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Cow genome map

           
Conread name:
           
Lym1-jns73_D06.f
        

               
Conread position:
               
1-116
               

               
Cow position:
               
chr15:36539831-36539943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-117
               

               
Cow position:
               
chr15:26380860-26380744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-127
               

               
Cow position:
               
chr15:37237554-37237679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
1-154
               

               
Cow position:
               
chr15:20566015-20566173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr15:17124584-17124422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr15:21710222-21710062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
118, 22
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr15:43634143-43633986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr15:15680957-15680788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr15:44119582-44119413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
123, 48
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr15:29927851-29928054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr15:48095243-48095457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 178
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr15:38652716-38652482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr15:9978990-9979222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
127, 37
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr15:42380815-42381066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
127, 34
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr15:15177204-15177467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
127, 52
               

               
Conread position:
               
1-274
               

               
Cow position:
               
chr15:42888948-42888675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
127, 173
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr15:13432369-13432665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 79
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr15:35419707-35419375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
42, 289
               

               
Conread position:
               
1-315
               

               
Cow position:
               
chr15:43674061-43673734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr15:31929011-31928694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
46, 88
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr15:1857613-1857956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
123, 53
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr15:662577-662241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
127, 72
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr15:38161887-38162248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
126, 37
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr15:1301033-1301383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
266, 122
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr15:18975876-18975518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
98, 34
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr15:30047667-30047295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
91, 326
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr15:38837631-38837994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
99, 193
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr15:35839210-35838840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
131, 95
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr15:275530-275894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
59, 176
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr15:4789080-4788720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
124, 94
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr15:31857476-31857839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 59
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr15:36435089-36435457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 231
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr15:39373568-39373182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr15:40798531-40798178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr15:47990879-47990515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
228, 105
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr15:23572802-23572419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 173
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr15:47844201-47843850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
127, 29
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr15:10088206-10088597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 77
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr15:6227289-6226914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
127, 34
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr15:11658696-11658281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
78, 87
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr15:20534566-20534166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 279
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr15:21608836-21608447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
89, 105
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr15:24616454-24616851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
87, 361
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr15:25667338-25666937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 173
               

               
Conread position:
               
2-341
               

               
Cow position:
               
chr15:53716323-53716661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
126, 7
               

               
Conread position:
               
3-376
               

               
Cow position:
               
chr15:5571740-5571373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
125, 35
               

               
Conread position:
               
3-392
               

               
Cow position:
               
chr15:15041539-15041151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
60, 233
               

               
Conread position:
               
4-122
               

               
Cow position:
               
chr15:30956434-30956318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
4-122
               

               
Cow position:
               
chr15:36904192-36904311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
4-165
               

               
Cow position:
               
chr15:11909057-11908895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
124, 68
               

               
Conread position:
               
4-166
               

               
Cow position:
               
chr15:44089275-44089109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
4-186
               

               
Cow position:
               
chr15:28067816-28067640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
136, 31
               

               
Conread position:
               
4-196
               

               
Cow position:
               
chr15:52791830-52792021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
120, 133
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr15:34223757-34223959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
4-208
               

               
Cow position:
               
chr15:49491542-49491740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
134, 27
               

               
Conread position:
               
4-209
               

               
Cow position:
               
chr15:39474045-39473838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
124, 161
               

               
Conread position:
               
4-214
               

               
Cow position:
               
chr15:22444097-22443886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
120, 169
               

               
Conread position:
               
4-231
               

               
Cow position:
               
chr15:8679869-8679637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
123, 198
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr15:7751024-7750792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
124, 62
               

               
Conread position:
               
4-239
               

               
Cow position:
               
chr15:15154189-15154428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
4-240
               

               
Cow position:
               
chr15:8636404-8636165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
124, 82
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr15:38827425-38827173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
103, 78
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr15:36952309-36952047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
124, 31
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr15:43114828-43114569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
4-271
               

               
Cow position:
               
chr15:25571922-25571648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
4-272
               

               
Cow position:
               
chr15:19554036-19553763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
119, 91
               

               
Conread position:
               
4-273
               

               
Cow position:
               
chr15:31028770-31028495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
123, 245
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr15:36846297-36846012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
124, 186
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr15:41053881-41053604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
4-281
               

               
Cow position:
               
chr15:41625008-41624717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
7, 93
               

               
Conread position:
               
