

               
Cow position:
               
chr9:8937107-8937429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
33, 101
               

               
Conread position:
               
110-424
               

               
Cow position:
               
chr9:49764619-49764937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 154
               

               
Conread position:
               
111-424
               

               
Cow position:
               
chr9:26435100-26434783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
24, 153
               

               
Conread position:
               
112-310
               

               
Cow position:
               
chr9:50202533-50202738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
28, 122
               

               
Conread position:
               
112-369
               

               
Cow position:
               
chr9:8317488-8317236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 98
               

               
Conread position:
               
113-424
               

               
Cow position:
               
chr9:26390739-26391045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
115-424
               

               
Cow position:
               
chr9:35849867-35850179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 128
               

               
Conread position:
               
117-424
               

               
Cow position:
               
chr9:52787574-52787255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
21, 213
               

               
Conread position:
               
117-424
               

               
Cow position:
               
chr9:54924583-54924907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
36, 156
               

               
Conread position:
               
118-424
               

               
Cow position:
               
chr9:51311639-51311951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 261
               

               
Conread position:
               
120-385
               

               
Cow position:
               
chr9:62134656-62134378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
54, 114
               

               
Conread position:
               
120-421
               

               
Cow position:
               
chr9:47875992-47875670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
21, 177
               

               
Conread position:
               
122-426
               

               
Cow position:
               
chr9:38343860-38344178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 147
               

               
Conread position:
               
124-424
               

               
Cow position:
               
chr9:6225482-6225166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 145
               

               
Conread position:
               
125-424
               

               
Cow position:
               
chr9:35533980-35533671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 144
               

               
Conread position:
               
129-369
               

               
Cow position:
               
chr9:3371544-3371805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 141
               

               
Conread position:
               
131-424
               

               
Cow position:
               
chr9:5399719-5399996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
154, 49
               

               
Conread position:
               
132-413
               

               
Cow position:
               
chr9:34919276-34918996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
42, 130
               

               
Conread position:
               
140-407
               

               
Cow position:
               
chr9:29108528-29108801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
26, 188
               

               
Conread position:
               
140-424
               

               
Cow position:
               
chr9:1952274-1951989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
141-374
               

               
Cow position:
               
chr9:33038472-33038227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
12, 125
               

               
Conread position:
               
146-385
               

               
Cow position:
               
chr9:29091792-29092046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
15, 119
               

               
Conread position:
               
149-346
               

               
Cow position:
               
chr9:2135602-2135397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
33, 115
               

               
Conread position:
               
149-424
               

               
Cow position:
               
chr9:5531950-5532233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 114
               

               
Conread position:
               
151-374
               

               
Cow position:
               
chr9:32710932-32711163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 111
               

               
Conread position:
               
151-418
               

               
Cow position:
               
chr9:40105472-40105751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
10, 110
               

               
Conread position:
               
151-419
               

               
Cow position:
               
chr9:48118685-48118427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
151-424
               

               
Cow position:
               
chr9:31626152-31626430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 100
               

               
Conread position:
               
154-324
               

               
Cow position:
               
chr9:31638633-31638455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
41, 107
               

               
Conread position:
               
155-424
               

               
Cow position:
               
chr9:36623426-36623171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
126, 8
               

               
Conread position:
               
161-333
               

               
Cow position:
               
chr9:49279481-49279669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 112
               

               
Conread position:
               
165-325
               

               
Cow position:
               
chr9:34106744-34106909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
165-333
               

               
Cow position:
               
chr9:14358184-14358357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
41, 94
               

               
Conread position:
               
165-372
               

               
Cow position:
               
chr9:50667442-50667653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
40, 98
               

               
Conread position:
               
165-422
               

               
Cow position:
               
chr9:10092373-10092115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
165-424
               

               
Cow position:
               
chr9:12183768-12184027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
38, 62
               

               
Conread position:
               
165-424
               

               
Cow position:
               
chr9:34000599-34000332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 71
               

               
Conread position:
               
165-424
               

               
Cow position:
               
chr9:37000040-36999780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 77
               

               
Conread position:
               
166-422
               

               
Cow position:
               
chr9:32812371-32812625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 37
               

               
Conread position:
               
169-342
               

               
Cow position:
               
chr9:1879405-1879580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
169-424
               

               
Cow position:
               
chr9:35306093-35305839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 94
               

               
Conread position:
               
170-327
               

               
Cow position:
               
chr9:62151133-62151290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
142, 83
               

               
Conread position:
               
171-391
               

               
Cow position:
               
chr9:51004921-51005135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
172-305
               

               
Cow position:
               
chr9:31270808-31270943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 88
               

               
Conread position:
               
172-310
               

               
Cow position:
               
chr9:4324129-4323989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
31, 88
               

               
Conread position:
               
172-350
               

               
Cow position:
               
chr9:40612411-40612590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
172-354
               

               
Cow position:
               
chr9:1909353-1909175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
30, 80
               

               
Conread position:
               
172-423
               

               
Cow position:
               
chr9:27077214-27076971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 49
               

               
Conread position:
               
172-424
               

               
Cow position:
               
chr9:23027832-23028073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
23, 80
               

               
Conread position:
               
172-424
               

               
Cow position:
               
chr9:30138162-30138406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 51
               

               
Conread position:
               
172-424
               

               
Cow position:
               
chr9:64517071-64516816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 85
               

               
Conread position:
               
172-426
               

               
Cow position:
               
chr9:22228052-22227802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 86
               

               
Conread position:
               
173-369
               

               
Cow position:
               
chr9:58734397-58734601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
29, 88
               

               
Conread position:
               
173-385
               

               
Cow position:
               
chr9:40603974-40604192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
22, 86
               

               
Conread position:
               
