Cow genome map

Conread name: Lym1-jns73_D06.f

Conread position: 1-117
Cow position: chr3:9000101-8999983 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 1-122
Cow position: chr3:60371162-60371042 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 1-122
Cow position: chr3:61680495-61680374 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-126
Cow position: chr3:18479118-18479243 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 1-126
Cow position: chr3:72626564-72626690 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 1-126
Cow position: chr3:79877208-79877082 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 1-127
Cow position: chr3:635356-635232 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 1-136
Cow position: chr3:43388947-43389084 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 1-154
Cow position: chr3:44218946-44218788 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 1-167
Cow position: chr3:19044590-19044756 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 126, 138

Conread position: 1-167
Cow position: chr3:56754356-56754523 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 91

Conread position: 1-183
Cow position: chr3:55730288-55730475 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 123, 0

Conread position: 1-193
Cow position: chr3:25735725-25735922 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 1-193
Cow position: chr3:29234500-29234698 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 31

Conread position: 1-198
Cow position: chr3:986193-985993 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 116, 124

Conread position: 1-198
Cow position: chr3:13882340-13882542 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 95, 150

Conread position: 1-198
Cow position: chr3:59947846-59947644 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 1-199
Cow position: chr3:53604566-53604768 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 120, 89

Conread position: 1-199
Cow position: chr3:76056110-76056307 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 123, 71

Conread position: 1-200
Cow position: chr3:82195662-82195463 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 137, 48

Conread position: 1-225
Cow position: chr3:49996539-49996771 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 1-228
Cow position: chr3:38248834-38248600 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 97, 172

Conread position: 1-229
Cow position: chr3:26337838-26338079 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 1-231
Cow position: chr3:12090855-12090619 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 99, 0

Conread position: 1-234
Cow position: chr3:23131990-23132226 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 127, 69

Conread position: 1-235
Cow position: chr3:11281947-11281709 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 127, 231

Conread position: 1-244
Cow position: chr3:83889427-83889178 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 164
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 127, 173

Conread position: 1-265
Cow position: chr3:21866860-21867124 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 192
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 127, 60

Conread position: 1-268
Cow position: chr3:69785442-69785717 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 188
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 99, 66

Conread position: 1-282
Cow position: chr3:22165237-22165523 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 127, 87

Conread position: 1-283
Cow position: chr3:15950739-15951018 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 40, 86

Conread position: 1-290
Cow position: chr3:4268396-4268696 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 202
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 129, 94

Conread position: 1-294
Cow position: chr3:57792951-57792654 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 202
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 215

Conread position: 1-297
Cow position: chr3:58527555-58527277 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 128, 71

Conread position: 1-304
Cow position: chr3:56678176-56678481 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 123, 19

Conread position: 1-306
Cow position: chr3:83787620-83787307 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 209
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 127, 89

Conread position: 1-312
Cow position: chr3:18180141-18179810 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 220
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 72, 108

Conread position: 1-312
Cow position: chr3:72342426-72342109 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 0

Conread position: 1-317
Cow position: chr3:175121-174807 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 243, 41

Conread position: 1-322
Cow position: chr3:35055798-35056125 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 231
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 20, 27

Conread position: 1-323
Cow position: chr3:59040748-59040420 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 227
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 127, 94

Conread position: 1-329
Cow position: chr3:21112464-21112796 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 225
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 124, 89

Conread position: 1-332
Cow position: chr3:29946564-29946240 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 226
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 129, 13

Conread position: 1-346
Cow position: chr3:9662991-9663340 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 241

Conread position: 1-349
Cow position: chr3:23920248-23920601 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 234

Conread position: 1-353
Cow position: chr3:7763836-7763490 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 245
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 127, 156

Conread position: 1-358
Cow position: chr3:75853157-75853511 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 247
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 128, 40

Conread position: 1-359
Cow position: chr3:43233681-43233326 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 249
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 127, 80

Conread position: 1-360
Cow position: chr3:59719028-59718660 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 255
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 127, 38

Conread position: 1-360
Cow position: chr3:73395293-73394938 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 56

Conread position: 1-360
Cow position: chr3:83699690-83700052 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 234
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 117, 89

Conread position: 1-363
Cow position: chr3:14725494-14725116 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 263
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 102, 89

Conread position: 1-363
Cow position: chr3:17456089-17456450 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 104

Conread position: 1-363
Cow position: chr3:23734911-23735284 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 254
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 120, 71