4-282
               

               
Cow position:
               
chr15:41528076-41527806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
127, 27
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr15:5409004-5408731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
120, 68
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr15:8444362-8444640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
123, 168
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr15:40231008-40231288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
124, 201
               

               
Conread position:
               
4-285
               

               
Cow position:
               
chr15:28047871-28047581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
94, 35
               

               
Conread position:
               
4-305
               

               
Cow position:
               
chr15:4919180-4918873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
66, 169
               

               
Conread position:
               
4-306
               

               
Cow position:
               
chr15:14474230-14474532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
123, 218
               

               
Conread position:
               
4-306
               

               
Cow position:
               
chr15:19807833-19807523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
67, 223
               

               
Conread position:
               
4-311
               

               
Cow position:
               
chr15:14740797-14740484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
4-313
               

               
Cow position:
               
chr15:33693482-33693161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
124, 250
               

               
Conread position:
               
4-313
               

               
Cow position:
               
chr15:37865250-37865567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
66, 17
               

               
Conread position:
               
4-318
               

               
Cow position:
               
chr15:34284518-34284205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
114, 13
               

               
Conread position:
               
4-318
               

               
Cow position:
               
chr15:36635919-36636244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
65, 275
               

               
Conread position:
               
4-319
               

               
Cow position:
               
chr15:5158261-5158582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
120, 248
               

               
Conread position:
               
4-323
               

               
Cow position:
               
chr15:5717609-5717921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
134, 68
               

               
Conread position:
               
4-324
               

               
Cow position:
               
chr15:34478578-34478907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
117, 305
               

               
Conread position:
               
4-332
               

               
Cow position:
               
chr15:30471089-30470750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
88, 322
               

               
Conread position:
               
4-335
               

               
Cow position:
               
chr15:24804910-24804566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
117, 93
               

               
Conread position:
               
4-339
               

               
Cow position:
               
chr15:1502803-1503131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
228, 57
               

               
Conread position:
               
4-340
               

               
Cow position:
               
chr15:8604109-8604449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
126, 34
               

               
Conread position:
               
4-341
               

               
Cow position:
               
chr15:4418512-4418172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
99, 91
               

               
Conread position:
               
4-341
               

               
Cow position:
               
chr15:9648799-9648476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
263, 65
               

               
Conread position:
               
4-341
               

               
Cow position:
               
chr15:36353556-36353897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
20, 71
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr15:27900615-27900276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
124, 48
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr15:28924872-28924530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
29, 74
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr15:16439944-16439592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
123, 169
               

               
Conread position:
               
4-353
               

               
Cow position:
               
chr15:286362-286719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
67, 317
               

               
Conread position:
               
4-353
               

               
Cow position:
               
chr15:5984697-5984351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
128, 117
               

               
Conread position:
               
4-353
               

               
Cow position:
               
chr15:16017923-16018275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
110, 210
               

               
Conread position:
               
4-353
               

               
Cow position:
               
chr15:22930460-22930099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
124, 49
               

               
Conread position:
               
4-353
               

               
Cow position:
               
chr15:32980144-32979797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
124, 41
               

               
Conread position:
               
4-355
               

               
Cow position:
               
chr15:2141431-2141057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
67, 11
               

               
Conread position:
               
4-355
               

               
Cow position:
               
chr15:4179049-4178695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
125, 71
               

               
Conread position:
               
4-358
               

               
Cow position:
               
chr15:22531563-22531902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
124, 68
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr15:36391561-36391914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
113, 233
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr15:44377161-44377521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
124, 25
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr15:795127-794769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
124, 76
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr15:29026993-29026633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 179
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr15:4138024-4138384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
125, 77
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr15:4295650-4296015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
82, 17
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr15:5443871-5444231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
121, 239
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr15:6168643-6168268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
99, 201
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr15:14870645-14870993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
101, 57
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr15:16112284-16112652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
65, 248
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr15:20390820-20390451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
124, 31
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr15:26919379-26919027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
125, 35
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr15:31137575-31137214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 85
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr15:39405632-39405982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 90
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr15:43031136-43030774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
128, 139
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr15:44658256-44658608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
134, 68
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr15:46563587-46563243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
4-364
               

               
Cow position:
               
chr15:38883036-38883404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
67, 22
               

               
Conread position:
               
4-371
               

               
Cow position:
               
chr15:33284766-33285140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
128, 45
               

               
Conread position:
               
4-373
               

               
Cow position:
               
chr15:5499138-5498769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
28, 117
               

