Non-Coding RNA Search

Cow genome map


           Conread name:
           Lym1-jns73_D06.f
        

               Conread position:
               1-117
               

               Cow position:
               chr3:9000101-8999983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               1-122
               

               Cow position:
               chr3:60371162-60371042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               1-122
               

               Cow position:
               chr3:61680495-61680374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-126
               

               Cow position:
               chr3:18479118-18479243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-126
               

               Cow position:
               chr3:72626564-72626690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-126
               

               Cow position:
               chr3:79877208-79877082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               1-127
               

               Cow position:
               chr3:635356-635232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               1-136
               

               Cow position:
               chr3:43388947-43389084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               1-154
               

               Cow position:
               chr3:44218946-44218788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               1-167
               

               Cow position:
               chr3:19044590-19044756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               126, 138
               

               Conread position:
               1-167
               

               Cow position:
               chr3:56754356-56754523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               13, 91
               

               Conread position:
               1-183
               

               Cow position:
               chr3:55730288-55730475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1-193
               

               Cow position:
               chr3:25735725-25735922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               1-193
               

               Cow position:
               chr3:29234500-29234698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               85, 31
               

               Conread position:
               1-198
               

               Cow position:
               chr3:986193-985993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               116, 124
               

               Conread position:
               1-198
               

               Cow position:
               chr3:13882340-13882542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               95, 150
               

               Conread position:
               1-198
               

               Cow position:
               chr3:59947846-59947644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               1-199
               

               Cow position:
               chr3:53604566-53604768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               120, 89
               

               Conread position:
               1-199
               

               Cow position:
               chr3:76056110-76056307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               123, 71
               

               Conread position:
               1-200
               

               Cow position:
               chr3:82195662-82195463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               137, 48
               

               Conread position:
               1-225
               

               Cow position:
               chr3:49996539-49996771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-228
               

               Cow position:
               chr3:38248834-38248600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               97, 172
               

               Conread position:
               1-229
               

               Cow position:
               chr3:26337838-26338079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               1-231
               

               Cow position:
               chr3:12090855-12090619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               1-234
               

               Cow position:
               chr3:23131990-23132226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               127, 69
               

               Conread position:
               1-235
               

               Cow position:
               chr3:11281947-11281709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               127, 231
               

               Conread position:
               1-244
               

               Cow position:
               chr3:83889427-83889178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               127, 173
               

               Conread position:
               1-265
               

               Cow position:
               chr3:21866860-21867124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               127, 60
               

               Conread position:
               1-268
               

               Cow position:
               chr3:69785442-69785717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               99, 66
               

               Conread position:
               1-282
               

               Cow position:
               chr3:22165237-22165523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               127, 87
               

               Conread position:
               1-283
               

               Cow position:
               chr3:15950739-15951018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               40, 86
               

               Conread position:
               1-290
               

               Cow position:
               chr3:4268396-4268696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               129, 94
               

               Conread position:
               1-294
               

               Cow position:
               chr3:57792951-57792654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               48, 215
               

               Conread position:
               1-297
               

               Cow position:
               chr3:58527555-58527277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               128, 71
               

               Conread position:
               1-304
               

               Cow position:
               chr3:56678176-56678481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               123, 19
               

               Conread position:
               1-306
               

               Cow position:
               chr3:83787620-83787307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               127, 89
               

               Conread position:
               1-312
               

               Cow position:
               chr3:18180141-18179810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               72, 108
               

               Conread position:
               1-312
               

               Cow position:
               chr3:72342426-72342109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               1-317
               

               Cow position:
               chr3:175121-174807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               243, 41
               

               Conread position:
               1-322
               

               Cow position:
               chr3:35055798-35056125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               1-323
               

               Cow position:
               chr3:59040748-59040420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               127, 94
               

               Conread position:
               1-329
               

               Cow position:
               chr3:21112464-21112796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               124, 89
               

               Conread position:
               1-332
               

               Cow position:
               chr3:29946564-29946240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               129, 13
               

               Conread position:
               1-346
               

               Cow position:
               chr3:9662991-9663340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 241
               

               Conread position:
               1-349
               

               Cow position:
               chr3:23920248-23920601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 234
               

               Conread position:
               1-353
               

               Cow position:
               chr3:7763836-7763490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               245
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               127, 156
               

               Conread position:
               1-358
               

               Cow position:
               chr3:75853157-75853511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               128, 40
               

               Conread position:
               1-359
               

               Cow position:
               chr3:43233681-43233326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               249
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               127, 80
               

               Conread position:
               1-360
               

               Cow position:
               chr3:59719028-59718660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               127, 38
               

               Conread position:
               1-360
               

               Cow position:
               chr3:73395293-73394938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 56
               

               Conread position:
               1-360
               

               Cow position:
               chr3:83699690-83700052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               117, 89
               

               Conread position:
               1-363
               

               Cow position:
               chr3:14725494-14725116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               263
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               102, 89
               

               Conread position:
               1-363
               

               Cow position:
               chr3:17456089-17456450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 104
               

               Conread position:
               1-363
               

               Cow position:
               chr3:23734911-23735284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               120, 71
               

               Conread position:
               1-363
               

               Cow position:
               chr3:36569860-36570230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               91, 41
               

               Conread position:
               1-363
               

               Cow position:
               chr3:38828929-38828581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               249
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               137, 48
               

               Conread position:
               1-363
               

               Cow position:
               chr3:53318588-53318218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               10, 15
               

               Conread position:
               1-363
               

               Cow position:
               chr3:53910284-53909928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               251
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               127, 34
               

               Conread position:
               1-363
               

               Cow position:
               chr3:67698457-67698094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               113, 180
               

               Conread position:
               1-363
               

               Cow position:
               chr3:72474100-72473726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 94
               

               Conread position:
               1-363
               

               Cow position:
               chr3:75687259-75687624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               250
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               129, 37
               

               Conread position:
               1-363
               

               Cow position:
               chr3:80973529-80973172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               191, 182
               

               Conread position:
               1-368
               

               Cow position:
               chr3:79221031-79220660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               127, 41
               

               Conread position:
               1-373
               

               Cow position:
               chr3:70676409-70676026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               259
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               127, 113
               

               Conread position:
               1-390
               

               Cow position:
               chr3:55189572-55189967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               273
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               68, 96
               

               Conread position:
               1-390
               

               Cow position:
               chr3:78092333-78092726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               260
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               118, 79
               

               Conread position:
               1-392
               

               Cow position:
               chr3:2008456-2008051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               62, 124
               

               Conread position:
               1-392
               

               Cow position:
               chr3:18393222-18393602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               260
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               19, 94
               

               Conread position:
               1-392
               

               Cow position:
               chr3:31309176-31309573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 34
               

               Conread position:
               1-392
               

               Cow position:
               chr3:39969685-39970090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               278
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               127, 97
               

               Conread position:
               1-392
               

               Cow position:
               chr3:56476852-56476464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               274
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               122, 47
               

               Conread position:
               1-392
               

               Cow position:
               chr3:59649431-59649040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 35
               