Conread position: 1-363
Cow position: chr3:36569860-36570230 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 252
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 91, 41

Conread position: 1-363
Cow position: chr3:38828929-38828581 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 249
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 137, 48

Conread position: 1-363
Cow position: chr3:53318588-53318218 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 261
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 15

Conread position: 1-363
Cow position: chr3:53910284-53909928 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 251
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 127, 34

Conread position: 1-363
Cow position: chr3:67698457-67698094 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 240
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 113, 180

Conread position: 1-363
Cow position: chr3:72474100-72473726 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 94

Conread position: 1-363
Cow position: chr3:75687259-75687624 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 250
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 129, 37

Conread position: 1-363
Cow position: chr3:80973529-80973172 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 243
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 191, 182

Conread position: 1-368
Cow position: chr3:79221031-79220660 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 249
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 127, 41

Conread position: 1-373
Cow position: chr3:70676409-70676026 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 259
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 127, 113

Conread position: 1-390
Cow position: chr3:55189572-55189967 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 273
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 68, 96

Conread position: 1-390
Cow position: chr3:78092333-78092726 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 260
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 118, 79

Conread position: 1-392
Cow position: chr3:2008456-2008051 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 266
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 62, 124

Conread position: 1-392
Cow position: chr3:18393222-18393602 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 260
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 19, 94

Conread position: 1-392
Cow position: chr3:31309176-31309573 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 34

Conread position: 1-392
Cow position: chr3:39969685-39970090 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 278
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 127, 97

Conread position: 1-392
Cow position: chr3:56476852-56476464 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 274
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 122, 47

Conread position: 1-392
Cow position: chr3:59649431-59649040 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 35

Conread position: 1-395
Cow position: chr3:31077547-31077952 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 274
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 127, 26

Conread position: 1-408
Cow position: chr3:55970693-55970271 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 117

Conread position: 1-411
Cow position: chr3:1830396-1830806 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 14

Conread position: 2-117
Cow position: chr3:75974901-75975017 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 2-346
Cow position: chr3:48810460-48810805 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 239
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 5, 95

Conread position: 2-389
Cow position: chr3:53222189-53221799 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 260
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 130, 70

Conread position: 2-392
Cow position: chr3:29813403-29813025 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 270
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 188, 66

Conread position: 3-265
Cow position: chr3:48459153-48459420 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 180
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 105, 97

Conread position: 3-354
Cow position: chr3:75050447-75050800 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 249
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 124, 24

Conread position: 3-363
Cow position: chr3:20257396-20257019 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 249
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 125, 59

Conread position: 3-363
Cow position: chr3:44932688-44932327 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 75

Conread position: 3-388
Cow position: chr3:75480174-75479798 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 269
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 96, 69

Conread position: 3-392
Cow position: chr3:2675208-2674811 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 229

Conread position: 4-112
Cow position: chr3:33331-33441 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 4-122
Cow position: chr3:76168454-76168572 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 4-130
Cow position: chr3:66563960-66563834 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 4-137
Cow position: chr3:58562876-58562741 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 102, 91

Conread position: 4-141
Cow position: chr3:37641501-37641365 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 120, 89

Conread position: 4-154
Cow position: chr3:8147348-8147493 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 4-160
Cow position: chr3:3453757-3453596 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 4-160
Cow position: chr3:55105971-55106132 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 124, 0

Conread position: 4-165
Cow position: chr3:24220405-24220566 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 4-167
Cow position: chr3:62186333-62186161 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 4-182
Cow position: chr3:52845730-52845551 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 124, 76

Conread position: 4-188
Cow position: chr3:79398320-79398131 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 4-192
Cow position: chr3:59317875-59317687 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 68

Conread position: 4-198
Cow position: chr3:61023846-61024044 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 120, 8

Conread position: 4-199
Cow position: chr3:12669314-12669114 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 166

Conread position: 4-204
Cow position: chr3:18699933-18700139 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 120, 0

Conread position: 4-204
Cow position: chr3:47198951-47199154 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 114, 29

Conread position: 4-209
Cow position: chr3:5703351-5703146 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 139
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 4-210
Cow position: chr3:35624368-35624578 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 120, 109

Conread position: 4-210
Cow position: chr3:44207702-44207917 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 124, 0

Conread position: 4-225
Cow position: chr3:1011667-1011438 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 93, 104

Conread position: 4-228
Cow position: chr3:4071594-4071814 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 124, 167

