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Cow genome map

           
Conread name:
           
Lym1-jns73_D06.f
        

               
Conread position:
               
1-112
               

               
Cow position:
               
chr21:19236702-19236813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-117
               

               
Cow position:
               
chr21:49144734-49144850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-122
               

               
Cow position:
               
chr21:40821629-40821747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
1-126
               

               
Cow position:
               
chr21:18578302-18578427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-126
               

               
Cow position:
               
chr21:19825127-19825252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-136
               

               
Cow position:
               
chr21:16099294-16099433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1-136
               

               
Cow position:
               
chr21:17910989-17911126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr21:18450021-18449858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr21:28882449-28882286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
117, 94
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr21:19220529-19220698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr21:19176510-19176341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
127, 94
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr21:15305029-15305222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr21:6583874-6584078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
123, 99
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr21:31658888-31659091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
127, 68
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr21:13580681-13580449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
127, 104
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr21:12310739-12310509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
127, 58
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr21:31759960-31760182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
171, 37
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr21:46809499-46809742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
127, 8
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr21:8713691-8713944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
127, 171
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr21:10148265-10147980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
127, 94
               

               
Conread position:
               
1-282
               

               
Cow position:
               
chr21:8950459-8950162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
99, 111
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr21:8426709-8426427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 86
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr21:36695824-36696120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
127, 34
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr21:43388627-43388317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 89
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr21:17983237-17982941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
127, 22
               

               
Conread position:
               
1-317
               

               
Cow position:
               
chr21:13656368-13656682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
120, 170
               

               
Conread position:
               
1-318
               

               
Cow position:
               
chr21:48527682-48527354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 161
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr21:17890569-17890248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
127, 89
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr21:82325-81995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
127, 48
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr21:33580677-33580324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
127, 55
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr21:17559650-17560023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
88, 167
               

               
Conread position:
               
1-359
               

               
Cow position:
               
chr21:30222608-30222251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
126, 85
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr21:10070657-10071029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr21:30592048-30592399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
82, 125
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr21:9301491-9301114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
127, 89
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr21:11027092-11027452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
175, 56
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr21:12916152-12916524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
127, 234
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr21:17512040-17511680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
87, 46
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr21:19083319-19083694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
127, 111
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr21:34663885-34663527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
93, 37
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr21:40134412-40134062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
110, 77
               

               
Conread position:
               
1-363
               

               
Cow position:
               
chr21:47495390-47495754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
118, 33
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr21:38918468-38918107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
93, 164
               

               
Conread position:
               
1-373
               

               
Cow position:
               
chr21:41156137-41155753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 71
               

               
Conread position:
               
1-374
               

               
Cow position:
               
chr21:23535979-23535605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 206
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr21:20153223-20152820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 123
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr21:27229537-27229922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
106, 74
               

               
Conread position:
               
1-390
               

               
Cow position:
               
chr21:18568371-18568779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
126, 94
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr21:10264301-10263909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 242
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr21:15444816-15445210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
127, 159
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr21:15545096-15545502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
47, 242
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr21:23606933-23606543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
127, 38
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr21:24296499-24296896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
127, 117
               

               
Conread position:
               
3-318
               

               
Cow position:
               
chr21:674932-674638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
238, 70
               

               
Conread position:
               
3-344
               

               
Cow position:
               
chr21:47713744-47714086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
84, 8
               

               
Conread position:
               
3-363
               

               
Cow position:
               
chr21:17874926-17875290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 229
               

               
Conread position:
               
3-363
               

               
Cow position:
               
chr21:23587136-23586782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 64
               

               
Conread position:
               
3-390
               

               
Cow position:
               
chr21:34654334-34653952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 77
               

               
Conread position:
               
3-393
               

               
Cow position:
               
chr21:46848868-46849255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
4-112
               

               
Cow position:
               
chr21:31278451-31278343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-117
               

               
Cow position:
               
chr21:785549-785660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
4-122
               

               
Cow position:
               
chr21:34209751-34209868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
4-126
               

               
Cow position:
               
chr21:37479327-37479449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-159
               

               
Cow position:
               
chr21:26828708-26828868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
4-160
               

               
Cow position:
               
chr21:3135605-3135764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
124, 34
               

               
Conread position:
               
4-186
               

               
Cow position:
               
chr21:27744292-27744104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
67, 93
               