               Conread position:
               1-395
               

               Cow position:
               chr3:31077547-31077952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               274
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               127, 26
               

               Conread position:
               1-408
               

               Cow position:
               chr3:55970693-55970271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 117
               

               Conread position:
               1-411
               

               Cow position:
               chr3:1830396-1830806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 14
               

               Conread position:
               2-117
               

               Cow position:
               chr3:75974901-75975017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               2-346
               

               Cow position:
               chr3:48810460-48810805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               5, 95
               

               Conread position:
               2-389
               

               Cow position:
               chr3:53222189-53221799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               260
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               130, 70
               

               Conread position:
               2-392
               

               Cow position:
               chr3:29813403-29813025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               188, 66
               

               Conread position:
               3-265
               

               Cow position:
               chr3:48459153-48459420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               105, 97
               

               Conread position:
               3-354
               

               Cow position:
               chr3:75050447-75050800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               124, 24
               

               Conread position:
               3-363
               

               Cow position:
               chr3:20257396-20257019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               249
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               125, 59
               

               Conread position:
               3-363
               

               Cow position:
               chr3:44932688-44932327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 75
               

               Conread position:
               3-388
               

               Cow position:
               chr3:75480174-75479798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               96, 69
               

               Conread position:
               3-392
               

               Cow position:
               chr3:2675208-2674811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 229
               

               Conread position:
               4-112
               

               Cow position:
               chr3:33331-33441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               4-122
               

               Cow position:
               chr3:76168454-76168572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-130
               

               Cow position:
               chr3:66563960-66563834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-137
               

               Cow position:
               chr3:58562876-58562741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               102, 91
               

               Conread position:
               4-141
               

               Cow position:
               chr3:37641501-37641365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               120, 89
               

               Conread position:
               4-154
               

               Cow position:
               chr3:8147348-8147493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               4-160
               

               Cow position:
               chr3:3453757-3453596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               4-160
               

               Cow position:
               chr3:55105971-55106132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               4-165
               

               Cow position:
               chr3:24220405-24220566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-167
               

               Cow position:
               chr3:62186333-62186161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               4-182
               

               Cow position:
               chr3:52845730-52845551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               124, 76
               

               Conread position:
               4-188
               

               Cow position:
               chr3:79398320-79398131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               4-192
               

               Cow position:
               chr3:59317875-59317687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               90, 68
               

               Conread position:
               4-198
               

               Cow position:
               chr3:61023846-61024044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               120, 8
               

               Conread position:
               4-199
               

               Cow position:
               chr3:12669314-12669114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               71, 166
               

               Conread position:
               4-204
               

               Cow position:
               chr3:18699933-18700139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               4-204
               

               Cow position:
               chr3:47198951-47199154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               114, 29
               

               Conread position:
               4-209
               

               Cow position:
               chr3:5703351-5703146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-210
               

               Cow position:
               chr3:35624368-35624578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               120, 109
               

               Conread position:
               4-210
               

               Cow position:
               chr3:44207702-44207917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               4-225
               

               Cow position:
               chr3:1011667-1011438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               93, 104
               

               Conread position:
               4-228
               

               Cow position:
               chr3:4071594-4071814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               124, 167
               

               Conread position:
               4-228
               

               Cow position:
               chr3:40212860-40213084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               124, 86
               

               Conread position:
               4-257
               

               Cow position:
               chr3:76270063-76269817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               127, 68
               

               Conread position:
               4-266
               

               Cow position:
               chr3:63845115-63844840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               124, 252
               

               Conread position:
               4-279
               

               Cow position:
               chr3:80733675-80733945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               123, 196
               

               Conread position:
               4-282
               

               Cow position:
               chr3:3316633-3316918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               73, 158
               

               Conread position:
               4-282
               

               Cow position:
               chr3:59605017-59604737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               124, 68
               

               Conread position:
               4-285
               

               Cow position:
               chr3:19711162-19711443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               116, 17
               

               Conread position:
               4-288
               

               Cow position:
               chr3:3656690-3656402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               106, 31
               

               Conread position:
               4-289
               

               Cow position:
               chr3:18059879-18059589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               124, 84
               

               Conread position:
               4-294
               

               Cow position:
               chr3:58317768-58318071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               4-298
               

               Cow position:
               chr3:6403596-6403300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               128, 46
               

               Conread position:
               4-299
               

               Cow position:
               chr3:45700977-45700684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               124, 67
               

               Conread position:
               4-299
               

               Cow position:
               chr3:48468351-48468060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               114, 210
               

               Conread position:
               4-303
               

               Cow position:
               chr3:58134509-58134814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               123, 93
               

               Conread position:
               4-309
               

               Cow position:
               chr3:5696554-5696862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               62, 171
               

               Conread position:
               4-314
               

               Cow position:
               chr3:30026549-30026239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               29, 222
               

               Conread position:
               4-315
               

               Cow position:
               chr3:64527021-64526710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               116, 31
               

               Conread position:
               4-316
               

               Cow position:
               chr3:17235029-17235348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               66, 146
               

               Conread position:
               4-316
               

               Cow position:
               chr3:76156161-76155846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               124, 89
               

               Conread position:
               4-319
               

               Cow position:
               chr3:1517338-1517656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               128, 67
               

               Conread position:
               4-319
               

               Cow position:
               chr3:79271534-79271865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               95, 61
               

               Conread position:
               4-320
               

               Cow position:
               chr3:15443551-15443873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 189
               

               Conread position:
               4-320
               

               Cow position:
               chr3:48900155-48900481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               227
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               125, 175
               

               Conread position:
               4-323
               

               Cow position:
               chr3:15953907-15954232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               123, 239
               

               Conread position:
               4-324
               

               Cow position:
               chr3:11199801-11200130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               4-324
               

               Cow position:
               chr3:46146554-46146879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               124, 32
               

               Conread position:
               4-327
               

               Cow position:
               chr3:22221501-22221170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               114, 68
               

               Conread position:
               4-329
               

               Cow position:
               chr3:55177576-55177904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               124, 68
               

               Conread position:
               4-329
               

               Cow position:
               chr3:70333794-70334116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 121
               

               Conread position:
               4-332
               

               Cow position:
               chr3:2648333-2648668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               124, 91
               

               Conread position:
               4-335
               

               Cow position:
               chr3:24468209-24468536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 34
               

               Conread position:
               4-335
               

               Cow position:
               chr3:34871743-34871411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               124, 270
               

               Conread position:
               4-336
               

               Cow position:
               chr3:15153863-15153534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               120, 69
               

               Conread position:
               4-337
               

               Cow position:
               chr3:19900831-19900510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               160, 211
               

               Conread position:
               4-339
               

               Cow position:
               chr3:52487804-52487473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               70, 194
               

               Conread position:
               4-340
               

               Cow position:
               chr3:17331894-17331560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               124, 54
               

               Conread position:
               4-343
               

               Cow position:
               chr3:48072711-48073039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               124, 31
               

               Conread position:
               4-345
               

               Cow position:
               chr3:26488902-26489252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               234
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               81, 45
               

