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Cow genome map

           
Conread name:
           
Lym1-jns73_D06.f
        

               
Conread position:
               
1-117
               

               
Cow position:
               
chr1:36306886-36306770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-122
               

               
Cow position:
               
chr1:4303231-4303351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
1-122
               

               
Cow position:
               
chr1:31846206-31846085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-122
               

               
Cow position:
               
chr1:60403977-60403856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-126
               

               
Cow position:
               
chr1:36237988-36237863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-136
               

               
Cow position:
               
chr1:83246636-83246499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr1:69411486-69411649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
7, 49
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr1:26984220-26984056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
102, 90
               

               
Conread position:
               
1-168
               

               
Cow position:
               
chr1:77685770-77685942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr1:41953791-41953965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1-183
               

               
Cow position:
               
chr1:53441907-53442088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr1:68710492-68710286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 176
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr1:85622740-85622538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr1:92792260-92792051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
79, 34
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr1:20871348-20871577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr1:14006333-14006097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
23, 28
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr1:57088059-57087823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr1:53394283-53394024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
69, 239
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr1:71789940-71790193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
137, 59
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr1:74751420-74751682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
86, 106
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr1:79719016-79718743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr1:52139420-52139700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
127, 48
               

               
Conread position:
               
1-276
               

               
Cow position:
               
chr1:36688172-36688451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
127, 37
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr1:61846366-61846067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
47, 236
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr1:73457886-73458173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
83, 190
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr1:75250320-75250022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
124, 48
               

               
Conread position:
               
1-305
               

               
Cow position:
               
chr1:102305939-102306243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
127, 95
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr1:71350516-71350825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
123, 241
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr1:635476-635795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
127, 89
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr1:10716713-10716391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
70, 169
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr1:42482408-42482087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr1:71665726-71666066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
137, 118
               

               
Conread position:
               
1-333
               

               
Cow position:
               
chr1:4701463-4701798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
127, 36
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr1:42868742-42869063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
127, 34
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr1:5010625-5010972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
127, 191
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr1:35600082-35600429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
127, 345
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr1:21561228-21560882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
98, 178
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr1:53369406-53369055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
5, 35
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr1:70094546-70094189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
133, 122
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr1:81515447-81515091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
90, 240
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr1:97820892-97820537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
33, 166
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr1:101714324-101713969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
130, 92
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr1:4691796-4691439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
127, 90
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr1:5479450-5479842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
127, 94
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr1:5858464-5858842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr1:6102692-6103068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr1:11853478-11853841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 38
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr1:70344253-70343886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
95, 37
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr1:73545700-73546058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
127, 215
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr1:74929500-74929869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
127, 181
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr1:101916378-101916015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
45, 70
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr1:55230181-55229820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
131, 76
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr1:35162613-35162242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
128, 51
               

               
Conread position:
               
1-384
               

               
Cow position:
               
chr1:53374635-53374255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 35
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr1:51446090-51445695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
127, 41
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr1:102105945-102105549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
128, 265
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr1:1878231-1877841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr1:41056888-41056497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
9, 23
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr1:62964477-62964093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
5, 97
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr1:102266062-102266453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
126, 71
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr1:4402351-4401959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
131, 18
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr1:5423525-5423923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
116, 177
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr1:12464457-12464852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
40, 86
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr1:41182044-41181656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
269, 90
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr1:45019598-45019992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
117, 72
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr1:64803889-64804296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 269
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr1:66138530-66138128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
62, 180
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr1:68817592-68817987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 29
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr1:42887072-42887452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
127, 85
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr1:47658556-47658164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
127, 235
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr1:63434590-63434999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 236
               

               
Conread position:
               
1-395
               

               
Cow position:
               
chr1:49317293-49317685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 119
               

               
Conread position:
               
2-360
               

               
Cow position:
               
chr1:53370291-53369926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 36
               

               
Conread position:
               
2-363
               

               
Cow position:
               
chr1:23488296-23488664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
128, 230
               

               
Conread position:
               
2-389
               

               
Cow position:
               
chr1:50930772-50931154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
8, 72
               

               
Conread position:
               
3-346
               

               
Cow position:
               
chr1:39224733-39225063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
238, 85
               

               
Conread position:
               
3-355
               

               
Cow position:
               
chr1:61564987-61564649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
231, 69
               

               
Conread position:
               
3-390
               

               
Cow position:
               
chr1:24542364-24542768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 34
               

               
Conread position:
               
3-392
               

               
Cow position:
               
chr1:43505730-43505335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
125, 69
               

               
Conread position:
               
3-392
               

               
Cow position:
               
chr1:93499825-93499434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
125, 74
               

               
Conread position:
               
3-393
               

               
Cow position:
               
chr1:54258775-54258378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 283
               

               
Conread position:
               
4-122
               

               
Cow position:
               
chr1:14067238-14067354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
4-122
               

               
Cow position:
               
chr1:73397866-73397984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-122
               

               
Cow position:
               
chr1:90192625-90192506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
4-158
               

               
Cow position:
               
chr1:63994350-63994506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
124, 89
               

               
Conread position:
               
4-160
               

               
Cow position:
               
chr1:99637046-99637207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
4-165
               

               
Cow position:
               
chr1:7966052-7965888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
123, 66
               

               
Conread position:
               
4-166
               

               
Cow position:
               
chr1:71664689-71664856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
4-167
               

               
Cow position:
               
chr1:709698-709860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
4-167
               

               
Cow position:
               
chr1:39683936-39684104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
4-167
               

               
Cow position:
               
chr1:54569906-54569738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
4-192
               

               
Cow position:
               
chr1:84595096-84594903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
4-195
               

               
Cow position:
               
chr1:19599155-19599349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 72
               

               
Conread position:
               
4-196
               

               
Cow position:
               
chr1:93590385-93590575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
124, 31
               

               
Conread position:
               
4-199
               

               
Cow position:
               
chr1:87149611-87149807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
120, 65
               

               
Conread position:
               
4-199
               

               
Cow position:
               
chr1:100823245-100823046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 168
               

               
Conread position:
               
4-202
               

               
Cow position:
               
chr1:81364468-81364265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
4-208
               

               
Cow position:
               
chr1:9637235-9637028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
120, 91
               

               
Conread position:
               
4-208
               

               
Cow position:
               
chr1:95153079-95152870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
4-209
               

               
Cow position:
               
chr1:76518629-76518420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
120, 11
               

               
Conread position:
               
4-221
               

               
Cow position:
               
chr1:45315426-45315650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
4-228
               

               
Cow position:
               
chr1:38706648-38706875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
121, 35
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr1:55753014-55753240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
123, 81
               

               
Conread position:
               