Conread position: 4-228
Cow position: chr3:40212860-40213084 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 124, 86

Conread position: 4-257
Cow position: chr3:76270063-76269817 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 127, 68

Conread position: 4-266
Cow position: chr3:63845115-63844840 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 124, 252

Conread position: 4-279
Cow position: chr3:80733675-80733945 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 186
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 196

Conread position: 4-282
Cow position: chr3:3316633-3316918 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 205
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 73, 158

Conread position: 4-282
Cow position: chr3:59605017-59604737 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 207
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 124, 68

Conread position: 4-285
Cow position: chr3:19711162-19711443 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 192
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 116, 17

Conread position: 4-288
Cow position: chr3:3656690-3656402 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 206
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 106, 31

Conread position: 4-289
Cow position: chr3:18059879-18059589 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 124, 84

Conread position: 4-294
Cow position: chr3:58317768-58318071 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 205
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 95, 0

Conread position: 4-298
Cow position: chr3:6403596-6403300 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 191
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 128, 46

Conread position: 4-299
Cow position: chr3:45700977-45700684 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 198
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 124, 67

Conread position: 4-299
Cow position: chr3:48468351-48468060 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 205
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 114, 210

Conread position: 4-303
Cow position: chr3:58134509-58134814 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 199
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 123, 93

Conread position: 4-309
Cow position: chr3:5696554-5696862 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 215
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 62, 171

Conread position: 4-314
Cow position: chr3:30026549-30026239 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 212
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 29, 222

Conread position: 4-315
Cow position: chr3:64527021-64526710 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 206
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 116, 31

Conread position: 4-316
Cow position: chr3:17235029-17235348 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 215
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 66, 146

Conread position: 4-316
Cow position: chr3:76156161-76155846 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 210
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 124, 89

Conread position: 4-319
Cow position: chr3:1517338-1517656 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 128, 67

Conread position: 4-319
Cow position: chr3:79271534-79271865 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 222
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 95, 61

Conread position: 4-320
Cow position: chr3:15443551-15443873 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 189

Conread position: 4-320
Cow position: chr3:48900155-48900481 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 125, 175

Conread position: 4-323
Cow position: chr3:15953907-15954232 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 221
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 123, 239

Conread position: 4-324
Cow position: chr3:11199801-11200130 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 218
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 128, 0

Conread position: 4-324
Cow position: chr3:46146554-46146879 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 225
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 124, 32

Conread position: 4-327
Cow position: chr3:22221501-22221170 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 233
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 114, 68

Conread position: 4-329
Cow position: chr3:55177576-55177904 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 235
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 124, 68

Conread position: 4-329
Cow position: chr3:70333794-70334116 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 121

Conread position: 4-332
Cow position: chr3:2648333-2648668 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 230
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 124, 91

Conread position: 4-335
Cow position: chr3:24468209-24468536 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 34

Conread position: 4-335
Cow position: chr3:34871743-34871411 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 224
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 124, 270

Conread position: 4-336
Cow position: chr3:15153863-15153534 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 236
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 120, 69

Conread position: 4-337
Cow position: chr3:19900831-19900510 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 224
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 160, 211

Conread position: 4-339
Cow position: chr3:52487804-52487473 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 243
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 194

Conread position: 4-340
Cow position: chr3:17331894-17331560 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 231
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 124, 54

Conread position: 4-343
Cow position: chr3:48072711-48073039 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 223
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 124, 31

Conread position: 4-345
Cow position: chr3:26488902-26489252 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 234
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 81, 45

Conread position: 4-346
Cow position: chr3:71478767-71478423 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 246
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 121, 34

Conread position: 4-347
Cow position: chr3:69144871-69144537 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 237
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 123, 210

Conread position: 4-352
Cow position: chr3:75107947-75107620 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 237
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 124, 73

Conread position: 4-353
Cow position: chr3:53094749-53095111 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 239
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 28, 207

Conread position: 4-353
Cow position: chr3:53592511-53592872 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 244
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 54, 64

Conread position: 4-353
Cow position: chr3:60933593-60933241 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 245
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 110, 93

Conread position: 4-355
Cow position: chr3:53875587-53875936 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 234
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 124, 224

Conread position: 4-355
Cow position: chr3:62046846-62046485 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 240
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 88, 215

Conread position: 4-355
Cow position: chr3:70761948-70762300 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 124, 81