               
Conread position:
               
4-193
               

               
Cow position:
               
chr21:4109040-4108847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
123, 61
               

               
Conread position:
               
4-198
               

               
Cow position:
               
chr21:43316629-43316826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
124, 191
               

               
Conread position:
               
4-204
               

               
Cow position:
               
chr21:12349031-12348826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
4-210
               

               
Cow position:
               
chr21:25012341-25012137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
120, 76
               

               
Conread position:
               
4-210
               

               
Cow position:
               
chr21:40820588-40820798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
100, 67
               

               
Conread position:
               
4-215
               

               
Cow position:
               
chr21:37928914-37928699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
114, 35
               

               
Conread position:
               
4-221
               

               
Cow position:
               
chr21:13674387-13674608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
124, 32
               

               
Conread position:
               
4-228
               

               
Cow position:
               
chr21:27677746-27677519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
125, 175
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr21:26018644-26018410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr21:36682589-36682357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
4-234
               

               
Cow position:
               
chr21:40475764-40475530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
120, 188
               

               
Conread position:
               
4-236
               

               
Cow position:
               
chr21:17519291-17519048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr21:17403583-17403827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
24, 120
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr21:16794057-16793800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
126, 241
               

               
Conread position:
               
4-254
               

               
Cow position:
               
chr21:31652650-31652403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
124, 154
               

               
Conread position:
               
4-261
               

               
Cow position:
               
chr21:44074955-44074697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
124, 184
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr21:32392800-32393049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
88, 11
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr21:8430834-8431102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
120, 247
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr21:13589025-13588762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
124, 106
               

               
Conread position:
               
4-267
               

               
Cow position:
               
chr21:8545756-8546020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
12, 169
               

               
Conread position:
               
4-272
               

               
Cow position:
               
chr21:10009553-10009827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
124, 34
               

               
Conread position:
               
4-273
               

               
Cow position:
               
chr21:44724113-44724374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
124, 68
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr21:71849-71564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
124, 84
               

               
Conread position:
               
4-286
               

               
Cow position:
               
chr21:12354439-12354715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
32, 76
               

               
Conread position:
               
4-297
               

               
Cow position:
               
chr21:10656838-10657135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
115, 204
               

               
Conread position:
               
4-313
               

               
Cow position:
               
chr21:9505132-9504836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
90, 157
               

               
Conread position:
               
4-313
               

               
Cow position:
               
chr21:19059828-19060136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
118, 167
               

               
Conread position:
               
4-313
               

               
Cow position:
               
chr21:41522150-41522456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 32
               

               
Conread position:
               
4-316
               

               
Cow position:
               
chr21:28919268-28919576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
229, 63
               

               
Conread position:
               
4-323
               

               
Cow position:
               
chr21:742537-742227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
124, 74
               

               
Conread position:
               
4-324
               

               
Cow position:
               
chr21:9707004-9707332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
24, 107
               

               
Conread position:
               
4-324
               

               
Cow position:
               
chr21:18059696-18060016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
124, 250
               

               
Conread position:
               
4-329
               

               
Cow position:
               
chr21:41140452-41140782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
120, 172
               

               
Conread position:
               
4-332
               

               
Cow position:
               
chr21:22014454-22014117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
4-333
               

               
Cow position:
               
chr21:37640829-37640487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
90, 250
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr21:1511549-1511219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
124, 66
               

               
Conread position:
               
4-337
               

               
Cow position:
               
chr21:40266387-40266049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
120, 168
               

               
Conread position:
               
4-338
               

               
Cow position:
               
chr21:10743652-10743317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
123, 161
               

               
Conread position:
               
4-341
               

               
Cow position:
               
chr21:19702993-19702648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
134, 58
               

               
Conread position:
               
4-341
               

               
Cow position:
               
chr21:36910214-36909858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
4-344
               

               
Cow position:
               
chr21:44251578-44251914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
115, 31
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr21:40432727-40432368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 244
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr21:25127874-25127520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
28, 290
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr21:30255994-30256350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
88, 153
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr21:9036564-9036211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
128, 48
               

               
Conread position:
               
4-352
               

               
Cow position:
               
chr21:37480227-37479872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
124, 77
               

               
Conread position:
               
4-353
               

               
Cow position:
               
chr21:17364215-17364564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
110, 58
               

               
Conread position:
               