               Conread position:
               4-346
               

               Cow position:
               chr3:71478767-71478423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               246
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               121, 34
               

               Conread position:
               4-347
               

               Cow position:
               chr3:69144871-69144537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               123, 210
               

               Conread position:
               4-352
               

               Cow position:
               chr3:75107947-75107620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               124, 73
               

               Conread position:
               4-353
               

               Cow position:
               chr3:53094749-53095111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               28, 207
               

               Conread position:
               4-353
               

               Cow position:
               chr3:53592511-53592872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               54, 64
               

               Conread position:
               4-353
               

               Cow position:
               chr3:60933593-60933241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               110, 93
               

               Conread position:
               4-355
               

               Cow position:
               chr3:53875587-53875936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               124, 224
               

               Conread position:
               4-355
               

               Cow position:
               chr3:62046846-62046485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               88, 215
               

               Conread position:
               4-355
               

               Cow position:
               chr3:70761948-70762300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               248
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               124, 81
               

               Conread position:
               4-358
               

               Cow position:
               chr3:8393514-8393170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               137, 23
               

               Conread position:
               4-359
               

               Cow position:
               chr3:31297982-31298337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               113, 221
               

               Conread position:
               4-359
               

               Cow position:
               chr3:54946296-54945947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               246
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               81, 26
               

               Conread position:
               4-359
               

               Cow position:
               chr3:68707847-68708185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               100, 91
               

               Conread position:
               4-359
               

               Cow position:
               chr3:76267798-76268161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 77
               

               Conread position:
               4-359
               

               Cow position:
               chr3:83491255-83490902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               120, 66
               

               Conread position:
               4-360
               

               Cow position:
               chr3:5365840-5365489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               114, 68
               

               Conread position:
               4-360
               

               Cow position:
               chr3:26739249-26739602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               247
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               118, 102
               

               Conread position:
               4-360
               

               Cow position:
               chr3:61857683-61857318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               124, 13
               

               Conread position:
               4-360
               

               Cow position:
               chr3:63316302-63315953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               240
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               4-360
               

               Cow position:
               chr3:68303493-68303150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               90, 202
               

               Conread position:
               4-360
               

               Cow position:
               chr3:79092209-79092577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               82, 251
               

               Conread position:
               4-360
               

               Cow position:
               chr3:79824744-79825098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               243
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               129, 58
               

               Conread position:
               4-363
               

               Cow position:
               chr3:2518366-2518718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               248
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               45, 70
               

               Conread position:
               4-363
               

               Cow position:
               chr3:3556723-3556364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               258
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               114, 212
               

               Conread position:
               4-363
               

               Cow position:
               chr3:9641730-9641380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               248
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               151, 86
               

               Conread position:
               4-363
               

               Cow position:
               chr3:14601537-14601898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               119, 32
               

               Conread position:
               4-363
               

               Cow position:
               chr3:15671978-15672329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               123, 216
               

               Conread position:
               4-363
               

               Cow position:
               chr3:20130112-20129757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               128, 97
               

               Conread position:
               4-363
               

               Cow position:
               chr3:20663367-20663719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               72, 146
               

               Conread position:
               4-363
               

               Cow position:
               chr3:23105190-23105551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               124, 81
               

               Conread position:
               4-363
               

               Cow position:
               chr3:23408189-23408536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               124, 35
               

               Conread position:
               4-363
               

               Cow position:
               chr3:25690975-25690604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               251
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               67, 245
               

               Conread position:
               4-363
               

               Cow position:
               chr3:32787637-32787276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               97, 62
               

               Conread position:
               4-363
               

               Cow position:
               chr3:36375363-36375729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               258
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               125, 72
               

               Conread position:
               4-363
               

               Cow position:
               chr3:38035413-38035777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 238
               

               Conread position:
               4-363
               

               Cow position:
               chr3:45667168-45667535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               253
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               124, 65
               

               Conread position:
               4-363
               

               Cow position:
               chr3:49118855-49119212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 166
               

               Conread position:
               4-363
               

               Cow position:
               chr3:49460751-49461118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               251
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               124, 48
               

               Conread position:
               4-363
               

               Cow position:
               chr3:50768854-50768497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               248
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               124, 86
               

               Conread position:
               4-363
               

               Cow position:
               chr3:54373682-54374046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 233
               

               Conread position:
               4-363
               

               Cow position:
               chr3:54903742-54903387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               110, 190
               

               Conread position:
               4-363
               

               Cow position:
               chr3:55712606-55712244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               262
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               116, 57
               

               Conread position:
               4-363
               

               Cow position:
               chr3:55734133-55733756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               39, 33
               

               Conread position:
               4-363
               

               Cow position:
               chr3:55947774-55947394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               4-363
               

               Cow position:
               chr3:56583023-56582658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               134, 120
               

               Conread position:
               4-363
               

               Cow position:
               chr3:57754300-57754665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               249
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               128, 67
               

               Conread position:
               4-363
               

               Cow position:
               chr3:59391950-59392291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               249
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               312, 120
               

               Conread position:
               4-363
               

               Cow position:
               chr3:65969349-65968973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               256
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               4-363
               

               Cow position:
               chr3:67929084-67929449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               123, 63
               

               Conread position:
               4-363
               

               Cow position:
               chr3:68880956-68881297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               100, 91
               

               Conread position:
               4-363
               

               Cow position:
               chr3:70609800-70609441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               219, 47
               

               Conread position:
               4-363
               

               Cow position:
               chr3:75080927-75080585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               124, 49
               

               Conread position:
               4-363
               

               Cow position:
               chr3:80072318-80071941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               251
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               88, 45
               

               Conread position:
               4-364
               

               Cow position:
               chr3:83797648-83798025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               254
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               4-365
               

               Cow position:
               chr3:55819924-55819560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 74
               

               Conread position:
               4-366
               

               Cow position:
               chr3:11253990-11254351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               120, 190
               

               Conread position:
               4-366
               

               Cow position:
               chr3:19199162-19198799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               251
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               121, 41
               

               Conread position:
               4-368
               

               Cow position:
               chr3:18687076-18686717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               124, 79
               

               Conread position:
               4-369
               

               Cow position:
               chr3:76138634-76138285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               256
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               258, 106
               

               Conread position:
               4-373
               

               Cow position:
               chr3:13301673-13302046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 61
               

               Conread position:
               4-373
               

               Cow position:
               chr3:45211479-45211101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               124, 258
               

               Conread position:
               4-373
               

               Cow position:
               chr3:67520001-67520370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               265
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               39, 34
               

               Conread position:
               4-374
               

               Cow position:
               chr3:5044635-5045001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               110, 218
               

               Conread position:
               4-374
               

               Cow position:
               chr3:11063537-11063187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               250
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               18, 7
               

               Conread position:
               4-375
               

               Cow position:
               chr3:13890658-13890271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               27, 378
               

               Conread position:
               4-378
               

               Cow position:
               chr3:51578149-51578520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 71
               

               Conread position:
               4-381
               

               Cow position:
               chr3:55318723-55319105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 91
               