               
Conread position:
               
4-373
               

               
Cow position:
               
chr15:17233076-17233454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 247
               

               
Conread position:
               
4-378
               

               
Cow position:
               
chr15:21941958-21941581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 154
               

               
Conread position:
               
4-385
               

               
Cow position:
               
chr15:36259707-36259324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
125, 58
               

               
Conread position:
               
4-387
               

               
Cow position:
               
chr15:11996138-11995746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 93
               

               
Conread position:
               
4-387
               

               
Cow position:
               
chr15:19771027-19771405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 82
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr15:16822839-16823216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr15:42142763-42143135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
339, 110
               

               
Conread position:
               
4-389
               

               
Cow position:
               
chr15:12722974-12723367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
66, 198
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr15:2968224-2968615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 181
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr15:12304529-12304923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
124, 81
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr15:19402895-19403260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
59, 74
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr15:20487311-20486935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
68, 32
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr15:50322501-50322877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 47
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr15:51427936-51427541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
123, 66
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr15:39599339-39599723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
152, 34
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr15:48851603-48851215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
70, 160
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr15:225913-225519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
78, 126
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr15:1722951-1722566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
212, 84
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr15:6462603-6462218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
105, 77
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr15:8006868-8007266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
115, 151
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr15:8665717-8665298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr15:17084096-17084496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
124, 280
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr15:21832554-21832140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
28, 64
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr15:22532143-22532525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
123, 68
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr15:22938877-22938493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 238
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr15:23114724-23115119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
123, 15
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr15:25208869-25208481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
124, 84
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr15:26912178-26911795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr15:29810015-29810393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
124, 61
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr15:36773791-36773410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr15:40957468-40957863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
68, 119
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr15:43626354-43626746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 95
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr15:44051591-44051213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
219, 84
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr15:49922025-49922424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 68
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr15:17100814-17100429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 58
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr15:20370562-20370178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 68
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr15:22939434-22939048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
125, 93
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr15:35641902-35642305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 234
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr15:36621291-36621703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
20, 10
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr15:43827882-43827487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
117, 91
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr15:43914208-43913799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
123, 195
               

               
Conread position:
               
5-136
               

               
Cow position:
               
chr15:51831901-51831768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
5-158
               

               
Cow position:
               
chr15:22242293-22242450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
118, 83
               

               
Conread position:
               
5-167
               

               
Cow position:
               
chr15:12045650-12045482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
5-319
               

               
Cow position:
               
chr15:20314373-20314691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
178, 281
               

               
Conread position:
               
5-384
               

               
Cow position:
               
chr15:32324317-32323929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 162
               

               
Conread position:
               
5-390
               

               
Cow position:
               
chr15:5235100-5234722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 45
               

               
Conread position:
               
5-390
               

               
Cow position:
               
chr15:10246104-10245725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
119, 81
               

               
Conread position:
               
5-392
               

               
Cow position:
               
chr15:50341009-50341399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
6-286
               

               
Cow position:
               
chr15:50552642-50552354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
6-360
               

               
Cow position:
               
chr15:5726207-5726572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
6-360
               

               
Cow position:
               
chr15:50957919-50957551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
57, 240
               

               
Conread position:
               
6-363
               

               
Cow position:
               
chr15:18720227-18720561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
234, 84
               

               
Conread position:
               
6-368
               

               
Cow position:
               
chr15:16603721-16604078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
123, 68
               

               
Conread position:
               
6-390
               

               
Cow position:
               
chr15:21907836-21908219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
131, 18
               

               
Conread position:
               
7-216
               

               
Cow position:
               
chr15:7479105-7478892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
120, 14
               

               
Conread position:
               
7-360
               

               
Cow position:
               
chr15:608036-608394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 225
               

               
Conread position:
               
7-363
               

               
Cow position:
               
chr15:23798629-23798273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
117, 65
               

               
Conread position:
               
7-377
               

               
Cow position:
               
chr15:11560622-11560246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
84, 20
               

               
Conread position:
               
7-392
               

               
Cow position:
               
chr15:24967694-24968076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
100, 111
               

               
Conread position:
               
7-392
               

               
Cow position:
               
chr15:45245648-45245263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
115, 74
               

               
Conread position:
               
7-392
               

               
Cow position:
               
chr15:47042750-47042353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 274
               

               
Conread position:
               