4-234
               

               
Cow position:
               
chr1:852378-852143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
4-235
               

               
Cow position:
               
chr1:6731384-6731152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
123, 68
               

               
Conread position:
               
4-244
               

               
Cow position:
               
chr1:72422201-72422446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
124, 146
               

               
Conread position:
               
4-245
               

               
Cow position:
               
chr1:8287425-8287670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
120, 68
               

               
Conread position:
               
4-248
               

               
Cow position:
               
chr1:17056195-17055953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
124, 68
               

               
Conread position:
               
4-248
               

               
Cow position:
               
chr1:102768380-102768142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 31
               

               
Conread position:
               
4-252
               

               
Cow position:
               
chr1:102529648-102529901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
96, 160
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr1:73020457-73020709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
120, 31
               

               
Conread position:
               
4-262
               

               
Cow position:
               
chr1:50432276-50432542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
90, 103
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr1:54267733-54267991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 91
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr1:88360090-88359823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
73, 232
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr1:97303048-97303302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
155, 94
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr1:51609583-51609309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
123, 36
               

               
Conread position:
               
4-275
               

               
Cow position:
               
chr1:96019433-96019165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
114, 31
               

               
Conread position:
               
4-277
               

               
Cow position:
               
chr1:5776352-5776070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
17, 251
               

               
Conread position:
               
4-279
               

               
Cow position:
               
chr1:6394762-6394488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
124, 82
               

               
Conread position:
               
4-279
               

               
Cow position:
               
chr1:38419232-38418956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr1:81477658-81477948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr1:102754055-102753776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr1:47790463-47790744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
114, 69
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr1:90904552-90904840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
124, 76
               

               
Conread position:
               
4-294
               

               
Cow position:
               
chr1:65103834-65103532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
73, 187
               

               
Conread position:
               
4-299
               

               
Cow position:
               
chr1:4444634-4444916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
124, 219
               

               
Conread position:
               
4-299
               

               
Cow position:
               
chr1:46031166-46030867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
113, 34
               

               
Conread position:
               
4-304
               

               
Cow position:
               
chr1:82513147-82513453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
67, 49
               

               
Conread position:
               
4-309
               

               
Cow position:
               
chr1:49824860-49825171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
128, 94
               

               
Conread position:
               
4-309
               

               
Cow position:
               
chr1:86061772-86062088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
37, 134
               

               
Conread position:
               
4-311
               

               
Cow position:
               
chr1:88397637-88397944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
128, 195
               

               
Conread position:
               
4-313
               

               
Cow position:
               
chr1:3605684-3605984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
124, 32
               

               
Conread position:
               
4-314
               

               
Cow position:
               
chr1:4391063-4391390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
4-314
               

               
Cow position:
               
chr1:22824114-22823799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 169
               

               
Conread position:
               
4-316
               

               
Cow position:
               
chr1:8374248-8374561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 64
               

               
Conread position:
               
4-318
               

               
Cow position:
               
chr1:56225987-56225682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
124, 62
               

               
Conread position:
               
4-318
               

               
Cow position:
               
chr1:56618451-56618762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
124, 76
               

               
Conread position:
               
4-319
               

               
Cow position:
               
chr1:5876258-5876572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
128, 183
               

               
Conread position:
               
4-319
               

               
Cow position:
               
chr1:10617096-10616768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
108, 153
               

               
Conread position:
               
4-319
               

               
Cow position:
               
chr1:31794803-31795115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
124, 15
               

               
Conread position:
               
4-321
               

               
Cow position:
               
chr1:628173-627848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
124, 91
               

               
Conread position:
               
4-321
               

               
Cow position:
               
chr1:78794031-78794339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
124, 68
               

               
Conread position:
               
4-324
               

               
Cow position:
               
chr1:66898289-66898614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
115, 248
               

               
Conread position:
               
4-327
               

               
Cow position:
               
chr1:84103853-84104173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
120, 177
               

               
Conread position:
               
4-329
               

               
Cow position:
               
chr1:20104471-20104147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
122, 86
               

               
Conread position:
               
4-332
               

               
Cow position:
               
chr1:38277821-38278162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
124, 105
               

               
Conread position:
               
4-335
               

               
Cow position:
               
chr1:72105605-72105286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
124, 32
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr1:11172573-11172246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
134, 68
               

               
Conread position:
               
4-339
               

               
Cow position:
               
chr1:26934063-26934392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
88, 205
               

               
Conread position:
               
4-341
               

               
Cow position:
               
chr1:78838992-78838665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
103, 69
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr1:648533-648188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
128, 246
               

               
Conread position:
               
4-344
               

               
Cow position:
               
chr1:25387253-25386914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
101, 48
               

               
Conread position:
               
4-344
               

               
Cow position:
               
chr1:101982945-101983289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
128, 63
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr1:4243125-4243480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr1:29481422-29481764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
127, 219
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr1:64572719-64572376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 84
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr1:72068629-72068977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 16
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr1:92996681-92997037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
80, 94
               

               
Conread position:
               
4-353
               

               
Cow position:
               
chr1:21955167-21955518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
114, 102
               

               
Conread position:
               
4-353
               

               
Cow position:
               
chr1:29452128-29451773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
115, 257
               

               
Conread position:
               
4-353
               

               
Cow position:
               
chr1:63139049-63138693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
121, 244
               

               
Conread position:
               
4-353
               

               
Cow position:
               
chr1:79591309-79590959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
67, 221
               

               
Conread position:
               
4-355
               

               
Cow position:
               
chr1:29626706-29627058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
114, 13
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr1:91023263-91023616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
124, 34
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr1:23186597-23186948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
120, 68
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr1:35555120-35554753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
126, 31
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr1:55428748-55429107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 272
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr1:84283276-84282923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr1:96038593-96038947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
123, 89
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr1:7748421-7748065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
84, 34
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr1:7752585-7752231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
124, 34
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr1:11226024-11226394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
68, 245
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr1:16961789-16962162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
97, 247
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr1:25735073-25734706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
97, 41
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr1:33720309-33719965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 120
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr1:71119726-71119360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
115, 77
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr1:72034723-72035078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 34
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr1:78811243-78810887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
124, 86
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr1:81290709-81290362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
124, 58
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr1:86110540-86110883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
152, 32
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr1:86682363-86682715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
137, 11
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr1:101634904-101634552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
92, 105
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr1:102756231-102756580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
124, 12
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr1:61012511-61012160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
94, 75
               

               
Conread position:
               