               Conread position:
               4-389
               

               Cow position:
               chr3:76713137-76713537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               67, 354
               

               Conread position:
               4-390
               

               Cow position:
               chr3:2392794-2393182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 68
               

               Conread position:
               4-390
               

               Cow position:
               chr3:17936672-17937055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               259
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               230, 91
               

               Conread position:
               4-390
               

               Cow position:
               chr3:26066162-26065785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               270
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               37, 70
               

               Conread position:
               4-390
               

               Cow position:
               chr3:39661279-39661666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               123, 170
               

               Conread position:
               4-390
               

               Cow position:
               chr3:74754490-74754113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               114, 76
               

               Conread position:
               4-390
               

               Cow position:
               chr3:75570271-75570659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               4-390
               

               Cow position:
               chr3:81087466-81087826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               125, 13
               

               Conread position:
               4-391
               

               Cow position:
               chr3:80740728-80740355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               135, 31
               

               Conread position:
               4-391
               

               Cow position:
               chr3:83454982-83455369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               256
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               124, 25
               

               Conread position:
               4-392
               

               Cow position:
               chr3:189050-188641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               8, 15
               

               Conread position:
               4-392
               

               Cow position:
               chr3:210497-210105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 351
               

               Conread position:
               4-392
               

               Cow position:
               chr3:2506301-2506699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 224
               

               Conread position:
               4-392
               

               Cow position:
               chr3:3985492-3985112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               272
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               6, 72
               

               Conread position:
               4-392
               

               Cow position:
               chr3:5374484-5374115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               264
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               335, 38
               

               Conread position:
               4-392
               

               Cow position:
               chr3:14553047-14552660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 80
               

               Conread position:
               4-392
               

               Cow position:
               chr3:15159204-15158823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               124, 15
               

               Conread position:
               4-392
               

               Cow position:
               chr3:17694827-17695223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               271
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               110, 178
               

               Conread position:
               4-392
               

               Cow position:
               chr3:17957636-17957248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 119
               

               Conread position:
               4-392
               

               Cow position:
               chr3:18459362-18459738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               264
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               124, 31
               

               Conread position:
               4-392
               

               Cow position:
               chr3:27274702-27274315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 68
               

               Conread position:
               4-392
               

               Cow position:
               chr3:28908041-28908413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               255
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               263, 89
               

               Conread position:
               4-392
               

               Cow position:
               chr3:29596570-29596176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               267
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               82, 35
               

               Conread position:
               4-392
               

               Cow position:
               chr3:30180258-30179865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 69
               

               Conread position:
               4-392
               

               Cow position:
               chr3:31419870-31419483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               110, 212
               

               Conread position:
               4-392
               

               Cow position:
               chr3:32585328-32584940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               246
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               124, 237
               

               Conread position:
               4-392
               

               Cow position:
               chr3:45882074-45881691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 68
               

               Conread position:
               4-392
               

               Cow position:
               chr3:52651905-52652292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               121, 89
               

               Conread position:
               4-392
               

               Cow position:
               chr3:53384105-53384501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               273
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               124, 63
               

               Conread position:
               4-392
               

               Cow position:
               chr3:53790367-53790759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               117, 45
               

               Conread position:
               4-392
               

               Cow position:
               chr3:54049854-54050237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               257
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               110, 93
               

               Conread position:
               4-392
               

               Cow position:
               chr3:54781818-54782229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               275
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               69, 276
               

               Conread position:
               4-392
               

               Cow position:
               chr3:59474295-59473894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               116, 65
               

               Conread position:
               4-392
               

               Cow position:
               chr3:65058874-65058482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 85
               

               Conread position:
               4-392
               

               Cow position:
               chr3:67929995-67930395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               279
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               74, 189
               

               Conread position:
               4-392
               

               Cow position:
               chr3:71231573-71231188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 93
               

               Conread position:
               4-392
               

               Cow position:
               chr3:78945646-78946055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               6, 200
               

               Conread position:
               4-392
               

               Cow position:
               chr3:83474929-83474529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               273
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               88, 185
               

               Conread position:
               4-393
               

               Cow position:
               chr3:525501-525135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               227, 30
               

               Conread position:
               4-393
               

               Cow position:
               chr3:16752079-16752472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               82, 167
               

               Conread position:
               4-393
               

               Cow position:
               chr3:59610544-59610943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               279
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               124, 63
               

               Conread position:
               4-394
               

               Cow position:
               chr3:14801919-14801531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               264
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               124, 31
               

               Conread position:
               4-394
               

               Cow position:
               chr3:77365117-77365513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               124, 26
               

               Conread position:
               4-399
               

               Cow position:
               chr3:2025378-2024958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               285
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               4-411
               

               Cow position:
               chr3:48253054-48252651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               286
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               125, 71
               

               Conread position:
               4-411
               

               Cow position:
               chr3:48363244-48362840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               287
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               124, 82
               

               Conread position:
               5-219
               

               Cow position:
               chr3:15973744-15973524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               5-219
               

               Cow position:
               chr3:39996720-39996933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               123, 9
               

               Conread position:
               5-325
               

               Cow position:
               chr3:3883646-3883966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               126, 73
               

               Conread position:
               5-334
               

               Cow position:
               chr3:50615091-50615424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               95, 10
               

               Conread position:
               5-354
               

               Cow position:
               chr3:35153780-35153445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               228, 67
               

               Conread position:
               5-363
               

               Cow position:
               chr3:12705373-12705731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               123, 67
               

               Conread position:
               5-363
               

               Cow position:
               chr3:49328108-49327756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 49
               

               Conread position:
               5-363
               

               Cow position:
               chr3:68156901-68156556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               76, 33
               

               Conread position:
               5-390
               

               Cow position:
               chr3:4319893-4319494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 238
               

               Conread position:
               5-392
               

               Cow position:
               chr3:16333979-16333588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               263
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               9, 232
               

               Conread position:
               5-392
               

               Cow position:
               chr3:65413092-65413494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               272
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               28, 322
               

               Conread position:
               5-392
               

               Cow position:
               chr3:74234355-74233977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               123, 24
               

               Conread position:
               5-393
               

               Cow position:
               chr3:20802466-20802849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               178, 113
               

               Conread position:
               6-283
               

               Cow position:
               chr3:83988707-83988425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               98, 29
               

               Conread position:
               6-317
               

               Cow position:
               chr3:78093220-78093524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               123, 33
               

               Conread position:
               6-336
               

               Cow position:
               chr3:77582279-77581950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               227
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               123, 65
               

               Conread position:
               6-355
               

               Cow position:
               chr3:76922500-76922840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               35, 72
               

               Conread position:
               6-360
               

               Cow position:
               chr3:59597346-59597003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               122, 66
               

               Conread position:
               6-363
               

               Cow position:
               chr3:54506879-54506522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               122, 92
               

               Conread position:
               6-363
               

               Cow position:
               chr3:64280765-64281117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               246
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               100, 111
               

               Conread position:
               6-363
               

               Cow position:
               chr3:65237196-65236838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               122, 66
               