4-353
               

               
Cow position:
               
chr21:19067796-19067441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 214
               

               
Conread position:
               
4-353
               

               
Cow position:
               
chr21:27123862-27124213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
124, 67
               

               
Conread position:
               
4-353
               

               
Cow position:
               
chr21:40786943-40786586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
123, 154
               

               
Conread position:
               
4-354
               

               
Cow position:
               
chr21:30236579-30236906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
4-358
               

               
Cow position:
               
chr21:45906358-45906714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
124, 86
               

               
Conread position:
               
4-359
               

               
Cow position:
               
chr21:28211440-28211107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr21:6017894-6017521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr21:10817297-10816927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 114
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr21:41621391-41621029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 317
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr21:42501315-42500941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
113, 89
               

               
Conread position:
               
4-362
               

               
Cow position:
               
chr21:47363461-47363836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
70, 55
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr21:641847-641488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 82
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr21:957932-957574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 77
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr21:9477427-9477064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
124, 78
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr21:13034772-13035141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
100, 306
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr21:13047927-13048295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
123, 309
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr21:16915044-16914677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 234
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr21:18155301-18155668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 62
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr21:23979916-23980280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 235
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr21:32297245-32297605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 188
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr21:33982551-33982903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
124, 80
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr21:38449188-38449546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
6, 69
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr21:40899604-40899242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
128, 56
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr21:47761034-47760681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
123, 243
               

               
Conread position:
               
4-364
               

               
Cow position:
               
chr21:17638158-17637803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
123, 201
               

               
Conread position:
               
4-364
               

               
Cow position:
               
chr21:24343002-24343364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
107, 217
               

               
Conread position:
               
4-364
               

               
Cow position:
               
chr21:47719042-47719395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
124, 17
               

               
Conread position:
               
4-372
               

               
Cow position:
               
chr21:11739858-11740223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
124, 9
               

               
Conread position:
               
4-373
               

               
Cow position:
               
chr21:10673373-10673024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
100, 73
               

               
Conread position:
               
4-373
               

               
Cow position:
               
chr21:20262084-20262441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
88, 32
               

               
Conread position:
               
4-375
               

               
Cow position:
               
chr21:36763325-36762934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
124, 91
               

               
Conread position:
               
4-384
               

               
Cow position:
               
chr21:14452496-14452113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 34
               

               
Conread position:
               
4-384
               

               
Cow position:
               
chr21:27568896-27569284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
84, 175
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr21:32339482-32339864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 56
               

               
Conread position:
               
4-388
               

               
Cow position:
               
chr21:47861444-47861067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
132, 34
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr21:10004620-10005015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 157
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr21:28028062-28027674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
123, 188
               

               
Conread position:
               
4-390
               

               
Cow position:
               
chr21:32559108-32559483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
48, 121
               

               
Conread position:
               
4-391
               

               
Cow position:
               
chr21:33996-33591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 245
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:643583-643202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 31
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:938284-937907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
124, 71
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:3763488-3763869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
124, 31
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:4281619-4281999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 70
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:5427190-5426812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 68
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:6051768-6051375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 92
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:6713261-6713654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 68
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:6834313-6833921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 87
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:7673376-7673001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
152, 92
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:9311318-9310914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:12154388-12154004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
177, 82
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:13840591-13840191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
121, 145
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:15911641-15911269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
222, 34
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:18800267-18800660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
49, 31
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:25345127-25344746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 237
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:28244730-28244344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 68
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:33996987-33997353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
171, 45
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:37299723-37299338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
123, 37
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:37706149-37706538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
88, 94
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:39403265-39403670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
85, 132
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:41590303-41590688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 84
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:44825612-44826015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
66, 52
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:45356078-45355705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
266, 66
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:46264454-46264043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
69, 211
               

               
Conread position:
               
4-392
               

               
Cow position:
               
chr21:49699774-49700167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
120, 207
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr21:3585101-3585491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 89
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr21:13365628-13365212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
61, 193
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr21:13584789-13585192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
88, 201
               

               
Conread position:
               
5-167
               

               
Cow position:
               
chr21:6292011-6291844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
5-206
               

               
Cow position:
               
chr21:48482268-48482469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
119, 65
               

               
Conread position:
               
5-207
               

               
Cow position:
               
chr21:8506285-8506487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
123, 75
               

               
Conread position:
               