4-362
               

               
Cow position:
               
chr1:64302045-64302401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
83, 35
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:196801-197159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
124, 95
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:874868-874491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:3324079-3323706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
94, 110
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:5597007-5597353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
124, 68
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:10655682-10655326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
263, 71
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:11771878-11772232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
121, 212
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:12222399-12222760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 170
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:33206669-33207026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 105
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:37321805-37322157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
37, 83
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:41697259-41696903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:43357797-43358170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
31, 180
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:46693445-46693808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
12, 246
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:52435480-52435115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
113, 168
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:55705042-55705405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
128, 45
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:57880576-57880944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
121, 232
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:61005352-61005717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
16, 156
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:61885117-61884764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 68
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:63595846-63596211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
110, 269
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:70422507-70422149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
117, 30
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:70435191-70434848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
226, 96
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:76037307-76037657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
85, 234
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:77620754-77620396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
114, 295
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:79164877-79165241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 127
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:89388548-89388180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
124, 94
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:92370163-92370513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
128, 71
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:95177123-95176784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
219, 65
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr1:96304769-96305131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
120, 16
               

               
Conread position:
               
4-364
               

               
Cow position:
               
chr1:7443187-7442832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 217
               

               
Conread position:
               
4-365
               

               
Cow position:
               
chr1:484258-484623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 232
               

               
Conread position:
               
4-368
               

               
Cow position:
               
chr1:59519116-59518760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
152, 69
               

               
Conread position:
               
4-371
               

               
Cow position:
               
chr1:96365854-96365505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
124, 34
               

               
Conread position:
               
4-372
               

               
Cow position:
               
chr1:10518824-10519207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
73, 105
               

               
Conread position:
               
4-373
               

               
Cow position:
               
chr1:3923599-3923959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
124, 68
               

               
Conread position:
               
4-373
               

               
Cow position:
               
chr1:16060803-16061183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
123, 77
               

               
Conread position:
               
4-373
               

               
Cow position:
               
chr1:22192975-22192596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
125, 69
               

               
Conread position:
               
4-373
               

               
Cow position:
               
chr1:22526079-22525716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
125, 73
               

               
Conread position:
               
4-373
               

               
Cow position:
               
chr1:84905855-84906232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
110, 299
               

               
Conread position:
               
4-374
               

               
Cow position:
               
chr1:61391591-61391954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
229, 14
               

               
Conread position:
               
4-374
               

               
Cow position:
               
chr1:87095006-87095396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
114, 382
               

               
Conread position:
               
4-375
               

               
Cow position:
               
chr1:76612927-76613297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
121, 263
               

               
Conread position:
               
4-380
               

               
Cow position:
               
chr1:74083983-74084369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 161
               

               
Conread position:
               
4-381
               

               
Cow position:
               
chr1:20667545-20667919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 35
               

               
Conread position:
               
4-385
               

               
Cow position:
               
chr1:72011617-72011985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
265, 112
               

               
Conread position:
               
4-387
               

               
Cow position:
               
chr1:43352448-43352840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 170
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr1:36998387-36998008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
120, 84
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr1:68763479-68763866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
111, 176
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr1:79844684-79844284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
50, 248
               

               
Conread position:
               
4-389
               

               
Cow position:
               
chr1:18936632-18937019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
124, 63
               

               
Conread position:
               
4-389
               

               
Cow position:
               
chr1:54206614-54207004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
124, 68
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr1:3429309-3429694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
120, 102
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr1:22729259-22728861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
128, 23
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr1:25383874-25383476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
124, 86
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr1:40600230-40599862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
219, 35
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr1:56477790-56477408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
114, 67
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr1:75745065-75744674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
124, 27
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr1:83072645-83072257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
124, 10
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr1:94226339-94226735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
68, 194
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr1:96964524-96964133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 170
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:1956133-1956516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
20, 33
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:10633245-10632865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
263, 35
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:10941893-10942280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
124, 68
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:10964493-10964106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
124, 68
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:22730938-22730573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
114, 89
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:24132858-24133244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
124, 77
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:31934709-31934325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
124, 68
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:34160033-34159643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
125, 69
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:44507173-44506779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 124
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:51394623-51394236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
124, 87
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:52496973-52496593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
119, 32
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:54199192-54199572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 16
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:54478521-54478136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
171, 84
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:56225671-56225287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
124, 26
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:63390559-63390962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:68863224-68862847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
103, 78
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:69539890-69539509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
67, 82
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:73584200-73584590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
79, 167
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:78092245-78091848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 245
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:81228131-81228528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
124, 27
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:82936400-82936770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
124, 25
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:83083200-83082813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
213, 53
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:84811736-84812125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
124, 68
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:86279622-86279226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
97, 206
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:87072899-87072516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
114, 58
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:90975871-90976271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 119
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:91065952-91066337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
124, 68
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:95101156-95100773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
136, 88
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:97755705-97755333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
216, 7
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr1:101822299-101822686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
72, 177
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr1:15547670-15547279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
123, 68
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr1:34771294-34771693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
88, 31
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr1:42397991-42398386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 123
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr1:76470862-76470470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
19, 150
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr1:78857121-78857512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
124, 228
               

               
Conread position:
               
4-394
               

               
Cow position:
               
chr1:54156529-54156931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 93
               

               
Conread position:
               
4-397
               

               
Cow position:
               
chr1:85029141-85028766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
181, 65
               

               
Conread position:
               
5-126
               

               
Cow position:
               
chr1:61560292-61560415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
5-200
               

               
Cow position:
               
chr1:60603366-60603570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
5-225
               

               
Cow position:
               
chr1:81858697-81858920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
124, 70
               

               
Conread position:
               
5-229
               

               
Cow position:
               
chr1:5751519-5751291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
123, 60
               

               
Conread position:
               
5-254
               

               
Cow position:
               
chr1:60045191-60044939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
123, 101
               

               
Conread position:
               
5-263
               

               
Cow position:
               
chr1:81481182-81481440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
123, 6
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr1:48206336-48206593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
123, 30
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr1:77739929-77739658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
5, 106
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr1:17875509-17875804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
120, 67
               

               
Conread position:
               
5-317
               

               
Cow position:
               
chr1:43855493-43855191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
123, 67
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr1:47886278-47886629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
122, 9
               

               
Conread position:
               
5-353
               

               
Cow position:
               
chr1:14759152-14759495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
116, 34
               

               
Conread position:
               
5-363
               

               
Cow position:
               
chr1:27145440-27145805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
78, 229
               

               
Conread position:
               
5-363
               

               
Cow position:
               
chr1:38754121-38753762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
123, 67
               

               
Conread position:
               
5-363
               

               
Cow position:
               
chr1:42256301-42256659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
123, 33
               

               
Conread position:
               
5-363
               

               
Cow position:
               
chr1:97232175-97231802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
90, 36
               

               
Conread position:
               
5-373
               

               
Cow position:
               
chr1:13547780-13548154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
119, 15
               