               Conread position:
               6-387
               

               Cow position:
               chr3:14465542-14465921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               122, 29
               

               Conread position:
               6-390
               

               Cow position:
               chr3:53271007-53270610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               6-391
               

               Cow position:
               chr3:3032582-3032177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               278
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               101, 71
               

               Conread position:
               6-392
               

               Cow position:
               chr3:71238322-71237938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               270
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               122, 9
               

               Conread position:
               6-392
               

               Cow position:
               chr3:77188613-77188224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               260
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               122, 90
               

               Conread position:
               6-393
               

               Cow position:
               chr3:10958071-10958448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               119, 30
               

               Conread position:
               7-126
               

               Cow position:
               chr3:42933655-42933536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-263
               

               Cow position:
               chr3:64196997-64196738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               121, 65
               

               Conread position:
               7-282
               

               Cow position:
               chr3:59945299-59945020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               125, 241
               

               Conread position:
               7-319
               

               Cow position:
               chr3:21014784-21015102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               223
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               112, 31
               

               Conread position:
               7-356
               

               Cow position:
               chr3:59035215-59034858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               120, 343
               

               Conread position:
               7-363
               

               Cow position:
               chr3:45279641-45279279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               96, 245
               

               Conread position:
               7-367
               

               Cow position:
               chr3:46541679-46542016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               262, 39
               

               Conread position:
               7-382
               

               Cow position:
               chr3:68587191-68586819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 66
               

               Conread position:
               7-389
               

               Cow position:
               chr3:30463004-30463381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 41
               

               Conread position:
               7-390
               

               Cow position:
               chr3:23168896-23169286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               121, 28
               

               Conread position:
               8-199
               

               Cow position:
               chr3:65308282-65308476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               8-210
               

               Cow position:
               chr3:44960116-44959909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               111, 164
               

               Conread position:
               8-240
               

               Cow position:
               chr3:54067965-54067735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               119, 27
               

               Conread position:
               8-265
               

               Cow position:
               chr3:31349938-31350193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               120, 8
               

               Conread position:
               8-269
               

               Cow position:
               chr3:14547170-14546909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               110, 88
               

               Conread position:
               8-315
               

               Cow position:
               chr3:17058376-17058678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               121, 90
               

               Conread position:
               8-319
               

               Cow position:
               chr3:3889406-3889709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               116, 64
               

               Conread position:
               8-346
               

               Cow position:
               chr3:54100542-54100891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               69, 238
               

               Conread position:
               8-349
               

               Cow position:
               chr3:24615671-24616008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               65, 30
               

               Conread position:
               8-353
               

               Cow position:
               chr3:54435139-54434800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               136, 85
               

               Conread position:
               8-360
               

               Cow position:
               chr3:74088006-74088352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               242
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               106, 150
               

               Conread position:
               8-363
               

               Cow position:
               chr3:23471292-23471649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               121, 61
               

               Conread position:
               8-364
               

               Cow position:
               chr3:46005844-46006213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               18, 13
               

               Conread position:
               8-373
               

               Cow position:
               chr3:35915890-35915508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               249
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               109, 30
               

               Conread position:
               8-381
               

               Cow position:
               chr3:18067301-18066932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 28
               

               Conread position:
               8-389
               

               Cow position:
               chr3:15051781-15052160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 80
               

               Conread position:
               8-389
               

               Cow position:
               chr3:26904270-26903900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               268
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               121, 62
               

               Conread position:
               8-390
               

               Cow position:
               chr3:26970982-26970609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               266
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               120, 22
               

               Conread position:
               8-390
               

               Cow position:
               chr3:49482543-49482925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 30
               

               Conread position:
               8-390
               

               Cow position:
               chr3:53150504-53150111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               120, 68
               

               Conread position:
               8-392
               

               Cow position:
               chr3:8061291-8060914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               120, 33
               

               Conread position:
               8-392
               

               Cow position:
               chr3:60597708-60597330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               274
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               106, 66
               

               Conread position:
               8-392
               

               Cow position:
               chr3:68145684-68146054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 31
               

               Conread position:
               8-392
               

               Cow position:
               chr3:70896210-70895828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               36, 44
               

               Conread position:
               8-392
               

               Cow position:
               chr3:71496958-71497363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               279
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               68, 293
               

               Conread position:
               8-392
               

               Cow position:
               chr3:73764044-73764414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               268
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               258, 78
               

               Conread position:
               8-392
               

               Cow position:
               chr3:75158526-75158147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 27
               

               Conread position:
               8-418
               

               Cow position:
               chr3:83215440-83215013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 406
               

               Conread position:
               9-256
               

               Cow position:
               chr3:10668709-10668958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               110, 70
               

               Conread position:
               9-311
               

               Cow position:
               chr3:7662027-7661718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               95, 165
               

               Conread position:
               9-319
               

               Cow position:
               chr3:71238646-71238331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               18, 138
               

               Conread position:
               9-363
               

               Cow position:
               chr3:7337617-7337955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               53, 26
               

               Conread position:
               9-363
               

               Cow position:
               chr3:63269404-63269040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               41, 325
               

               Conread position:
               9-390
               

               Cow position:
               chr3:55124115-55124494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               260
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               110, 27
               

               Conread position:
               9-392
               

               Cow position:
               chr3:7678835-7678453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               259
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               59, 147
               

               Conread position:
               9-392
               

               Cow position:
               chr3:63180034-63179650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               39, 29
               

               Conread position:
               10-167
               

               Cow position:
               chr3:67942364-67942526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               10-198
               

               Cow position:
               chr3:77171487-77171296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               118, 173
               

               Conread position:
               10-216
               

               Cow position:
               chr3:70756470-70756680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               114, 192
               

               Conread position:
               10-280
               

               Cow position:
               chr3:75238630-75238354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               7, 165
               

               Conread position:
               10-285
               

               Cow position:
               chr3:65019684-65019974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 238
               

               Conread position:
               10-349
               

               Cow position:
               chr3:49679303-49678954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               118, 82
               

               Conread position:
               10-363
               

               Cow position:
               chr3:29891237-29891599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               243
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               118, 240
               

               Conread position:
               10-392
               

               Cow position:
               chr3:58540348-58540751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               75, 150
               

               Conread position:
               11-341
               

               Cow position:
               chr3:12978447-12978780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               117, 84
               

               Conread position:
               11-390
               

               Cow position:
               chr3:51233936-51234312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 61
               

               Conread position:
               12-390
               

               Cow position:
               chr3:38864285-38863901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               71, 105
               

               Conread position:
               12-392
               

               Cow position:
               chr3:17221966-17222362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               263
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               64, 270
               

               Conread position:
               13-160
               

               Cow position:
               chr3:62370223-62370072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               115, 146
               

               Conread position:
               13-317
               

               Cow position:
               chr3:1889940-1890252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               111, 161
               

               Conread position:
               13-322
               

               Cow position:
               chr3:47417405-47417711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               115, 83
               

               Conread position:
               13-392
               

               Cow position:
               chr3:73961528-73961897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               119, 276
               