5-207
               

               
Cow position:
               
chr21:8509173-8509375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
123, 75
               

               
Conread position:
               
5-233
               

               
Cow position:
               
chr21:22851177-22850954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
123, 79
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr21:44829494-44829762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
119, 234
               

               
Conread position:
               
5-294
               

               
Cow position:
               
chr21:13842755-13842458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
5-389
               

               
Cow position:
               
chr21:11644704-11645097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
120, 85
               

               
Conread position:
               
5-390
               

               
Cow position:
               
chr21:29069061-29069458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 187
               

               
Conread position:
               
5-392
               

               
Cow position:
               
chr21:22718521-22718912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 51
               

               
Conread position:
               
5-392
               

               
Cow position:
               
chr21:28733650-28734043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
123, 22
               

               
Conread position:
               
6-235
               

               
Cow position:
               
chr21:17252716-17252948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
122, 84
               

               
Conread position:
               
6-285
               

               
Cow position:
               
chr21:18318974-18318692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
126, 117
               

               
Conread position:
               
6-316
               

               
Cow position:
               
chr21:36910998-36910688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
118, 64
               

               
Conread position:
               
6-318
               

               
Cow position:
               
chr21:5238649-5238332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
122, 55
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr21:8349583-8349256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
122, 30
               

               
Conread position:
               
6-363
               

               
Cow position:
               
chr21:48637495-48637857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
122, 10
               

               
Conread position:
               
6-374
               

               
Cow position:
               
chr21:29001886-29002266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
6-392
               

               
Cow position:
               
chr21:17184179-17183790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 61
               

               
Conread position:
               
6-392
               

               
Cow position:
               
chr21:24858577-24858180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
122, 82
               

               
Conread position:
               
7-230
               

               
Cow position:
               
chr21:24875612-24875387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 123
               

               
Conread position:
               
7-310
               

               
Cow position:
               
chr21:29014657-29014959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
117, 65
               

               
Conread position:
               
7-333
               

               
Cow position:
               
chr21:23673005-23672684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
122, 42
               

               
Conread position:
               
7-354
               

               
Cow position:
               
chr21:21686677-21686329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
8-122
               

               
Cow position:
               
chr21:11353323-11353208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
8-318
               

               
Cow position:
               
chr21:868660-868979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
73, 91
               

               
Conread position:
               
8-327
               

               
Cow position:
               
chr21:11779279-11779592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
79, 169
               

               
Conread position:
               
8-346
               

               
Cow position:
               
chr21:36756867-36756517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
120, 31
               

               
Conread position:
               
8-355
               

               
Cow position:
               
chr21:6998200-6997848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
121, 59
               

               
Conread position:
               
8-359
               

               
Cow position:
               
chr21:30231437-30231792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 249
               

               
Conread position:
               
8-360
               

               
Cow position:
               
chr21:42135360-42135715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
121, 70
               

               
Conread position:
               
8-363
               

               
Cow position:
               
chr21:14464845-14464482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
110, 227
               

               
Conread position:
               
8-363
               

               
Cow position:
               
chr21:27863260-27863614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 65
               

               
Conread position:
               
8-389
               

               
Cow position:
               
chr21:29213900-29214277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
8-390
               

               
Cow position:
               
chr21:27521083-27521458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 15
               

               
Conread position:
               
8-391
               

               
Cow position:
               
chr21:3236762-3236400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
223, 72
               

               
Conread position:
               
8-391
               

               
Cow position:
               
chr21:24598902-24598531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
181, 27
               

               
Conread position:
               
8-392
               

               
Cow position:
               
chr21:12461710-12462102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 110
               

               
Conread position:
               
8-392
               

               
Cow position:
               
chr21:38901022-38900643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
99, 80
               

               
Conread position:
               
8-393
               

               
Cow position:
               
chr21:30848689-30849072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
83, 110
               

               
Conread position:
               
9-346
               

               
Cow position:
               
chr21:16152698-16152350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
118, 76
               

               
Conread position:
               
10-196
               

               
Cow position:
               
chr21:42017343-42017534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
7, 40
               

               
Conread position:
               
10-363
               

               
Cow position:
               
chr21:47464862-47465216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
118, 89
               

               
Conread position:
               
10-366
               

               
Cow position:
               
chr21:22121759-22121421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
128, 69
               

               
Conread position:
               