               
Conread position:
               
5-389
               

               
Cow position:
               
chr1:1980906-1981295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
5-389
               

               
Cow position:
               
chr1:61741760-61742152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
5-390
               

               
Cow position:
               
chr1:22836604-22836216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
109, 31
               

               
Conread position:
               
5-394
               

               
Cow position:
               
chr1:70538810-70538413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
123, 81
               

               
Conread position:
               
6-122
               

               
Cow position:
               
chr1:8134128-8134013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
6-199
               

               
Cow position:
               
chr1:78029823-78030024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
6-200
               

               
Cow position:
               
chr1:71945877-71946077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
86, 36
               

               
Conread position:
               
6-234
               

               
Cow position:
               
chr1:57089476-57089707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
132, 12
               

               
Conread position:
               
6-274
               

               
Cow position:
               
chr1:46143264-46143530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 119
               

               
Conread position:
               
6-294
               

               
Cow position:
               
chr1:100474442-100474144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
6-347
               

               
Cow position:
               
chr1:48443988-48444333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 71
               

               
Conread position:
               
6-354
               

               
Cow position:
               
chr1:19970391-19970747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
111, 32
               

               
Conread position:
               
6-363
               

               
Cow position:
               
chr1:81568826-81569186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
121, 92
               

               
Conread position:
               
6-363
               

               
Cow position:
               
chr1:86672016-86672380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
120, 32
               

               
Conread position:
               
6-363
               

               
Cow position:
               
chr1:90621303-90621666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
122, 52
               

               
Conread position:
               
6-390
               

               
Cow position:
               
chr1:33330899-33331275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
122, 35
               

               
Conread position:
               
6-392
               

               
Cow position:
               
chr1:71228298-71227888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
119, 158
               

               
Conread position:
               
6-392
               

               
Cow position:
               
chr1:100422023-100421655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
263, 31
               

               
Conread position:
               
6-399
               

               
Cow position:
               
chr1:42175931-42175534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 82
               

               
Conread position:
               
7-199
               

               
Cow position:
               
chr1:96201113-96201308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
7-209
               

               
Cow position:
               
chr1:150722-150927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
120, 20
               

               
Conread position:
               
7-209
               

               
Cow position:
               
chr1:97540841-97540633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
7-215
               

               
Cow position:
               
chr1:36080029-36079816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
7-267
               

               
Cow position:
               
chr1:22035810-22035549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
117, 65
               

               
Conread position:
               
7-339
               

               
Cow position:
               
chr1:6294292-6294629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
107, 254
               

               
Conread position:
               
7-363
               

               
Cow position:
               
chr1:14308827-14309193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
7-363
               

               
Cow position:
               
chr1:16766884-16767236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
121, 81
               

               
Conread position:
               
7-363
               

               
Cow position:
               
chr1:21508598-21508235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
121, 292
               

               
Conread position:
               
7-392
               

               
Cow position:
               
chr1:36880488-36880090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
121, 8
               

               
Conread position:
               
7-404
               

               
Cow position:
               
chr1:24908841-24909252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
121, 13
               

               
Conread position:
               
8-205
               

               
Cow position:
               
chr1:82336872-82336680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
105, 89
               

               
Conread position:
               
8-230
               

               
Cow position:
               
chr1:95618842-95618618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
120, 85
               

               
Conread position:
               
8-234
               

               
Cow position:
               
chr1:41027273-41027048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
120, 78
               

               
Conread position:
               
8-237
               

               
Cow position:
               
chr1:73721565-73721329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
111, 98
               

               
Conread position:
               
8-246
               

               
Cow position:
               
chr1:95835594-95835836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
116, 224
               

               
Conread position:
               
8-262
               

               
Cow position:
               
chr1:81391123-81390862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
8-273
               

               
Cow position:
               
chr1:6590238-6589974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
69, 210
               

               
Conread position:
               
8-274
               

               
Cow position:
               
chr1:30983291-30983558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
84, 169
               

               
Conread position:
               
8-313
               

               
Cow position:
               
chr1:82880832-82880538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
223, 82
               

               
Conread position:
               
8-327
               

               
Cow position:
               
chr1:67585752-67585426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
222, 113
               

               
Conread position:
               
8-346
               

               
Cow position:
               
chr1:89449099-89448759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
117, 53
               

               
Conread position:
               
8-349
               

               
Cow position:
               
chr1:86056877-86057199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
120, 63
               

               
Conread position:
               
8-353
               

               
Cow position:
               
chr1:20950918-20950576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
120, 198
               

               
Conread position:
               
8-358
               

               
Cow position:
               
chr1:86113195-86113561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
86, 314
               

               
Conread position:
               
8-359
               

               
Cow position:
               
chr1:57575563-57575910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
120, 78
               

               
Conread position:
               
8-359
               

               
Cow position:
               
chr1:95558240-95557885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
120, 19
               

               
Conread position:
               
8-360
               

               
Cow position:
               
chr1:43872108-43872483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
64, 157
               

               
Conread position:
               
8-360
               

               
Cow position:
               
chr1:62519567-62519205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 166
               

               
Conread position:
               
8-360
               

               
Cow position:
               
chr1:86579174-86578798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 180
               

               
Conread position:
               
8-363
               

               
Cow position:
               
chr1:6304676-6305020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
259, 65
               

               
Conread position:
               
8-363
               

               
Cow position:
               
chr1:26178607-26178966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
124, 219
               

               
Conread position:
               
8-363
               

               
Cow position:
               
chr1:82337579-82337936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 61
               

               
Conread position:
               
8-363
               

               
Cow position:
               
chr1:83982175-83982528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
96, 210
               

               
Conread position:
               
8-370
               

               
Cow position:
               
chr1:65318778-65318411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 105
               

               
Conread position:
               
8-380
               

               
Cow position:
               
chr1:46030163-46030529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
65, 94
               

               
Conread position:
               
8-384
               

               
Cow position:
               
chr1:24777783-24778159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
58, 172
               

               
Conread position:
               
8-389
               

               
Cow position:
               
chr1:14379349-14379716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
120, 77
               

               
Conread position:
               
8-389
               

               
Cow position:
               
chr1:28563360-28563754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
66, 173
               

               
Conread position:
               
8-392
               

               
Cow position:
               
chr1:39426816-39427170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
259, 52
               

               
Conread position:
               
8-392
               

               
Cow position:
               
chr1:40192502-40192866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
63, 128
               

               
Conread position:
               
8-392
               

               
Cow position:
               
chr1:45555566-45555175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
120, 31
               

               
Conread position:
               
8-392
               

               
Cow position:
               
chr1:48105224-48105622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 143
               

               
Conread position:
               