8-221
               

               
Cow position:
               
chr15:50332869-50333089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
76, 159
               

               
Conread position:
               
8-262
               

               
Cow position:
               
chr15:3695531-3695784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
120, 75
               

               
Conread position:
               
8-265
               

               
Cow position:
               
chr15:38860238-38859976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
109, 187
               

               
Conread position:
               
8-286
               

               
Cow position:
               
chr15:25349868-25350140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
129, 65
               

               
Conread position:
               
8-318
               

               
Cow position:
               
chr15:16928195-16927891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
121, 13
               

               
Conread position:
               
8-339
               

               
Cow position:
               
chr15:49273856-49274178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
127, 70
               

               
Conread position:
               
8-344
               

               
Cow position:
               
chr15:11987515-11987176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
120, 64
               

               
Conread position:
               
8-344
               

               
Cow position:
               
chr15:21803771-21803439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
69, 171
               

               
Conread position:
               
8-358
               

               
Cow position:
               
chr15:37381523-37381873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
88, 64
               

               
Conread position:
               
8-360
               

               
Cow position:
               
chr15:1083476-1083128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
111, 27
               

               
Conread position:
               
8-360
               

               
Cow position:
               
chr15:23530617-23530964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
120, 33
               

               
Conread position:
               
8-363
               

               
Cow position:
               
chr15:16667604-16667252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 132
               

               
Conread position:
               
8-363
               

               
Cow position:
               
chr15:30001590-30001936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
8-363
               

               
Cow position:
               
chr15:41225678-41225314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
84, 290
               

               
Conread position:
               
8-363
               

               
Cow position:
               
chr15:45584616-45584972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
62, 173
               

               
Conread position:
               
8-390
               

               
Cow position:
               
chr15:24994617-24994243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
118, 21
               

               
Conread position:
               
8-391
               

               
Cow position:
               
chr15:45478893-45479290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
117, 273
               

               
Conread position:
               
8-392
               

               
Cow position:
               
chr15:5072204-5071816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
63, 195
               

               
Conread position:
               
8-392
               

               
Cow position:
               
chr15:20459417-20459016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
8-392
               

               
Cow position:
               
chr15:27973312-27972931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
261, 69
               

               
Conread position:
               
8-392
               

               
Cow position:
               
chr15:47821727-47822085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
261, 74
               

               
Conread position:
               
8-393
               

               
Cow position:
               
chr15:36887733-36888105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
120, 85
               

               
Conread position:
               
8-394
               

               
Cow position:
               
chr15:21822033-21821634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 222
               

               
Conread position:
               
9-363
               

               
Cow position:
               
chr15:41045297-41045653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
119, 83
               

               
Conread position:
               
9-392
               

               
Cow position:
               
chr15:21893675-21894066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 84
               

               
Conread position:
               
9-393
               

               
Cow position:
               
chr15:39598140-39598523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
64, 113
               

               
Conread position:
               
9-393
               

               
Cow position:
               
chr15:52778629-52778244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
307, 138
               

               
Conread position:
               
10-306
               

               
Cow position:
               
chr15:11424868-11425167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 159
               

               
Conread position:
               
10-342
               

               
Cow position:
               
chr15:22553645-22553313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
118, 62
               

               
Conread position:
               
10-355
               

               
Cow position:
               
chr15:5420987-5420643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 63
               

               
Conread position:
               
10-360
               

               
Cow position:
               
chr15:85350-85001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
114, 71
               

               
Conread position:
               
10-360
               

               
Cow position:
               
chr15:1330213-1329855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
60, 78
               

               
Conread position:
               
10-363
               

               
Cow position:
               
chr15:8579242-8578874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
10-363
               

               
Cow position:
               
chr15:25906813-25907159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
7, 79
               

               
Conread position:
               
10-390
               

               
Cow position:
               
chr15:45530-45134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
118, 38
               

               
Conread position:
               
12-359
               

               
Cow position:
               
chr15:18671551-18671207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
129, 29
               

               
Conread position:
               
13-154
               

               
Cow position:
               
chr15:16657369-16657515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
13-291
               

               
Cow position:
               
chr15:39833079-39832796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
114, 137
               

               
Conread position:
               
13-344
               

               
Cow position:
               
chr15:23866170-23865836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
112, 22
               

               
Conread position:
               
13-353
               

               
Cow position:
               
chr15:38037046-38036698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
115, 25
               

               
Conread position:
               