10-390
               

               
Cow position:
               
chr21:10114075-10114458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
7, 73
               

               
Conread position:
               
10-390
               

               
Cow position:
               
chr21:23822409-23822038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
89, 78
               

               
Conread position:
               
10-391
               

               
Cow position:
               
chr21:30835623-30835234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 183
               

               
Conread position:
               
10-392
               

               
Cow position:
               
chr21:20160935-20160552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 29
               

               
Conread position:
               
10-393
               

               
Cow position:
               
chr21:11456547-11456942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 36
               

               
Conread position:
               
12-346
               

               
Cow position:
               
chr21:37014170-37014484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
257, 119
               

               
Conread position:
               
12-378
               

               
Cow position:
               
chr21:37789747-37790115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
115, 58
               

               
Conread position:
               
12-392
               

               
Cow position:
               
chr21:34010141-34010522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
116, 55
               

               
Conread position:
               
13-195
               

               
Cow position:
               
chr21:14746026-14745839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
13-318
               

               
Cow position:
               
chr21:16604060-16604361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
114, 255
               

               
Conread position:
               
13-363
               

               
Cow position:
               
chr21:41198143-41198505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
119, 22
               

               
Conread position:
               
14-258
               

               
Cow position:
               
chr21:19561311-19561560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
100, 235
               

               
Conread position:
               
14-373
               

               
Cow position:
               
chr21:5650151-5649798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
196, 105
               

               
Conread position:
               
14-392
               

               
Cow position:
               
chr21:17193495-17193891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 81
               

               
Conread position:
               
15-411
               

               
Cow position:
               
chr21:15584171-15584566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 23
               

               
Conread position:
               
16-354
               

               
Cow position:
               
chr21:28237448-28237803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
76, 148
               

               
Conread position:
               
16-393
               

               
Cow position:
               
chr21:14760808-14760448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
113, 33
               

               
Conread position:
               
16-398
               

               
Cow position:
               
chr21:34151827-34151443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
20-363
               

               
Cow position:
               
chr21:3360769-3361109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
98, 52
               

               
Conread position:
               
21-257
               

               
Cow position:
               
chr21:39319160-39319406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
21-359
               

               
Cow position:
               
chr21:10410469-10410125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
107, 42
               

               
Conread position:
               
21-392
               

               
Cow position:
               
chr21:22861238-22860870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
54, 76
               

               
Conread position:
               
21-392
               

               
Cow position:
               
chr21:28810029-28810395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
154, 72
               

               
Conread position:
               
23-389
               

               
Cow position:
               
chr21:10561341-10561707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
24-252
               

               
Cow position:
               
chr21:11625989-11625759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
104, 150
               

               
Conread position:
               
24-281
               

               
Cow position:
               
chr21:828967-829227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
102, 75
               

               
Conread position:
               
24-327
               

               
Cow position:
               
chr21:10292737-10292428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
62, 49
               

               
Conread position:
               
24-363
               

               
Cow position:
               
chr21:19195918-19196261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 209
               

               
Conread position:
               
24-389
               

               
Cow position:
               
chr21:46912792-46912413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
22, 177
               

               
Conread position:
               
26-343
               

               
Cow position:
               
chr21:9697837-9698164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
106, 66
               

               
Conread position:
               
27-345
               

               
Cow position:
               
chr21:10978707-10979021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
100, 19
               

               
Conread position:
               
27-363
               

               
Cow position:
               
chr21:22856460-22856120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
111, 15
               

               
Conread position:
               
27-373
               

               
Cow position:
               
chr21:10261513-10261174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
102, 113
               

               
Conread position:
               
28-317
               

               
Cow position:
               
chr21:7377684-7377982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
29-363
               

               
Cow position:
               
chr21:6624397-6624060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
88, 66
               

               
Conread position:
               
33-355
               

               
Cow position:
               
chr21:20589548-20589227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
159, 112
               

               
Conread position:
               
41-392
               

               
Cow position:
               
chr21:31691699-31691347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 31
               

               
Conread position:
               
41-403
               

               
Cow position:
               
chr21:17723242-17722883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 119
               

               
Conread position:
               
42-363
               

               
Cow position:
               
chr21:9416475-9416148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 46
               

               
Conread position:
               
42-386
               

               
Cow position:
               
chr21:13089240-13089593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
43, 95
               

               
Conread position:
               