8-392
               

               
Cow position:
               
chr1:53521106-53520718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
80, 28
               

               
Conread position:
               
8-392
               

               
Cow position:
               
chr1:68826723-68827094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
110, 33
               

               
Conread position:
               
8-392
               

               
Cow position:
               
chr1:99609568-99609177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
120, 71
               

               
Conread position:
               
9-247
               

               
Cow position:
               
chr1:67529256-67529014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
120, 58
               

               
Conread position:
               
9-292
               

               
Cow position:
               
chr1:33914029-33913735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
119, 8
               

               
Conread position:
               
9-324
               

               
Cow position:
               
chr1:42541791-42541479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
120, 22
               

               
Conread position:
               
9-363
               

               
Cow position:
               
chr1:15334088-15333726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
120, 71
               

               
Conread position:
               
9-390
               

               
Cow position:
               
chr1:68855366-68854988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
119, 86
               

               
Conread position:
               
9-392
               

               
Cow position:
               
chr1:8818-8434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
115, 219
               

               
Conread position:
               
9-392
               

               
Cow position:
               
chr1:34686365-34686006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
129, 20
               

               
Conread position:
               
9-392
               

               
Cow position:
               
chr1:55357089-55357474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
92, 167
               

               
Conread position:
               
10-206
               

               
Cow position:
               
chr1:69691512-69691714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
13, 186
               

               
Conread position:
               
10-265
               

               
Cow position:
               
chr1:79004175-79003916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
78, 123
               

               
Conread position:
               
10-291
               

               
Cow position:
               
chr1:96558647-96558919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
118, 194
               

               
Conread position:
               
10-324
               

               
Cow position:
               
chr1:6826093-6826405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
10-328
               

               
Cow position:
               
chr1:72813817-72813492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
7, 40
               

               
Conread position:
               
10-363
               

               
Cow position:
               
chr1:93528893-93528539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
97, 108
               

               
Conread position:
               
10-385
               

               
Cow position:
               
chr1:31348239-31348616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
10-392
               

               
Cow position:
               
chr1:34856425-34856817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 311
               

               
Conread position:
               
12-265
               

               
Cow position:
               
chr1:95072540-95072272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
12-329
               

               
Cow position:
               
chr1:3607992-3607689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
255, 83
               

               
Conread position:
               
12-392
               

               
Cow position:
               
chr1:20002037-20002424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
102, 35
               

               
Conread position:
               
12-392
               

               
Cow position:
               
chr1:68618743-68619126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
100, 24
               

               
Conread position:
               
13-284
               

               
Cow position:
               
chr1:98467998-98467730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
38, 149
               

               
Conread position:
               
13-366
               

               
Cow position:
               
chr1:33409427-33409786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
114, 93
               

               
Conread position:
               
15-335
               

               
Cow position:
               
chr1:95638029-95637702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
117, 264
               

               
Conread position:
               
15-340
               

               
Cow position:
               
chr1:101714886-101715219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
116, 104
               

               
Conread position:
               
15-392
               

               
Cow position:
               
chr1:88618801-88618405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
84, 27
               

               
Conread position:
               
15-392
               

               
Cow position:
               
chr1:100400010-100400390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
157, 80
               

               
Conread position:
               
15-393
               

               
Cow position:
               
chr1:53623148-53622774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
113, 58
               

               
Conread position:
               
16-327
               

               
Cow position:
               
chr1:47288437-47288120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
16-336
               

               
Cow position:
               
chr1:100324565-100324871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 61
               

               
Conread position:
               
16-373
               

               
Cow position:
               
chr1:102349566-102349920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
113, 40
               

               
Conread position:
               
16-390
               

               
Cow position:
               
chr1:58754605-58754971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
96, 42
               

               
Conread position:
               
16-390
               

               
Cow position:
               
chr1:100741475-100741105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
75, 157
               

               
Conread position:
               
16-391
               

               
Cow position:
               
chr1:78810073-78809696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
80, 22
               

               
Conread position:
               
16-392
               

               
Cow position:
               
chr1:6959072-6958690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
113, 66
               

               
Conread position:
               
16-392
               

               
Cow position:
               
chr1:82884183-82884578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
50, 240
               

               
Conread position:
               
20-363
               

               
Cow position:
               
chr1:99512074-99512408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
37, 15
               

               
Conread position:
               
21-313
               

               
Cow position:
               
chr1:77425423-77425718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
107, 144
               

               
Conread position:
               
21-349
               

               
Cow position:
               
chr1:2975801-2976136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
80, 194
               

               
Conread position:
               
21-353
               

               
Cow position:
               
chr1:6228393-6228730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
21-353
               

               
Cow position:
               
chr1:17196437-17196773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
107, 74
               

               
Conread position:
               
21-360
               

               
Cow position:
               
chr1:6078088-6077746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
49, 110
               

               
Conread position:
               
21-363
               

               
Cow position:
               
chr1:98453783-98453430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
109, 129
               

               
Conread position:
               
21-374
               

               
Cow position:
               
chr1:49082934-49082561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
107, 224
               

               
Conread position:
               
21-392
               

               
Cow position:
               
chr1:23633739-23634089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
107, 152
               

               
Conread position:
               
21-392
               

               
Cow position:
               
chr1:68845318-68845674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
212, 52
               

               
Conread position:
               
22-287
               

               
Cow position:
               
chr1:53402971-53402701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
106, 175
               

               
Conread position:
               
22-392
               

               
Cow position:
               
chr1:6941653-6941277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
107, 60
               

               
Conread position:
               
22-393
               

               
Cow position:
               
chr1:1499503-1499890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
107, 213
               

               
Conread position:
               
23-283
               

               
Cow position:
               
chr1:60987178-60986911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
101, 172
               

               
Conread position:
               
23-353
               

               
Cow position:
               
chr1:42968131-42968459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
73, 9
               

               
Conread position:
               
23-360
               

               
Cow position:
               
chr1:101551638-101551309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
147, 39
               

               
Conread position:
               
23-363
               

               
Cow position:
               
chr1:91816582-91816925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
104, 229
               

               
Conread position:
               
23-392
               

               
Cow position:
               
chr1:71078776-71079145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
105, 49
               

               
Conread position:
               
24-291
               

               
Cow position:
               
chr1:101791932-101792199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
70, 101
               

               
Conread position:
               
24-346
               

               
Cow position:
               
chr1:43311583-43311911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
104, 254
               

               
Conread position:
               
24-359
               

               
Cow position:
               
chr1:3419992-3419650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
104, 76
               

               
Conread position:
               
24-360
               

               
Cow position:
               
chr1:99642184-99642518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
112, 64
               

               
Conread position:
               
24-363
               

               
Cow position:
               
chr1:86483093-86482751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 236
               

               
Conread position:
               