               Conread position:
               14-363
               

               Cow position:
               chr3:55434496-55434146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               242
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               107, 189
               

               Conread position:
               15-277
               

               Cow position:
               chr3:51609020-51609286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               113, 87
               

               Conread position:
               15-392
               

               Cow position:
               chr3:57577860-57577476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               263
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               114, 34
               

               Conread position:
               15-392
               

               Cow position:
               chr3:59000599-59000964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 58
               

               Conread position:
               16-259
               

               Cow position:
               chr3:40145630-40145385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               112, 198
               

               Conread position:
               16-392
               

               Cow position:
               chr3:2036467-2036080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               261
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               92, 220
               

               Conread position:
               16-392
               

               Cow position:
               chr3:53046495-53046875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 159
               

               Conread position:
               16-393
               

               Cow position:
               chr3:66900564-66900961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 13
               

               Conread position:
               17-363
               

               Cow position:
               chr3:74119268-74119627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               111, 21
               

               Conread position:
               20-390
               

               Cow position:
               chr3:70334533-70334918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               262
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               98, 215
               

               Conread position:
               21-264
               

               Cow position:
               chr3:23203071-23203322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               21-293
               

               Cow position:
               chr3:11640894-11640612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               21-327
               

               Cow position:
               chr3:79196921-79196610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               55, 74
               

               Conread position:
               21-363
               

               Cow position:
               chr3:45647824-45647495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               17, 68
               

               Conread position:
               21-363
               

               Cow position:
               chr3:74079480-74079824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               107, 59
               

               Conread position:
               21-363
               

               Cow position:
               chr3:78443409-78443744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               107, 162
               

               Conread position:
               21-392
               

               Cow position:
               chr3:7566263-7566637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               269
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               103, 51
               

               Conread position:
               21-392
               

               Cow position:
               chr3:11987486-11987112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 55
               

               Conread position:
               21-392
               

               Cow position:
               chr3:16656327-16656699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               74, 148
               

               Conread position:
               21-392
               

               Cow position:
               chr3:48241765-48241403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 14
               

               Conread position:
               22-265
               

               Cow position:
               chr3:84250392-84250632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               107, 50
               

               Conread position:
               23-390
               

               Cow position:
               chr3:68627531-68627891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               105, 70
               

               Conread position:
               24-363
               

               Cow position:
               chr3:15388374-15388030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               243
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               104, 11
               

               Conread position:
               24-363
               

               Cow position:
               chr3:69416623-69416969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               237
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               27-353
               

               Cow position:
               chr3:18185229-18184895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               66, 220
               

               Conread position:
               27-353
               

               Cow position:
               chr3:83727097-83727422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               87, 70
               

               Conread position:
               27-363
               

               Cow position:
               chr3:74620841-74621178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               190, 57
               

               Conread position:
               28-360
               

               Cow position:
               chr3:52608332-52608005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               238
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               100, 57
               

               Conread position:
               29-353
               

               Cow position:
               chr3:25945245-25944906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               85, 27
               

               Conread position:
               31-392
               

               Cow position:
               chr3:23877148-23876780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               97, 22
               

               Conread position:
               31-392
               

               Cow position:
               chr3:74134855-74134487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               56, 29
               

               Conread position:
               33-375
               

               Cow position:
               chr3:44102113-44101773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               243
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               95, 48
               

               Conread position:
               34-319
               

               Cow position:
               chr3:73820217-73820512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               210
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               55, 183
               

               Conread position:
               38-391
               

               Cow position:
               chr3:30055308-30055663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               82, 189
               

               Conread position:
               38-392
               

               Cow position:
               chr3:53572608-53572968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               234
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               89, 189
               

               Conread position:
               38-392
               

               Cow position:
               chr3:80565104-80564742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               90, 10
               

               Conread position:
               39-392
               

               Cow position:
               chr3:72391228-72390862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               259
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               57, 199
               

               Conread position:
               42-392
               

               Cow position:
               chr3:6690140-6689776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               71, 50
               

               Conread position:
               51-349
               

               Cow position:
               chr3:53739066-53739357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               216, 65
               

               Conread position:
               51-392
               

               Cow position:
               chr3:12711783-12712141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               51-392
               

               Cow position:
               chr3:28898091-28898441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               239
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               43, 188
               

               Conread position:
               57-382
               

               Cow position:
               chr3:82461298-82460973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               74, 30
               

               Conread position:
               61-363
               

               Cow position:
               chr3:49790687-49790993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               31, 160
               

               Conread position:
               63-363
               

               Cow position:
               chr3:72168611-72168902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               65, 46
               

               Conread position:
               67-364
               

               Cow position:
               chr3:20677729-20678021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               62, 21
               

               Conread position:
               69-309
               

               Cow position:
               chr3:22510136-22509894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               59, 26
               

               Conread position:
               70-310
               

               Cow position:
               chr3:84175712-84175959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               59, 26
               

               Conread position:
               70-389
               

               Cow position:
               chr3:81470988-81471316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               58, 27
               

               Conread position:
               70-390
               

               Cow position:
               chr3:49383060-49382736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               58, 26
               

               Conread position:
               70-392
               

               Cow position:
               chr3:15752526-15752846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               58, 18
               

               Conread position:
               70-392
               

               Cow position:
               chr3:52863071-52863403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               233
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               48, 43
               

               Conread position:
               71-360
               

               Cow position:
               chr3:2680624-2680334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               57, 108
               

               Conread position:
               71-363
               

               Cow position:
               chr3:15506560-15506266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               22, 90
               

               Conread position:
               71-373
               

               Cow position:
               chr3:57760609-57760304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               57, 161
               

               Conread position:
               74-323
               

               Cow position:
               chr3:43727179-43726931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               38, 58
               

               Conread position:
               75-392
               

               Cow position:
               chr3:27940036-27940346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               54, 99
               

               Conread position:
               76-390
               

               Cow position:
               chr3:67704652-67704324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               52, 247
               

               Conread position:
               77-294
               

               Cow position:
               chr3:72503791-72504016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               77-359
               

               Cow position:
               chr3:46901303-46901015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               52, 156
               

               Conread position:
               77-363
               

               Cow position:
               chr3:67543765-67544054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               51, 19
               

               Conread position:
               78-346
               

               Cow position:
               chr3:24935468-24935203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 42
               

               Conread position:
               78-363
               

               Cow position:
               chr3:55835716-55836010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               24, 246
               

               Conread position:
               78-375
               

               Cow position:
               chr3:59883964-59884269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               14, 275
               

               Conread position:
               78-391
               

               Cow position:
               chr3:80053440-80053751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               226
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               50, 18
               

               Conread position:
               79-390
               

               Cow position:
               chr3:56059914-56059591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               49, 175
               

               Conread position:
               80-392
               

               Cow position:
               chr3:79292929-79292616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               49, 16
               

               Conread position:
               81-363
               

               Cow position:
               chr3:53113276-53112988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               47, 240
               

               Conread position:
               81-390
               

               Cow position:
               chr3:5100671-5100977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               47, 151
               

               Conread position:
               81-392
               

               Cow position:
               chr3:14626049-14626370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               48, 176
               