42-389
               

               
Cow position:
               
chr21:19259041-19258698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
86, 55
               

               
Conread position:
               
42-392
               

               
Cow position:
               
chr21:29978539-29978894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
87, 35
               

               
Conread position:
               
42-392
               

               
Cow position:
               
chr21:47763892-47764244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
94, 21
               

               
Conread position:
               
48-363
               

               
Cow position:
               
chr21:8549902-8549583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
73, 134
               

               
Conread position:
               
49-363
               

               
Cow position:
               
chr21:41579973-41579653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 11
               

               
Conread position:
               
51-392
               

               
Cow position:
               
chr21:9990727-9990381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
51-392
               

               
Cow position:
               
chr21:27145772-27146123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
60, 183
               

               
Conread position:
               
51-392
               

               
Cow position:
               
chr21:45329738-45330073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
77, 21
               

               
Conread position:
               
67-286
               

               
Cow position:
               
chr21:19874152-19874374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 169
               

               
Conread position:
               
70-360
               

               
Cow position:
               
chr21:11360226-11359946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
70-363
               

               
Cow position:
               
chr21:16696575-16696270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 155
               

               
Conread position:
               
70-363
               

               
Cow position:
               
chr21:42384709-42384411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
32, 104
               

               
Conread position:
               
70-390
               

               
Cow position:
               
chr21:45473555-45473886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 165
               

               
Conread position:
               
70-392
               

               
Cow position:
               
chr21:3818408-3818085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
48, 171
               

               
Conread position:
               
70-392
               

               
Cow position:
               
chr21:10633441-10633772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
58, 109
               

               
Conread position:
               
70-392
               

               
Cow position:
               
chr21:26245114-26244800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
62, 162
               

               
Conread position:
               
70-392
               

               
Cow position:
               
chr21:33563203-33562882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
59, 89
               

               
Conread position:
               
70-392
               

               
Cow position:
               
chr21:36795803-36795472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
59, 107
               

               
Conread position:
               
70-393
               

               
Cow position:
               
chr21:5392335-5392675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
59, 253
               

               
Conread position:
               
70-393
               

               
Cow position:
               
chr21:29485178-29484851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
59, 110
               

               
Conread position:
               
70-394
               

               
Cow position:
               
chr21:13127899-13128227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
58, 110
               

               
Conread position:
               
71-360
               

               
Cow position:
               
chr21:1591746-1591455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
68, 47
               

               
Conread position:
               
71-360
               

               
Cow position:
               
chr21:7581706-7582001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 164
               

               
Conread position:
               
71-360
               

               
Cow position:
               
chr21:23321879-23322175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
61, 104
               

               
Conread position:
               
72-363
               

               
Cow position:
               
chr21:10118764-10118459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
77-332
               

               
Cow position:
               
chr21:7394568-7394314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 62
               

               
Conread position:
               
78-350
               

               
Cow position:
               
chr21:41598003-41597734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 154
               

               
Conread position:
               
78-392
               

               
Cow position:
               
chr21:4399997-4399668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
23, 137
               

               
Conread position:
               
79-374
               

               
Cow position:
               
chr21:36297685-36297381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
24, 251
               

               
Conread position:
               
81-382
               

               
Cow position:
               
chr21:15976821-15976513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
37, 212
               

               
Conread position:
               
81-393
               

               
Cow position:
               
chr21:26647827-26648139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 33
               

               
Conread position:
               
84-392
               

               
Cow position:
               
chr21:1059262-1058945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
89-381
               

               
Cow position:
               
chr21:10001256-10000959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
39, 81
               

               
Conread position:
               
89-392
               

               
Cow position:
               
chr21:396048-395744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
43, 95
               

               
Conread position:
               
89-392
               

               
Cow position:
               
chr21:45920879-45921190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 7
               

               
Conread position:
               
95-390
               

               
Cow position:
               
chr21:8235387-8235674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
23, 77
               

               
Conread position:
               
96-363
               

               
Cow position:
               
chr21:9028790-9028526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
32, 142
               

               
Conread position:
               
98-367
               

               
Cow position:
               
chr21:28955673-28955410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 69
               

               
Conread position:
               
100-372
               

               
Cow position:
               
chr21:8206940-8206665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
20, 204
               

               
Conread position:
               
100-390
               

               
Cow position:
               
chr21:37344931-37345231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
29, 109
               