14-393
               

               
Cow position:
               
chr15:2953233-2952844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 58
               

               
Conread position:
               
15-274
               

               
Cow position:
               
chr15:13783067-13782805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
74, 218
               

               
Conread position:
               
15-314
               

               
Cow position:
               
chr15:40379113-40379414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
106, 150
               

               
Conread position:
               
15-347
               

               
Cow position:
               
chr15:34896662-34896997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 62
               

               
Conread position:
               
15-363
               

               
Cow position:
               
chr15:1804433-1804081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
7, 58
               

               
Conread position:
               
15-389
               

               
Cow position:
               
chr15:21420848-21421223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
123, 23
               

               
Conread position:
               
15-391
               

               
Cow position:
               
chr15:24797902-24797530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
123, 58
               

               
Conread position:
               
16-273
               

               
Cow position:
               
chr15:16664183-16664452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
16-275
               

               
Cow position:
               
chr15:1990005-1990271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
16-304
               

               
Cow position:
               
chr15:9465576-9465870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
108, 229
               

               
Conread position:
               
16-363
               

               
Cow position:
               
chr15:4485050-4485392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
77, 203
               

               
Conread position:
               
16-363
               

               
Cow position:
               
chr15:11559450-11559106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
18-245
               

               
Cow position:
               
chr15:6102257-6102031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
110, 88
               

               
Conread position:
               
21-126
               

               
Cow position:
               
chr15:50953758-50953653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
21-309
               

               
Cow position:
               
chr15:14888730-14888443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
220, 84
               

               
Conread position:
               
21-353
               

               
Cow position:
               
chr15:17196052-17196382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
97, 207
               

               
Conread position:
               
21-354
               

               
Cow position:
               
chr15:35112966-35112636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
21-358
               

               
Cow position:
               
chr15:8353948-8354289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
107, 67
               

               
Conread position:
               
21-359
               

               
Cow position:
               
chr15:6969894-6970230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
107, 14
               

               
Conread position:
               
21-360
               

               
Cow position:
               
chr15:23275440-23275782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
50, 157
               

               
Conread position:
               
21-360
               

               
Cow position:
               
chr15:52482922-52482583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
108, 76
               

               
Conread position:
               
21-360
               

               
Cow position:
               
chr15:53163927-53164266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
108, 76
               

               
Conread position:
               
21-363
               

               
Cow position:
               
chr15:10608402-10608055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
21-392
               

               
Cow position:
               
chr15:9622087-9622477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
107, 221
               

               
Conread position:
               
23-286
               

               
Cow position:
               
chr15:43851678-43851410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
104, 160
               

               
Conread position:
               
23-360
               

               
Cow position:
               
chr15:21583018-21582671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
23-390
               

               
Cow position:
               
chr15:17762817-17763182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
102, 77
               

               
Conread position:
               
23-392
               

               
Cow position:
               
chr15:38394336-38394704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
104, 81
               

               
Conread position:
               
24-309
               

               
Cow position:
               
chr15:38935314-38935605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
67, 225
               

               
Conread position:
               
24-390
               

               
Cow position:
               
chr15:33643001-33643368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
104, 74
               

               
Conread position:
               
27-346
               

               
Cow position:
               
chr15:24031110-24031420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 54
               

               
Conread position:
               
27-380
               

               
Cow position:
               
chr15:23180358-23180703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
58, 95
               

               
Conread position:
               
27-392
               

               
Cow position:
               
chr15:38806592-38806211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
100, 184
               

               
Conread position:
               
27-392
               

               
Cow position:
               
chr15:47274277-47274657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
98, 227
               

               
Conread position:
               
29-392
               

               
Cow position:
               
chr15:23696987-23696633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
124, 31
               

               
Conread position:
               
32-319
               

               
Cow position:
               
chr15:12785345-12785631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
96, 139
               

               
Conread position:
               
39-306
               

               
Cow position:
               
chr15:36793572-36793298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
62, 54
               

               
Conread position:
               
42-343
               

               
Cow position:
               
chr15:39782878-39783188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 198
               

               
Conread position:
               
42-351
               

               
Cow position:
               
chr15:10512341-10512032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
190, 87
               

               
Conread position:
               
42-359
               

               
Cow position:
               
chr15:25386366-25386689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 46
               

               
Conread position:
               
43-391
               

               
Cow position:
               
chr15:16583768-16583428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
49, 85
               