25-363
               

               
Cow position:
               
chr1:19569040-19568697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
7, 152
               

               
Conread position:
               
26-343
               

               
Cow position:
               
chr1:70297465-70297142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 267
               

               
Conread position:
               
27-363
               

               
Cow position:
               
chr1:46035766-46036115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
100, 280
               

               
Conread position:
               
27-374
               

               
Cow position:
               
chr1:65904813-65905173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
98, 352
               

               
Conread position:
               
27-392
               

               
Cow position:
               
chr1:72104036-72103658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
28-353
               

               
Cow position:
               
chr1:90864110-90864441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
77, 26
               

               
Conread position:
               
29-363
               

               
Cow position:
               
chr1:78097106-78096781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
31-363
               

               
Cow position:
               
chr1:51770273-51769932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
97, 207
               

               
Conread position:
               
31-390
               

               
Cow position:
               
chr1:98551916-98551526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
45, 97
               

               
Conread position:
               
31-392
               

               
Cow position:
               
chr1:13637487-13637859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
96, 46
               

               
Conread position:
               
32-369
               

               
Cow position:
               
chr1:96712630-96712975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
107, 90
               

               
Conread position:
               
34-363
               

               
Cow position:
               
chr1:49433086-49433416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
83, 197
               

               
Conread position:
               
34-392
               

               
Cow position:
               
chr1:88926204-88926568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
96, 184
               

               
Conread position:
               
38-390
               

               
Cow position:
               
chr1:48581301-48580945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
90, 63
               

               
Conread position:
               
39-373
               

               
Cow position:
               
chr1:31607716-31608063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
89, 133
               

               
Conread position:
               
39-391
               

               
Cow position:
               
chr1:22827316-22826982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
117, 41
               

               
Conread position:
               
39-392
               

               
Cow position:
               
chr1:76019527-76019870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
42-319
               

               
Cow position:
               
chr1:95296437-95296722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 132
               

               
Conread position:
               
42-322
               

               
Cow position:
               
chr1:55819205-55818945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
266, 45
               

               
Conread position:
               
42-345
               

               
Cow position:
               
chr1:101267835-101268146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
82, 8
               

               
Conread position:
               
42-347
               

               
Cow position:
               
chr1:89786079-89785773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
86, 130
               

               
Conread position:
               
42-363
               

               
Cow position:
               
chr1:91811949-91811631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
57, 134
               

               
Conread position:
               
42-373
               

               
Cow position:
               
chr1:73960860-73960537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
42-380
               

               
Cow position:
               
chr1:69694831-69695179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
42-392
               

               
Cow position:
               
chr1:635364-635003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
86, 256
               

               
Conread position:
               
42-393
               

               
Cow position:
               
chr1:95057210-95056866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
227, 7
               

               
Conread position:
               
44-392
               

               
Cow position:
               
chr1:52487813-52488151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
84, 172
               

               
Conread position:
               
46-363
               

               
Cow position:
               
chr1:60032436-60032754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 50
               

               
Conread position:
               
49-372
               

               
Cow position:
               
chr1:11913714-11914041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
61, 225
               

               
Conread position:
               
52-343
               

               
Cow position:
               
chr1:86073750-86073459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
76, 21
               

               
Conread position:
               
54-392
               

               
Cow position:
               
chr1:40530946-40531298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
54-393
               

               
Cow position:
               
chr1:32001167-32001510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
69, 27
               

               
Conread position:
               
60-392
               

               
Cow position:
               
chr1:4032784-4032446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 315
               

               
Conread position:
               
65-392
               

               
Cow position:
               
chr1:94261680-94261359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
66-360
               

               
Cow position:
               
chr1:41115572-41115867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 114
               

               
Conread position:
               
70-284
               

               
Cow position:
               
chr1:8347265-8347046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 165
               

               
Conread position:
               
70-291
               

               
Cow position:
               
chr1:95153364-95153135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 102
               

               
Conread position:
               
70-321
               

               
Cow position:
               
chr1:45553101-45553358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
58, 102
               

               
Conread position:
               
70-346
               

               
Cow position:
               
chr1:85549936-85550216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
70-389
               

               
Cow position:
               
chr1:47233336-47233660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
58, 249
               

               
Conread position:
               
70-390
               

               
Cow position:
               
chr1:81613530-81613199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
59, 13
               

               
Conread position:
               
70-393
               

               
Cow position:
               
chr1:81580319-81579985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 98
               

               
Conread position:
               
71-327
               

               
Cow position:
               
chr1:7023262-7023000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 202
               

               
Conread position:
               
71-392
               

               
Cow position:
               
chr1:52753019-52753354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
61, 206
               

               
Conread position:
               
72-360
               

               
Cow position:
               
chr1:71643520-71643812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
56, 169
               

               
Conread position:
               
74-359
               

               
Cow position:
               
chr1:57420598-57420879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
54, 74
               

               
Conread position:
               
76-355
               

               
Cow position:
               
chr1:85647648-85647929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
76-358
               

               
Cow position:
               
chr1:31272307-31272591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
76-369
               

               
Cow position:
               
chr1:80988482-80988185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
51, 83
               

               
Conread position:
               
77-355
               

               
Cow position:
               
chr1:23512524-23512802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
13, 155
               

               
Conread position:
               
77-364
               

               
Cow position:
               
chr1:74928019-74927724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
51, 175
               

               
Conread position:
               
77-392
               

               
Cow position:
               
chr1:19885516-19885196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
52, 97
               

               
Conread position:
               
77-392
               

               
Cow position:
               
chr1:39417980-39418307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
64, 45
               

               
Conread position:
               
78-335
               

               
Cow position:
               
chr1:100569290-100569024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
50, 176
               

               
Conread position:
               
78-392
               

               
Cow position:
               
chr1:52039770-52039448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
50, 89
               

               
Conread position:
               
79-359
               

               
Cow position:
               
chr1:2737333-2737051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 105
               

               
Conread position:
               
79-381
               

               
Cow position:
               
chr1:101632205-101632511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
80-389
               

               
Cow position:
               
chr1:4291298-4290973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
21, 113
               

               
Conread position:
               
81-353
               

               
Cow position:
               
chr1:91874786-91875053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 62
               

               
Conread position:
               
81-359
               

               
Cow position:
               
chr1:97696875-97696589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
48, 99
               

               
Conread position:
               
81-392
               

               
Cow position:
               
chr1:97611526-97611841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
38, 161
               

               
Conread position:
               
84-355
               

               
Cow position:
               
chr1:83582805-83583081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
44, 234
               

               
Conread position:
               
89-319
               

               
Cow position:
               
chr1:87937020-87936787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
40, 145
               