               
Conread position:
               
115-391
               

               
Cow position:
               
chr21:41878624-41878345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
14, 125
               

               
Conread position:
               
136-322
               

               
Cow position:
               
chr21:37384612-37384428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
133, 94
               

               
Conread position:
               
136-363
               

               
Cow position:
               
chr21:23192380-23192612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 190
               

               
Conread position:
               
136-392
               

               
Cow position:
               
chr21:34390846-34391102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 179
               

               
Conread position:
               
137-341
               

               
Cow position:
               
chr21:46551975-46552182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 31
               

               
Conread position:
               
137-344
               

               
Cow position:
               
chr21:46141176-46140962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
137-359
               

               
Cow position:
               
chr21:36789923-36789703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
91, 160
               

               
Conread position:
               
137-394
               

               
Cow position:
               
chr21:45330479-45330741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
133, 29
               

               
Conread position:
               
140-360
               

               
Cow position:
               
chr21:5636595-5636813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
42, 98
               

               
Conread position:
               
140-363
               

               
Cow position:
               
chr21:17856669-17856449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
94, 171
               

               
Conread position:
               
145-390
               

               
Cow position:
               
chr21:23149901-23150149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
91, 57
               

               
Conread position:
               
146-360
               

               
Cow position:
               
chr21:38664758-38664543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
71, 134
               

               
Conread position:
               
146-363
               

               
Cow position:
               
chr21:13489765-13489548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
126, 210
               

               
Conread position:
               
146-392
               

               
Cow position:
               
chr21:36162840-36163094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
146-411
               

               
Cow position:
               
chr21:18844893-18845171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 178
               

               
Conread position:
               
147-373
               

               
Cow position:
               
chr21:17009099-17008873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
70, 153
               

               
Conread position:
               
147-392
               

               
Cow position:
               
chr21:19363341-19363595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 168
               

               
Conread position:
               
147-398
               

               
Cow position:
               
chr21:30606969-30607225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
85, 205
               

               
Conread position:
               
148-393
               

               
Cow position:
               
chr21:43357139-43357396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
75, 55
               

               
Conread position:
               
149-363
               

               
Cow position:
               
chr21:24607502-24607291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
71, 114
               

               
Conread position:
               
152-374
               

               
Cow position:
               
chr21:2679670-2679448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 170
               

               
Conread position:
               
158-364
               

               
Cow position:
               
chr21:10608345-10608554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
74, 88
               

               
Conread position:
               
158-392
               

               
Cow position:
               
chr21:18041740-18041974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 89
               

               
Conread position:
               
167-390
               

               
Cow position:
               
chr21:5454892-5455117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
7, 64
               

               
Conread position:
               
171-391
               

               
Cow position:
               
chr21:9873054-9872837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
173-360
               

               
Cow position:
               
chr21:39450067-39450260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
173-363
               

               
Cow position:
               
chr21:5344758-5344560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
52, 164
               

               
Conread position:
               
173-389
               

               
Cow position:
               
chr21:35569289-35569505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
174-355
               

               
Cow position:
               
chr21:24222446-24222628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 148
               

               
Conread position:
               
174-360
               

               
Cow position:
               
chr21:13738651-13738473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
119, 59
               

               
Conread position:
               
174-392
               

               
Cow position:
               
chr21:3813392-3813614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 96
               

               
Conread position:
               
174-392
               

               
Cow position:
               
chr21:10601284-10601500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
51, 119
               

               
Conread position:
               
174-392
               

               
Cow position:
               
chr21:10727368-10727149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
44, 60
               

               
Conread position:
               
174-392
               

               
Cow position:
               
chr21:39888658-39888875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
69, 61
               

               
Conread position:
               
179-363
               

               
Cow position:
               
chr21:29224774-29224960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
139, 58
               

               
Conread position:
               
179-391
               

               
Cow position:
               
chr21:13898274-13898058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
179-392
               

               
Cow position:
               
chr21:20925419-20925638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
179-392
               

               
Cow position:
               
chr21:28882222-28882011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
50, 6
               

               
Conread position:
               
179-393
               

               
Cow position:
               
chr21:20044678-20044905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
57, 99
               

               
Conread position:
               
180-364
               

               
Cow position:
               
chr21:33359950-33360136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
89, 8
               

               
Conread position:
               