               
Conread position:
               
50-392
               

               
Cow position:
               
chr15:362959-363302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
78, 46
               

               
Conread position:
               
51-277
               

               
Cow position:
               
chr15:14176566-14176334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 192
               

               
Conread position:
               
51-346
               

               
Cow position:
               
chr15:915905-915612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
77, 37
               

               
Conread position:
               
59-360
               

               
Cow position:
               
chr15:45272943-45273254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
64-354
               

               
Cow position:
               
chr15:26573327-26573617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
64, 48
               

               
Conread position:
               
64-392
               

               
Cow position:
               
chr15:24941415-24941102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
66-348
               

               
Cow position:
               
chr15:20422828-20422543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
52, 27
               

               
Conread position:
               
66-363
               

               
Cow position:
               
chr15:10737795-10737498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
30, 168
               

               
Conread position:
               
69-369
               

               
Cow position:
               
chr15:13554306-13554611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
70-363
               

               
Cow position:
               
chr15:22871567-22871857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 108
               

               
Conread position:
               
70-392
               

               
Cow position:
               
chr15:33976742-33976409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
62, 262
               

               
Conread position:
               
70-431
               

               
Cow position:
               
chr15:39316889-39316515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 212
               

               
Conread position:
               
71-360
               

               
Cow position:
               
chr15:41000115-40999821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
58, 25
               

               
Conread position:
               
76-343
               

               
Cow position:
               
chr15:9106993-9107267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
77-360
               

               
Cow position:
               
chr15:44640872-44641144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
98, 16
               

               
Conread position:
               
77-388
               

               
Cow position:
               
chr15:50302144-50302464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
52, 74
               

               
Conread position:
               
77-393
               

               
Cow position:
               
chr15:22095100-22095406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
49, 22
               

               
Conread position:
               
78-392
               

               
Cow position:
               
chr15:29604739-29604433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 154
               

               
Conread position:
               
80-324
               

               
Cow position:
               
chr15:692505-692251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
48, 10
               

               
Conread position:
               
83-317
               

               
Cow position:
               
chr15:35205186-35204943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
46, 22
               

               
Conread position:
               
89-329
               

               
Cow position:
               
chr15:9781443-9781683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 88
               

               
Conread position:
               
89-349
               

               
Cow position:
               
chr15:12870892-12870627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
40, 149
               

               
Conread position:
               
89-402
               

               
Cow position:
               
chr15:21389191-21388871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
40, 7
               

               
Conread position:
               
90-392
               

               
Cow position:
               
chr15:34207214-34206913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 87
               

               
Conread position:
               
95-392
               

               
Cow position:
               
chr15:15573857-15573536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
34, 136
               

               
Conread position:
               
100-346
               

               
Cow position:
               
chr15:43599172-43599418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
27, 85
               

               
Conread position:
               
100-355
               

               
Cow position:
               
chr15:37205031-37205287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 135
               

               
Conread position:
               
101-319
               

               
Cow position:
               
chr15:28258473-28258248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
101-363
               

               
Cow position:
               
chr15:16307406-16307663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 139
               

               
Conread position:
               
101-363
               

               
Cow position:
               
chr15:20351816-20352080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
28, 134
               

               
Conread position:
               
102-392
               

               
Cow position:
               
chr15:47843266-47842974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 211
               

               
Conread position:
               
103-393
               

               
Cow position:
               
chr15:26404269-26404554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 72
               

               
Conread position:
               
126-391
               

               
Cow position:
               
chr15:23768246-23767982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 107
               

               
Conread position:
               
137-353
               

               
Cow position:
               
chr15:9526453-9526232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
137-368
               

               
Cow position:
               
chr15:12655891-12655656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 143
               

               
Conread position:
               
137-392
               

               
Cow position:
               
chr15:23568102-23567841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
95, 132
               

               
Conread position:
               
137-393
               

               
Cow position:
               
chr15:30810232-30809976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
24, 17
               

               
Conread position:
               
140-392
               

               
Cow position:
               
chr15:27280899-27281148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
132, 72
               

               
Conread position:
               
148-363
               

               
Cow position:
               
chr15:38877268-38877056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
86, 121
               

               
Conread position:
               
149-319
               

               
Cow position:
               
chr15:16448720-16448893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
149-370
               

               
Cow position:
               
chr15:16904667-16904885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
118, 68
               

               
Conread position:
               