180-406
               

               
Cow position:
               
chr9:16182451-16182227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
180-424
               

               
Cow position:
               
chr9:53608353-53608113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
130, 25
               

               
Conread position:
               
182-359
               

               
Cow position:
               
chr9:29578284-29578460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
23, 78
               

               
Conread position:
               
182-424
               

               
Cow position:
               
chr9:49403797-49404035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 77
               

               
Conread position:
               
183-424
               

               
Cow position:
               
chr9:30664741-30664498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 12
               

               
Conread position:
               
183-424
               

               
Cow position:
               
chr9:59172343-59172097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
184-426
               

               
Cow position:
               
chr9:39971086-39971316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
19, 74
               

               
Conread position:
               
189-424
               

               
Cow position:
               
chr9:25958468-25958694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
14, 62
               

               
Conread position:
               
190-420
               

               
Cow position:
               
chr9:4128735-4128506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
191-426
               

               
Cow position:
               
chr9:36066958-36067188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
193-424
               

               
Cow position:
               
chr9:31640271-31640037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
194-318
               

               
Cow position:
               
chr9:28452105-28451981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
15, 65
               

               
Conread position:
               
194-413
               

               
Cow position:
               
chr9:41652839-41653059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
8, 23
               

               
Conread position:
               
194-419
               

               
Cow position:
               
chr9:42998414-42998195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 66
               

               
Conread position:
               
194-422
               

               
Cow position:
               
chr9:41416405-41416629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
92, 63
               

               
Conread position:
               
194-424
               

               
Cow position:
               
chr9:45171112-45170888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
141, 12
               

               
Conread position:
               
196-306
               

               
Cow position:
               
chr9:18029341-18029229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 66
               

               
Conread position:
               
196-423
               

               
Cow position:
               
chr9:18002896-18002669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 61
               

               
Conread position:
               
196-424
               

               
Cow position:
               
chr9:5621980-5621749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
7, 144
               

               
Conread position:
               
196-424
               

               
Cow position:
               
chr9:8600384-8600617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
59, 150
               

               
Conread position:
               
196-424
               

               
Cow position:
               
chr9:18163100-18162874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 45
               

               
Conread position:
               
196-424
               

               
Cow position:
               
chr9:27052282-27052052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
81, 88
               

               
Conread position:
               
197-379
               

               
Cow position:
               
chr9:59507150-59507317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
197-424
               

               
Cow position:
               
chr9:22361075-22361295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
113, 9
               

               
Conread position:
               
197-424
               

               
Cow position:
               
chr9:50295970-50295743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
113, 142
               

               
Conread position:
               
198-424
               

               
Cow position:
               
chr9:20738760-20738983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 17
               

               
Conread position:
               
198-424
               

               
Cow position:
               
chr9:60037711-60037936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
111, 58
               

               
Conread position:
               
199-354
               

               
Cow position:
               
chr9:52638103-52637945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
13, 61
               

               
Conread position:
               
199-369
               

               
Cow position:
               
chr9:41469806-41469632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
200-365
               

               
Cow position:
               
chr9:43048568-43048404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
87, 16
               

               
Conread position:
               
200-424
               

               
Cow position:
               
chr9:1997202-1997413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
200-424
               

               
Cow position:
               
chr9:48343661-48343882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
201-423
               

               
Cow position:
               
chr9:34093374-34093146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
60, 144
               

               
Conread position:
               
201-424
               

               
Cow position:
               
chr9:29825097-29825310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
109, 54
               

               
Conread position:
               
201-424
               

               
Cow position:
               
chr9:58439719-58439501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
100, 37
               

               
Conread position:
               
202-397
               

               
Cow position:
               
chr9:33681745-33681938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
69, 55
               

               
Conread position:
               
202-424
               

               
Cow position:
               
chr9:16218585-16218362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
71, 44
               

               
Conread position:
               
204-422
               

               
Cow position:
               
chr9:30749523-30749306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
74, 51
               

               
Conread position:
               
205-357
               

               
Cow position:
               
chr9:51011481-51011326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
76, 51
               

               
Conread position:
               
205-408
               

               
Cow position:
               
chr9:8612346-8612552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
53, 139
               

               
Conread position:
               
208-403
               

               
Cow position:
               
chr9:38875509-38875314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
81, 48
               

               
Conread position:
               
212-408
               

               
Cow position:
               
chr9:8740587-8740785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
166, 125
               

               
Conread position:
               
215-373
               

               
Cow position:
               
chr9:31090523-31090682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
66, 44
               

               
Conread position:
               
216-407
               

               
Cow position:
               
chr9:8562913-8563105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
94, 41
               

               
Conread position:
               
216-423
               

               
Cow position:
               
chr9:3594455-3594245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
57, 68
               

               
Conread position:
               
216-424
               

               
Cow position:
               
chr9:3807665-3807456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 34
               

               
Conread position:
               
216-424
               

               
Cow position:
               
chr9:5141155-5141355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
102, 93
               

               
Conread position:
               
221-330
               

               
Cow position:
               
chr9:52257865-52257971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
221-424
               

               
Cow position:
               
chr9:10877791-10877585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
221-424
               

               
Cow position:
               
chr9:17785381-17785180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
224-410
               

               
Cow position:
               
chr9:37141315-37141494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
66, 26
               

               
Conread position:
               
225-424
               

               
Cow position:
               
chr9:26310635-26310839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
29, 118
               

               
Conread position:
               
232-424
               

               
Cow position:
               
chr9:38385783-38385588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
66, 111
               

               
Conread position:
               
235-423
               

               
Cow position:
               
chr9:1350352-1350166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
80, 24
               

               
Conread position:
               
260-424
               

               
Cow position:
               
chr9:13802022-13802174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
30, 43
               
Show alignments to all cow chromosomes.