               Conread position:
               81-392
               

               Cow position:
               chr3:57624565-57624249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               48, 157
               

               Conread position:
               82-359
               

               Cow position:
               chr3:116290-116016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               43, 151
               

               Conread position:
               82-392
               

               Cow position:
               chr3:38691308-38691624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               47, 7
               

               Conread position:
               82-392
               

               Cow position:
               chr3:70401996-70401684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               47, 89
               

               Conread position:
               86-363
               

               Cow position:
               chr3:26960492-26960776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               42, 89
               

               Conread position:
               89-386
               

               Cow position:
               chr3:4050286-4049986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               40, 111
               

               Conread position:
               96-345
               

               Cow position:
               chr3:30222277-30222018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               100-368
               

               Cow position:
               chr3:34669651-34669918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               29, 101
               

               Conread position:
               101-363
               

               Cow position:
               chr3:49650469-49650199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               101-393
               

               Cow position:
               chr3:55085088-55085403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               102-363
               

               Cow position:
               chr3:66883864-66884126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               26, 77
               

               Conread position:
               102-392
               

               Cow position:
               chr3:83815708-83816011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               38, 230
               

               Conread position:
               103-390
               

               Cow position:
               chr3:58968824-58969112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               25, 131
               

               Conread position:
               136-360
               

               Cow position:
               chr3:11712006-11711774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               39, 32
               

               Conread position:
               137-352
               

               Cow position:
               chr3:26920948-26920732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               38, 29
               

               Conread position:
               137-363
               

               Cow position:
               chr3:75711346-75711126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 52
               

               Conread position:
               137-372
               

               Cow position:
               chr3:79270917-79271154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               12, 106
               

               Conread position:
               137-390
               

               Cow position:
               chr3:31046912-31047166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               133, 26
               

               Conread position:
               137-392
               

               Cow position:
               chr3:5097247-5096986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               190
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               140-361
               

               Cow position:
               chr3:81359070-81359297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               129, 90
               

               Conread position:
               140-397
               

               Cow position:
               chr3:33698768-33698497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               86, 107
               

               Conread position:
               141-392
               

               Cow position:
               chr3:23444852-23445108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               84, 133
               

               Conread position:
               146-363
               

               Cow position:
               chr3:79591860-79592070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               121, 58
               

               Conread position:
               146-391
               

               Cow position:
               chr3:61171477-61171727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               168, 83
               

               Conread position:
               147-363
               

               Cow position:
               chr3:70632051-70631833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               40, 122
               

               Conread position:
               147-392
               

               Cow position:
               chr3:34937874-34937622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               85, 27
               

               Conread position:
               156-361
               

               Cow position:
               chr3:22089256-22089462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               156-373
               

               Cow position:
               chr3:75727562-75727779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               46, 24
               

               Conread position:
               173-391
               

               Cow position:
               chr3:16362731-16362955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               173-392
               

               Cow position:
               chr3:45313054-45312835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               56, 32
               

               Conread position:
               174-390
               

               Cow position:
               chr3:80581665-80581455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               95, 55
               

               Conread position:
               174-392
               

               Cow position:
               chr3:8147664-8147883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               174-392
               

               Cow position:
               chr3:19708101-19708320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               96, 56
               

               Conread position:
               174-392
               

               Cow position:
               chr3:66292173-66292397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               64, 83
               

               Conread position:
               174-392
               

               Cow position:
               chr3:84000616-84000394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               95, 55
               

               Conread position:
               174-393
               

               Cow position:
               chr3:39328403-39328181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               52, 174
               

               Conread position:
               174-393
               

               Cow position:
               chr3:55106436-55106662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               96, 55
               

               Conread position:
               174-393
               

               Cow position:
               chr3:65800595-65800374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               64, 80
               

               Conread position:
               178-373
               

               Cow position:
               chr3:42483907-42483706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               57, 194
               

               Conread position:
               178-392
               

               Cow position:
               chr3:66609843-66610056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               89, 137
               

               Conread position:
               179-363
               

               Cow position:
               chr3:15859668-15859852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               52, 119
               

               Conread position:
               179-363
               

               Cow position:
               chr3:73759518-73759701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               75, 56
               

               Conread position:
               179-363
               

               Cow position:
               chr3:83201527-83201709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               179-373
               

               Cow position:
               chr3:7940555-7940750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 137
               

               Conread position:
               179-392
               

               Cow position:
               chr3:4031972-4031750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               55, 145
               

               Conread position:
               179-392
               

               Cow position:
               chr3:59515102-59514893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               179-393
               

               Cow position:
               chr3:9843585-9843364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               72, 90
               

               Conread position:
               180-392
               

               Cow position:
               chr3:27544338-27544547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               87, 7
               

               Conread position:
               181-392
               

               Cow position:
               chr3:28692431-28692648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               12, 81
               

               Conread position:
               184-355
               

               Cow position:
               chr3:59271536-59271364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               43, 131
               

               Conread position:
               184-363
               

               Cow position:
               chr3:21050844-21051025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               45, 50
               

               Conread position:
               184-363
               

               Cow position:
               chr3:63860896-63861082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               184-386
               

               Cow position:
               chr3:59885386-59885174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 208
               

               Conread position:
               184-392
               

               Cow position:
               chr3:3164502-3164714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               86, 49
               

               Conread position:
               184-392
               

               Cow position:
               chr3:43528243-43528455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               46, 117
               

               Conread position:
               184-399
               

               Cow position:
               chr3:61024308-61024522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               45, 146
               

               Conread position:
               187-363
               

               Cow position:
               chr3:78201258-78201086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               187-384
               

               Cow position:
               chr3:44534769-44534977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               189-392
               

               Cow position:
               chr3:47284824-47284619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               132, 77
               

               Conread position:
               190-359
               

               Cow position:
               chr3:25060067-25059896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               190-363
               

               Cow position:
               chr3:11020105-11019935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               81, 46
               

               Conread position:
               190-392
               

               Cow position:
               chr3:30358646-30358852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               190-393
               

               Cow position:
               chr3:3062555-3062341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               42, 155
               

               Conread position:
               191-363
               

               Cow position:
               chr3:14598935-14598765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               79, 39
               

               Conread position:
               192-373
               

               Cow position:
               chr3:57553863-57554042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               41, 122
               

               Conread position:
               194-363
               

               Cow position:
               chr3:7408471-7408302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               76, 36
               

               Conread position:
               195-363
               

               Cow position:
               chr3:27212346-27212177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               34, 122
               

               Conread position:
               195-401
               

               Cow position:
               chr3:73926145-73926350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               125, 177
               

               Conread position:
               196-392
               

               Cow position:
               chr3:17952639-17952438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               196-392
               

               Cow position:
               chr3:41328424-41328237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               73, 38
               

               Conread position:
               200-392
               

               Cow position:
               chr3:49455215-49455017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               70, 30
               

               Conread position:
               204-388
               

               Cow position:
               chr3:22820545-22820355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               28, 121
               