               
Conread position:
               
89-363
               

               
Cow position:
               
chr1:24534134-24534411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 91
               

               
Conread position:
               
89-373
               

               
Cow position:
               
chr1:24876385-24876101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 84
               

               
Conread position:
               
96-392
               

               
Cow position:
               
chr1:66430407-66430108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
100-389
               

               
Cow position:
               
chr1:95215078-95215371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 128
               

               
Conread position:
               
102-355
               

               
Cow position:
               
chr1:77683462-77683210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
27, 129
               

               
Conread position:
               
102-363
               

               
Cow position:
               
chr1:7350658-7350387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
26, 160
               

               
Conread position:
               
127-393
               

               
Cow position:
               
chr1:56635181-56634909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
14, 187
               

               
Conread position:
               
136-363
               

               
Cow position:
               
chr1:9470327-9470553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
131, 101
               

               
Conread position:
               
136-373
               

               
Cow position:
               
chr1:79278376-79278610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
131, 28
               

               
Conread position:
               
136-392
               

               
Cow position:
               
chr1:42555337-42555081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 32
               

               
Conread position:
               
137-344
               

               
Cow position:
               
chr1:53425247-53425038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 99
               

               
Conread position:
               
137-352
               

               
Cow position:
               
chr1:71305751-71305547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
179, 93
               

               
Conread position:
               
137-363
               

               
Cow position:
               
chr1:91800530-91800757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
99, 22
               

               
Conread position:
               
137-373
               

               
Cow position:
               
chr1:81868659-81868890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
137-378
               

               
Cow position:
               
chr1:72141645-72141390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
91, 58
               

               
Conread position:
               
137-390
               

               
Cow position:
               
chr1:20205097-20204840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
103, 34
               

               
Conread position:
               
137-390
               

               
Cow position:
               
chr1:45288801-45289060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
98, 93
               

               
Conread position:
               
137-392
               

               
Cow position:
               
chr1:4374267-4374527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
96, 119
               

               
Conread position:
               
137-392
               

               
Cow position:
               
chr1:91039104-91039365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
102, 35
               

               
Conread position:
               
139-392
               

               
Cow position:
               
chr1:94404282-94404028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
99, 183
               

               
Conread position:
               
140-358
               

               
Cow position:
               
chr1:101946647-101946857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
130, 87
               

               
Conread position:
               
140-392
               

               
Cow position:
               
chr1:81563812-81563544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 189
               

               
Conread position:
               
141-392
               

               
Cow position:
               
chr1:102647207-102647457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
128, 103
               

               
Conread position:
               
142-392
               

               
Cow position:
               
chr1:98311135-98310873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
146-363
               

               
Cow position:
               
chr1:24445567-24445782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
121, 33
               

               
Conread position:
               
149-357
               

               
Cow position:
               
chr1:93228583-93228376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
120, 88
               

               
Conread position:
               
156-390
               

               
Cow position:
               
chr1:89498007-89497779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 62
               

               
Conread position:
               
157-363
               

               
Cow position:
               
chr1:98563212-98563008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
112, 88
               

               
Conread position:
               
163-360
               

               
Cow position:
               
chr1:45535751-45535553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 159
               

               
Conread position:
               
168-360
               

               
Cow position:
               
chr1:51684844-51684651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
66, 6
               

               
Conread position:
               
172-392
               

               
Cow position:
               
chr1:76222653-76222879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 129
               

               
Conread position:
               
172-395
               

               
Cow position:
               
chr1:9166739-9166964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
45, 75
               

               
Conread position:
               
173-388
               

               
Cow position:
               
chr1:99039321-99039537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
187, 96
               

               
Conread position:
               
173-389
               

               
Cow position:
               
chr1:50679244-50679471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
173-391
               

               
Cow position:
               
chr1:81471167-81470941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
94, 142
               

               
Conread position:
               
173-392
               

               
Cow position:
               
chr1:99136396-99136619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
67, 26
               

               
Conread position:
               
174-373
               

               
Cow position:
               
chr1:44769076-44769276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
174-392
               

               
Cow position:
               
chr1:57635495-57635278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
93, 139
               

               
Conread position:
               
174-392
               

               
Cow position:
               
chr1:73561614-73561838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
59, 105
               

               
Conread position:
               
174-392
               

               
Cow position:
               
chr1:82443421-82443645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
174-392
               

               
Cow position:
               
chr1:100512642-100512407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
176-363
               

               
Cow position:
               
chr1:95922345-95922534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 11
               

               
Conread position:
               
177-366
               

               
Cow position:
               
chr1:38544434-38544619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
92, 60
               

               
Conread position:
               
179-360
               

               
Cow position:
               
chr1:61351172-61350999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
179-360
               

               
Cow position:
               
chr1:80631726-80631548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
132, 54
               

               
Conread position:
               
179-363
               

               
Cow position:
               
chr1:64421359-64421179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
54, 95
               

               
Conread position:
               
179-374
               

               
Cow position:
               
chr1:11770264-11770455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
90, 58
               

               
Conread position:
               
179-392
               

               
Cow position:
               
chr1:52956286-52956071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
17, 146
               

               
Conread position:
               
179-393
               

               
Cow position:
               
chr1:26702175-26702397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 139
               

               
Conread position:
               
180-363
               

               
Cow position:
               
chr1:34000937-34000754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
90, 7
               

               
Conread position:
               
180-390
               

               
Cow position:
               
chr1:95050059-95050286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 81
               

               
Conread position:
               
180-392
               

               
Cow position:
               
chr1:22448554-22448775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
43, 140
               

               
Conread position:
               
180-392
               

               
Cow position:
               
chr1:36932183-36931971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 41
               

               
Conread position:
               
180-392
               

               
Cow position:
               
chr1:43447801-43448011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
53, 89
               

               
Conread position:
               
181-388
               

               
Cow position:
               
chr1:88652657-88652446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
53, 76
               

               
Conread position:
               
182-363
               

               
Cow position:
               
chr1:98557760-98557935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
139, 6
               

               
Conread position:
               
183-363
               

               
Cow position:
               
chr1:78154698-78154876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 8
               

               
Conread position:
               
184-360
               

               
Cow position:
               
chr1:81638428-81638250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
83, 93
               

               
Conread position:
               
184-372
               

               
Cow position:
               
chr1:100812552-100812734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
52, 84
               

               
Conread position:
               
184-391
               

               
Cow position:
               
chr1:41954218-41954441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
184-392
               

               
Cow position:
               
chr1:33811953-33811746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
47, 73
               

               
Conread position:
               
184-392
               

               
Cow position:
               
chr1:56674103-56674318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
52, 45
               

               
Conread position:
               