Conread position: 4-358
Cow position: chr3:8393514-8393170 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 240
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 137, 23

Conread position: 4-359
Cow position: chr3:31297982-31298337 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 253
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 113, 221

Conread position: 4-359
Cow position: chr3:54946296-54945947 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 246
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 81, 26

Conread position: 4-359
Cow position: chr3:68707847-68708185 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 100, 91

Conread position: 4-359
Cow position: chr3:76267798-76268161 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 77

Conread position: 4-359
Cow position: chr3:83491255-83490902 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 120, 66

Conread position: 4-360
Cow position: chr3:5365840-5365489 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 114, 68

Conread position: 4-360
Cow position: chr3:26739249-26739602 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 247
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 118, 102

Conread position: 4-360
Cow position: chr3:61857683-61857318 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 243
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 124, 13

Conread position: 4-360
Cow position: chr3:63316302-63315953 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 240
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 86, 0

Conread position: 4-360
Cow position: chr3:68303493-68303150 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 248
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 90, 202

Conread position: 4-360
Cow position: chr3:79092209-79092577 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 239
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 82, 251

Conread position: 4-360
Cow position: chr3:79824744-79825098 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 243
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 129, 58

Conread position: 4-363
Cow position: chr3:2518366-2518718 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 248
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 45, 70

Conread position: 4-363
Cow position: chr3:3556723-3556364 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 258
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 114, 212

Conread position: 4-363
Cow position: chr3:9641730-9641380 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 151, 86

Conread position: 4-363
Cow position: chr3:14601537-14601898 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 119, 32

Conread position: 4-363
Cow position: chr3:15671978-15672329 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 235
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 123, 216

Conread position: 4-363
Cow position: chr3:20130112-20129757 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 241
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 128, 97

Conread position: 4-363
Cow position: chr3:20663367-20663719 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 238
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 72, 146

Conread position: 4-363
Cow position: chr3:23105190-23105551 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 244
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 124, 81

Conread position: 4-363
Cow position: chr3:23408189-23408536 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 251
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 124, 35

Conread position: 4-363
Cow position: chr3:25690975-25690604 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 251
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 67, 245

Conread position: 4-363
Cow position: chr3:32787637-32787276 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 245
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 97, 62

Conread position: 4-363
Cow position: chr3:36375363-36375729 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 258
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 125, 72

Conread position: 4-363
Cow position: chr3:38035413-38035777 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 238

Conread position: 4-363
Cow position: chr3:45667168-45667535 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 253
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 124, 65

Conread position: 4-363
Cow position: chr3:49118855-49119212 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 166

Conread position: 4-363
Cow position: chr3:49460751-49461118 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 251
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 124, 48

Conread position: 4-363
Cow position: chr3:50768854-50768497 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 248
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 124, 86

Conread position: 4-363
Cow position: chr3:54373682-54374046 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 233

Conread position: 4-363
Cow position: chr3:54903742-54903387 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 241
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 110, 190

Conread position: 4-363
Cow position: chr3:55712606-55712244 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 262
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 116, 57

Conread position: 4-363
Cow position: chr3:55734133-55733756 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 263
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 39, 33

Conread position: 4-363
Cow position: chr3:55947774-55947394 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 246
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 4-363
Cow position: chr3:56583023-56582658 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 249
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 134, 120

Conread position: 4-363
Cow position: chr3:57754300-57754665 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 249
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 128, 67

Conread position: 4-363
Cow position: chr3:59391950-59392291 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 312, 120

Conread position: 4-363
Cow position: chr3:65969349-65968973 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 256
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 66, 0

Conread position: 4-363
Cow position: chr3:67929084-67929449 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 241
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 123, 63

Conread position: 4-363
Cow position: chr3:68880956-68881297 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 100, 91

Conread position: 4-363
Cow position: chr3:70609800-70609441 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 247
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 219, 47

Conread position: 4-363
Cow position: chr3:75080927-75080585 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 245
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 124, 49

Conread position: 4-363
Cow position: chr3:80072318-80071941 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 251
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 88, 45

Conread position: 4-364
Cow position: chr3:83797648-83798025 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 254
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 110, 0

Conread position: 4-365
Cow position: chr3:55819924-55819560 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 74

Conread position: 4-366
Cow position: chr3:11253990-11254351 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 251
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 120, 190

Conread position: 4-366
Cow position: chr3:19199162-19198799 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 251
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 121, 41

Conread position: 4-368
Cow position: chr3:18687076-18686717 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 248
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 124, 79