               Conread position:
               205-392
               

               Cow position:
               chr3:29807439-29807244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               15, 111
               

               Conread position:
               206-359
               

               Cow position:
               chr3:65381121-65380972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               206-392
               

               Cow position:
               chr3:42178130-42177940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               61, 142
               

               Conread position:
               209-387
               

               Cow position:
               chr3:80922546-80922355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               216-358
               

               Cow position:
               chr3:45743700-45743556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 118
               

               Conread position:
               219-392
               

               Cow position:
               chr3:76015246-76015081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               50, 16
               

               Conread position:
               222-346
               

               Cow position:
               chr3:78739811-78739688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               45, 84
               

               Conread position:
               222-392
               

               Cow position:
               chr3:41367030-41367202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               45, 85
               

               Conread position:
               222-392
               

               Cow position:
               chr3:48296665-48296491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               46, 91
               

               Conread position:
               222-392
               

               Cow position:
               chr3:80081867-80082036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               45, 93
               

               Conread position:
               229-392
               

               Cow position:
               chr3:15661751-15661918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               40, 124
               

               Conread position:
               230-393
               

               Cow position:
               chr3:6853557-6853720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               39, 117
               

               Conread position:
               231-392
               

               Cow position:
               chr3:4087217-4087384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               232-390
               

               Cow position:
               chr3:75535054-75534896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               130, 36
               

               Conread position:
               234-359
               

               Cow position:
               chr3:16891242-16891117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               37, 66
               

               Conread position:
               234-363
               

               Cow position:
               chr3:79208054-79208184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               35, 48
               

               Conread position:
               234-390
               

               Cow position:
               chr3:82359986-82359829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               114, 58
               

               Conread position:
               234-392
               

               Cow position:
               chr3:20437708-20437864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               35, 57
               

               Conread position:
               237-389
               

               Cow position:
               chr3:2483387-2483238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 113
               

               Conread position:
               237-390
               

               Cow position:
               chr3:4861624-4861473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               123, 24
               

               Conread position:
               237-390
               

               Cow position:
               chr3:42367561-42367715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               133, 29
               

               Conread position:
               237-392
               

               Cow position:
               chr3:22872106-22872270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               237-392
               

               Cow position:
               chr3:59208755-59208596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               32, 84
               

               Conread position:
               238-387
               

               Cow position:
               chr3:48578771-48578626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               112, 19
               

               Conread position:
               242-389
               

               Cow position:
               chr3:49140106-49140251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               27, 79
               

               Conread position:
               242-391
               

               Cow position:
               chr3:23265358-23265512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               243-363
               

               Cow position:
               chr3:83921132-83921017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 43
               

               Conread position:
               244-360
               

               Cow position:
               chr3:8717186-8717067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               245-382
               

               Cow position:
               chr3:56704611-56704748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               24, 69
               

               Conread position:
               245-393
               

               Cow position:
               chr3:23270031-23269883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               22, 121
               

               Conread position:
               246-380
               

               Cow position:
               chr3:61361338-61361201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               250-392
               

               Cow position:
               chr3:18855023-18854875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               290-392
               

               Cow position:
               chr3:84368485-84368588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               27, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-117
Cow position:	chr3:9000101-8999983 (view UCSC Genome Browser custom track)
Alignm length:	119
Alignm identity:	93
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	80, 0
Conread position:	1-122
Cow position:	chr3:60371162-60371042 (view UCSC Genome Browser custom track)
Alignm length:	122
Alignm identity:	96
Alignm E-value:	6e-23
Alignm gaps (pig, cow):	45, 0
Conread position:	1-126
Cow position:	chr3:18479118-18479243 (view UCSC Genome Browser custom track)
Alignm length:	126
Alignm identity:	98
Alignm E-value:	6e-24
Alignm gaps (pig, cow):	0, 0
Conread position:	1-127
Cow position:	chr3:635356-635232 (view UCSC Genome Browser custom track)
Alignm length:	127
Alignm identity:	99
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	37, 0
Conread position:	1-136
Cow position:	chr3:43388947-43389084 (view UCSC Genome Browser custom track)
Alignm length:	138
Alignm identity:	107
Alignm E-value:	7e-25
Alignm gaps (pig, cow):	127, 0
Conread position:	1-154
Cow position:	chr3:44218946-44218788 (view UCSC Genome Browser custom track)
Alignm length:	159
Alignm identity:	115
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	124, 0
Conread position:	1-167
Cow position:	chr3:19044590-19044756 (view UCSC Genome Browser custom track)
Alignm length:	169
Alignm identity:	122
Alignm E-value:	6e-23
Alignm gaps (pig, cow):	126, 138
Conread position:	1-183
Cow position:	chr3:55730288-55730475 (view UCSC Genome Browser custom track)
Alignm length:	188
Alignm identity:	137
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	123, 0
Conread position:	1-193
Cow position:	chr3:25735725-25735922 (view UCSC Genome Browser custom track)
Alignm length:	198
Alignm identity:	137
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	126, 0
Conread position:	1-198
Cow position:	chr3:986193-985993 (view UCSC Genome Browser custom track)
Alignm length:	202
Alignm identity:	137
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	116, 124
Conread position:	1-199
Cow position:	chr3:53604566-53604768 (view UCSC Genome Browser custom track)
Alignm length:	204
Alignm identity:	141
Alignm E-value:	6e-23
Alignm gaps (pig, cow):	120, 89
Conread position:	1-200
Cow position:	chr3:82195662-82195463 (view UCSC Genome Browser custom track)
Alignm length:	203
Alignm identity:	139
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	137, 48
Conread position:	1-225
Cow position:	chr3:49996539-49996771 (view UCSC Genome Browser custom track)
Alignm length:	233
Alignm identity:	165
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	93, 0
Conread position:	1-228
Cow position:	chr3:38248834-38248600 (view UCSC Genome Browser custom track)
Alignm length:	236
Alignm identity:	159
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	97, 172
Conread position:	1-229
Cow position:	chr3:26337838-26338079 (view UCSC Genome Browser custom track)
Alignm length:	242
Alignm identity:	164
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	48, 0
Conread position:	1-231
Cow position:	chr3:12090855-12090619 (view UCSC Genome Browser custom track)
Alignm length:	237
Alignm identity:	162
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	99, 0
Conread position:	1-234
Cow position:	chr3:23131990-23132226 (view UCSC Genome Browser custom track)
Alignm length:	239
Alignm identity:	165
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	127, 69
Conread position:	1-235
Cow position:	chr3:11281947-11281709 (view UCSC Genome Browser custom track)
Alignm length:	240
Alignm identity:	173
Alignm E-value:	2e-36
Alignm gaps (pig, cow):	127, 231
Conread position:	1-244
Cow position:	chr3:83889427-83889178 (view UCSC Genome Browser custom track)
Alignm length:	251
Alignm identity:	164
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	127, 173
Conread position:	1-265
Cow position:	chr3:21866860-21867124 (view UCSC Genome Browser custom track)
Alignm length:	271
Alignm identity:	192
Alignm E-value:	7e-35
Alignm gaps (pig, cow):	127, 60