187-363
               

               
Cow position:
               
chr1:85826367-85826191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 54
               

               
Conread position:
               
187-392
               

               
Cow position:
               
chr1:84240912-84240711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
80, 50
               

               
Conread position:
               
188-363
               

               
Cow position:
               
chr1:86512150-86511975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
79, 41
               

               
Conread position:
               
190-359
               

               
Cow position:
               
chr1:95654696-95654863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
39, 48
               

               
Conread position:
               
190-363
               

               
Cow position:
               
chr1:63905457-63905626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
79, 43
               

               
Conread position:
               
190-365
               

               
Cow position:
               
chr1:64962650-64962826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
190-368
               

               
Cow position:
               
chr1:1802158-1801979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
40, 83
               

               
Conread position:
               
190-390
               

               
Cow position:
               
chr1:85596961-85596758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
39, 163
               

               
Conread position:
               
190-392
               

               
Cow position:
               
chr1:78783565-78783358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
42, 59
               

               
Conread position:
               
190-393
               

               
Cow position:
               
chr1:666383-666171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
190-393
               

               
Cow position:
               
chr1:43703426-43703225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
43, 126
               

               
Conread position:
               
190-401
               

               
Cow position:
               
chr1:83593791-83594005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
80, 43
               

               
Conread position:
               
191-391
               

               
Cow position:
               
chr1:3137944-3137745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
9, 45
               

               
Conread position:
               
192-363
               

               
Cow position:
               
chr1:31234916-31235083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
192-392
               

               
Cow position:
               
chr1:12595886-12596090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
38, 131
               

               
Conread position:
               
192-392
               

               
Cow position:
               
chr1:20384604-20384809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
52, 38
               

               
Conread position:
               
192-392
               

               
Cow position:
               
chr1:39068941-39069139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
192-392
               

               
Cow position:
               
chr1:68951642-68951443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
75, 45
               

               
Conread position:
               
192-393
               

               
Cow position:
               
chr1:57900726-57900930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 52
               

               
Conread position:
               
193-384
               

               
Cow position:
               
chr1:102825803-102825994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
34, 40
               

               
Conread position:
               
195-358
               

               
Cow position:
               
chr1:70312793-70312955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 61
               

               
Conread position:
               
195-392
               

               
Cow position:
               
chr1:56658045-56657850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
72, 99
               

               
Conread position:
               
195-392
               

               
Cow position:
               
chr1:64251034-64251240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
196-394
               

               
Cow position:
               
chr1:5872956-5873162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
201-380
               

               
Cow position:
               
chr1:101007614-101007796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
66, 32
               

               
Conread position:
               
201-392
               

               
Cow position:
               
chr1:22467943-22467742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
202-392
               

               
Cow position:
               
chr1:87216464-87216274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 14
               

               
Conread position:
               
204-392
               

               
Cow position:
               
chr1:41004357-41004556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 119
               

               
Conread position:
               
204-393
               

               
Cow position:
               
chr1:19998039-19998225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
204-393
               

               
Cow position:
               
chr1:99095367-99095174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
31, 164
               

               
Conread position:
               
205-392
               

               
Cow position:
               
chr1:4294059-4293874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
23, 111
               

               
Conread position:
               
213-392
               

               
Cow position:
               
chr1:71045749-71045566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
53, 102
               

               
Conread position:
               
213-404
               

               
Cow position:
               
chr1:44125652-44125841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 108
               

               
Conread position:
               
216-392
               

               
Cow position:
               
chr1:51654404-51654222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
218-373
               

               
Cow position:
               
chr1:3244836-3244689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
220-370
               

               
Cow position:
               
chr1:57264008-57264162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
49, 95
               

               
Conread position:
               
222-346
               

               
Cow position:
               
chr1:73536725-73536598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
222-360
               

               
Cow position:
               
chr1:57698462-57698602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
97, 39
               

               
Conread position:
               
222-388
               

               
Cow position:
               
chr1:45673695-45673526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
222-392
               

               
Cow position:
               
chr1:21835929-21835760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
145, 46
               

               
Conread position:
               
222-392
               

               
Cow position:
               
chr1:84116379-84116213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
153, 11
               

               
Conread position:
               
223-346
               

               
Cow position:
               
chr1:90595567-90595693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
223-360
               

               
Cow position:
               
chr1:20288102-20287966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 12
               

               
Conread position:
               
223-363
               

               
Cow position:
               
chr1:100745591-100745451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
227-359
               

               
Cow position:
               
chr1:24655941-24655810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
94, 18
               

               
Conread position:
               
227-390
               

               
Cow position:
               
chr1:100770770-100770925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
35, 6
               

               
Conread position:
               
227-392
               

               
Cow position:
               
chr1:46939878-46940050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 61
               

               
Conread position:
               
227-392
               

               
Cow position:
               
chr1:49839486-49839319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
42, 92
               

               
Conread position:
               
227-392
               

               
Cow position:
               
chr1:53613214-53613381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 29
               

               
Conread position:
               
227-392
               

               
Cow position:
               
chr1:101207802-101207644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
228-390
               

               
Cow position:
               
chr1:21131115-21131271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
39, 87
               

               
Conread position:
               
229-392
               

               
Cow position:
               
chr1:81363968-81363803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 16
               

               
Conread position:
               
231-393
               

               
Cow position:
               
chr1:32631438-32631277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
90, 34
               

               
Conread position:
               
233-359
               

               
Cow position:
               
chr1:65909502-65909375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
233-363
               

               
Cow position:
               
chr1:81179997-81180131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
233-388
               

               
Cow position:
               
chr1:75933248-75933088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
6, 83
               

               
Conread position:
               
234-392
               

               
Cow position:
               
chr1:52506581-52506733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
35, 58
               

               
Conread position:
               
237-396
               

               
Cow position:
               
chr1:9534143-9533985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
32, 113
               

               
Conread position:
               
238-392
               

               
Cow position:
               
chr1:98708410-98708254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
242-354
               

               
Cow position:
               
chr1:20799851-20799735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 60
               

               
Conread position:
               
242-360
               

               
Cow position:
               
chr1:56711653-56711771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
25, 110
               

               
Conread position:
               
242-363
               

               
Cow position:
               
chr1:89395567-89395441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
242-392
               

               
Cow position:
               
chr1:75967397-75967248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
27, 79
               

               
Conread position:
               
242-392
               

               
Cow position:
               
chr1:97806754-97806600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
27, 79
               

               
Conread position:
               
243-390
               

               
Cow position:
               
chr1:89083075-89082921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
247-391
               

               
Cow position:
               
chr1:7450091-7449945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
254-392
               

               
Cow position:
               
chr1:51531720-51531585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 95
               
Show alignments to all cow chromosomes.