Conread position: 4-369
Cow position: chr3:76138634-76138285 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 256
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 258, 106

Conread position: 4-373
Cow position: chr3:13301673-13302046 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 61

Conread position: 4-373
Cow position: chr3:45211479-45211101 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 261
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 124, 258

Conread position: 4-373
Cow position: chr3:67520001-67520370 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 265
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 39, 34

Conread position: 4-374
Cow position: chr3:5044635-5045001 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 247
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 110, 218

Conread position: 4-374
Cow position: chr3:11063537-11063187 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 250
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 18, 7

Conread position: 4-375
Cow position: chr3:13890658-13890271 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 252
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 27, 378

Conread position: 4-378
Cow position: chr3:51578149-51578520 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 71

Conread position: 4-381
Cow position: chr3:55318723-55319105 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 91

Conread position: 4-389
Cow position: chr3:76713137-76713537 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 266
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 67, 354

Conread position: 4-390
Cow position: chr3:2392794-2393182 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 68

Conread position: 4-390
Cow position: chr3:17936672-17937055 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 259
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 230, 91

Conread position: 4-390
Cow position: chr3:26066162-26065785 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 270
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 37, 70

Conread position: 4-390
Cow position: chr3:39661279-39661666 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 267
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 123, 170

Conread position: 4-390
Cow position: chr3:74754490-74754113 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 252
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 114, 76

Conread position: 4-390
Cow position: chr3:75570271-75570659 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 269
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 79, 54

Conread position: 4-390
Cow position: chr3:81087466-81087826 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 267
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 125, 13

Conread position: 4-391
Cow position: chr3:80740728-80740355 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 254
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 135, 31

Conread position: 4-391
Cow position: chr3:83454982-83455369 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 256
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 124, 25

Conread position: 4-392
Cow position: chr3:189050-188641 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 271
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 8, 15

Conread position: 4-392
Cow position: chr3:210497-210105 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 351

Conread position: 4-392
Cow position: chr3:2506301-2506699 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 224

Conread position: 4-392
Cow position: chr3:3985492-3985112 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 272
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 6, 72

Conread position: 4-392
Cow position: chr3:5374484-5374115 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 264
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 335, 38

Conread position: 4-392
Cow position: chr3:14553047-14552660 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 80

Conread position: 4-392
Cow position: chr3:15159204-15158823 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 260
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 124, 15

Conread position: 4-392
Cow position: chr3:17694827-17695223 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 271
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 110, 178

Conread position: 4-392
Cow position: chr3:17957636-17957248 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 119

Conread position: 4-392
Cow position: chr3:18459362-18459738 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 264
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 124, 31

Conread position: 4-392
Cow position: chr3:27274702-27274315 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 68

Conread position: 4-392
Cow position: chr3:28908041-28908413 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 255
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 263, 89

Conread position: 4-392
Cow position: chr3:29596570-29596176 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 267
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 82, 35

Conread position: 4-392
Cow position: chr3:30180258-30179865 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 69

Conread position: 4-392
Cow position: chr3:31419870-31419483 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 261
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 110, 212

Conread position: 4-392
Cow position: chr3:32585328-32584940 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 246
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 124, 237

Conread position: 4-392
Cow position: chr3:45882074-45881691 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 68

Conread position: 4-392
Cow position: chr3:52651905-52652292 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 265
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 121, 89

Conread position: 4-392
Cow position: chr3:53384105-53384501 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 273
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 124, 63

Conread position: 4-392
Cow position: chr3:53790367-53790759 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 273
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 117, 45

Conread position: 4-392
Cow position: chr3:54049854-54050237 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 257
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 110, 93

Conread position: 4-392
Cow position: chr3:54781818-54782229 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 275
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 69, 276

Conread position: 4-392
Cow position: chr3:59474295-59473894 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 266
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 116, 65

Conread position: 4-392
Cow position: chr3:65058874-65058482 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 85

Conread position: 4-392
Cow position: chr3:67929995-67930395 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 279
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 74, 189

Conread position: 4-392
Cow position: chr3:71231573-71231188 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 93

Conread position: 4-392
Cow position: chr3:78945646-78946055 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 280
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 6, 200

Conread position: 4-392
Cow position: chr3:83474929-83474529 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 273
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 88, 185

Conread position: 4-393
Cow position: chr3:525501-525135 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 258
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 227, 30