163-373
               

               
Cow position:
               
chr15:41620140-41619927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
104, 206
               

               
Conread position:
               
170-378
               

               
Cow position:
               
chr15:14856410-14856204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
5, 61
               

               
Conread position:
               
173-390
               

               
Cow position:
               
chr15:24045038-24044816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 97
               

               
Conread position:
               
173-393
               

               
Cow position:
               
chr15:24305421-24305193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 120
               

               
Conread position:
               
174-364
               

               
Cow position:
               
chr15:12441763-12441573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
93, 108
               

               
Conread position:
               
174-392
               

               
Cow position:
               
chr15:5632748-5632956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
96, 60
               

               
Conread position:
               
174-392
               

               
Cow position:
               
chr15:22136745-22136966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
49, 97
               

               
Conread position:
               
174-393
               

               
Cow position:
               
chr15:144163-143946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
141, 38
               

               
Conread position:
               
179-363
               

               
Cow position:
               
chr15:13387143-13387330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
38, 145
               

               
Conread position:
               
179-368
               

               
Cow position:
               
chr15:16657558-16657749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
179-389
               

               
Cow position:
               
chr15:11646425-11646207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 59
               

               
Conread position:
               
179-393
               

               
Cow position:
               
chr15:15708047-15707833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 145
               

               
Conread position:
               
181-374
               

               
Cow position:
               
chr15:6586648-6586456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 133
               

               
Conread position:
               
181-392
               

               
Cow position:
               
chr15:40009585-40009366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
55, 137
               

               
Conread position:
               
182-392
               

               
Cow position:
               
chr15:10845789-10846006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
182-394
               

               
Cow position:
               
chr15:52740056-52739835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
38, 76
               

               
Conread position:
               
184-363
               

               
Cow position:
               
chr15:23927402-23927219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
48, 164
               

               
Conread position:
               
184-392
               

               
Cow position:
               
chr15:34145082-34144871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
85, 43
               

               
Conread position:
               
188-363
               

               
Cow position:
               
chr15:16936772-16936593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 107
               

               
Conread position:
               
190-359
               

               
Cow position:
               
chr15:34140062-34140224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
43, 97
               

               
Conread position:
               
190-363
               

               
Cow position:
               
chr15:53680682-53680517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 37
               

               
Conread position:
               
190-364
               

               
Cow position:
               
chr15:13684190-13684015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
43, 134
               

               
Conread position:
               
190-366
               

               
Cow position:
               
chr15:37749273-37749095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
194-392
               

               
Cow position:
               
chr15:11363096-11362898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
9, 35
               

               
Conread position:
               
195-392
               

               
Cow position:
               
chr15:51632954-51632766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
74, 35
               

               
Conread position:
               
198-360
               

               
Cow position:
               
chr15:9871331-9871166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
38, 126
               

               
Conread position:
               
206-392
               

               
Cow position:
               
chr15:5535846-5536034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
19, 147
               

               
Conread position:
               
209-392
               

               
Cow position:
               
chr15:23791552-23791741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
214-386
               

               
Cow position:
               
chr15:43750613-43750787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
218-393
               

               
Cow position:
               
chr15:12316032-12316209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 95
               

               
Conread position:
               
220-392
               

               
Cow position:
               
chr15:39436328-39436496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
47, 95
               

               
Conread position:
               
220-392
               

               
Cow position:
               
chr15:41583019-41583194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 13
               

               
Conread position:
               
223-363
               

               
Cow position:
               
chr15:1701796-1701936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
44, 23
               

               
Conread position:
               
223-392
               

               
Cow position:
               
chr15:4350484-4350316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 46
               

               
Conread position:
               
228-392
               

               
Cow position:
               
chr15:16616315-16616478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 45
               

               
Conread position:
               
228-392
               

               
Cow position:
               
chr15:29792794-29792628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
134, 40
               

               
Conread position:
               
233-390
               

               
Cow position:
               
chr15:38846224-38846378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 34
               

               
Conread position:
               
233-392
               

               
Cow position:
               
chr15:4535031-4535191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
235-390
               

               
Cow position:
               
chr15:45322910-45323066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
116, 32
               

               
Conread position:
               
239-392
               

               
Cow position:
               
chr15:22168184-22168342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
244-392
               

               
Cow position:
               
chr15:34104402-34104550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
245-364
               

               
Cow position:
               
chr15:33303461-33303583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               
Show alignments to all cow chromosomes.