180-388
               

               
Cow position:
               
chr21:18790477-18790683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
89, 24
               

               
Conread position:
               
181-392
               

               
Cow position:
               
chr21:8985636-8985418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
50, 111
               

               
Conread position:
               
184-359
               

               
Cow position:
               
chr21:2785695-2785870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 129
               

               
Conread position:
               
184-359
               

               
Cow position:
               
chr21:4568366-4568191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
52, 65
               

               
Conread position:
               
184-371
               

               
Cow position:
               
chr21:26829182-26829363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 42
               

               
Conread position:
               
184-387
               

               
Cow position:
               
chr21:7340326-7340125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
85, 61
               

               
Conread position:
               
184-392
               

               
Cow position:
               
chr21:5137406-5137621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
187-319
               

               
Cow position:
               
chr21:7391199-7391331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 50
               

               
Conread position:
               
188-392
               

               
Cow position:
               
chr21:31676576-31676367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
30, 69
               

               
Conread position:
               
190-363
               

               
Cow position:
               
chr21:28477698-28477527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 48
               

               
Conread position:
               
190-363
               

               
Cow position:
               
chr21:43240940-43240764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
77, 63
               

               
Conread position:
               
191-373
               

               
Cow position:
               
chr21:18415127-18414943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
44, 177
               

               
Conread position:
               
191-411
               

               
Cow position:
               
chr21:45867008-45866780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
26, 140
               

               
Conread position:
               
192-390
               

               
Cow position:
               
chr21:30990205-30990398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 54
               

               
Conread position:
               
195-359
               

               
Cow position:
               
chr21:31038415-31038578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 34
               

               
Conread position:
               
195-360
               

               
Cow position:
               
chr21:9979900-9980059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 50
               

               
Conread position:
               
195-363
               

               
Cow position:
               
chr21:12363113-12362945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
75, 41
               

               
Conread position:
               
195-363
               

               
Cow position:
               
chr21:23984212-23984378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
195-391
               

               
Cow position:
               
chr21:911896-912097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
37, 127
               

               
Conread position:
               
196-324
               

               
Cow position:
               
chr21:19458240-19458113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
196-360
               

               
Cow position:
               
chr21:1464299-1464133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
74, 41
               

               
Conread position:
               
201-374
               

               
Cow position:
               
chr21:42170698-42170526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
69, 28
               

               
Conread position:
               
204-374
               

               
Cow position:
               
chr21:36280066-36279895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
205-373
               

               
Cow position:
               
chr21:18495030-18494858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
30, 111
               

               
Conread position:
               
206-363
               

               
Cow position:
               
chr21:21143960-21143803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 123
               

               
Conread position:
               
213-392
               

               
Cow position:
               
chr21:40058859-40058674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
23, 110
               

               
Conread position:
               
217-392
               

               
Cow position:
               
chr21:46973085-46973257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
50, 95
               

               
Conread position:
               
222-355
               

               
Cow position:
               
chr21:17434275-17434407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 92
               

               
Conread position:
               
223-391
               

               
Cow position:
               
chr21:5985276-5985444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 7
               

               
Conread position:
               
227-392
               

               
Cow position:
               
chr21:33791328-33791499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 77
               

               
Conread position:
               
227-392
               

               
Cow position:
               
chr21:45439201-45439381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
228-373
               

               
Cow position:
               
chr21:39401631-39401487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 93
               

               
Conread position:
               
230-392
               

               
Cow position:
               
chr21:42190140-42190300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
40, 120
               

               
Conread position:
               
233-391
               

               
Cow position:
               
chr21:48484415-48484574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 120
               

               
Conread position:
               
237-392
               

               
Cow position:
               
chr21:28617617-28617456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
237-392
               

               
Cow position:
               
chr21:37361448-37361599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 111
               

               
Conread position:
               
241-393
               

               
Cow position:
               
chr21:18934943-18934790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 85
               

               
Conread position:
               
242-363
               

               
Cow position:
               
chr21:9998694-9998817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
243-392
               

               
Cow position:
               
chr21:32237317-32237166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
244-392
               

               
Cow position:
               
chr21:29979737-29979887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
72, 44
               

               
Conread position:
               
248-363
               

               
Cow position:
               
chr21:4080376-4080258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
248-381
               

               
Cow position:
               
chr21:33419706-33419837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
19, 26
               
Show alignments to all cow chromosomes.