Conread position: 4-393
Cow position: chr3:16752079-16752472 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 261
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 82, 167

Conread position: 4-393
Cow position: chr3:59610544-59610943 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 279
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 124, 63

Conread position: 4-394
Cow position: chr3:14801919-14801531 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 264
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 124, 31

Conread position: 4-394
Cow position: chr3:77365117-77365513 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 270
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 124, 26

Conread position: 4-399
Cow position: chr3:2025378-2024958 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 285
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 90, 0

Conread position: 4-411
Cow position: chr3:48253054-48252651 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 286
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 125, 71

Conread position: 4-411
Cow position: chr3:48363244-48362840 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 287
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 124, 82

Conread position: 5-219
Cow position: chr3:15973744-15973524 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 89, 0

Conread position: 5-219
Cow position: chr3:39996720-39996933 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 158
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 123, 9

Conread position: 5-325
Cow position: chr3:3883646-3883966 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 221
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 126, 73

Conread position: 5-334
Cow position: chr3:50615091-50615424 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 233
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 95, 10

Conread position: 5-354
Cow position: chr3:35153780-35153445 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 225
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 228, 67

Conread position: 5-363
Cow position: chr3:12705373-12705731 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 240
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 123, 67

Conread position: 5-363
Cow position: chr3:49328108-49327756 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 238
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 49

Conread position: 5-363
Cow position: chr3:68156901-68156556 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 250
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 76, 33

Conread position: 5-390
Cow position: chr3:4319893-4319494 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 238

Conread position: 5-392
Cow position: chr3:16333979-16333588 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 263
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 9, 232

Conread position: 5-392
Cow position: chr3:65413092-65413494 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 272
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 28, 322

Conread position: 5-392
Cow position: chr3:74234355-74233977 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 268
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 123, 24

Conread position: 5-393
Cow position: chr3:20802466-20802849 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 268
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 178, 113

Conread position: 6-283
Cow position: chr3:83988707-83988425 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 98, 29

Conread position: 6-317
Cow position: chr3:78093220-78093524 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 213
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 123, 33

Conread position: 6-336
Cow position: chr3:77582279-77581950 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 227
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 123, 65

Conread position: 6-355
Cow position: chr3:76922500-76922840 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 244
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 35, 72

Conread position: 6-360
Cow position: chr3:59597346-59597003 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 247
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 122, 66

Conread position: 6-363
Cow position: chr3:54506879-54506522 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 244
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 122, 92

Conread position: 6-363
Cow position: chr3:64280765-64281117 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 246
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 100, 111

Conread position: 6-363
Cow position: chr3:65237196-65236838 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 230
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 122, 66

Conread position: 6-387
Cow position: chr3:14465542-14465921 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 267
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 122, 29

Conread position: 6-390
Cow position: chr3:53271007-53270610 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 6-391
Cow position: chr3:3032582-3032177 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 278
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 101, 71

Conread position: 6-392
Cow position: chr3:71238322-71237938 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 270
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 122, 9

Conread position: 6-392
Cow position: chr3:77188613-77188224 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 260
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 122, 90

Conread position: 6-393
Cow position: chr3:10958071-10958448 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 263
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 119, 30

Conread position: 7-126
Cow position: chr3:42933655-42933536 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 7-263
Cow position: chr3:64196997-64196738 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 121, 65

Conread position: 7-282
Cow position: chr3:59945299-59945020 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 185
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 125, 241

Conread position: 7-319
Cow position: chr3:21014784-21015102 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 223
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 112, 31

Conread position: 7-356
Cow position: chr3:59035215-59034858 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 242
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 120, 343

Conread position: 7-363
Cow position: chr3:45279641-45279279 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 240
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 96, 245

Conread position: 7-367
Cow position: chr3:46541679-46542016 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 237
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 262, 39

Conread position: 7-382
Cow position: chr3:68587191-68586819 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 66

Conread position: 7-389
Cow position: chr3:30463004-30463381 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 41

Conread position: 7-390
Cow position: chr3:23168896-23169286 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 276
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 121, 28

Conread position: 8-199
Cow position: chr3:65308282-65308476 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 8-210
Cow position: chr3:44960116-44959909 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 111, 164

Conread position: 8-240
Cow position: chr3:54067965-54067735 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 119, 27

Conread position: 8-265
Cow position: chr3:31349938-31350193 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 120, 8

Conread position: 8-269
Cow position: chr3:14547170-14546909 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 172
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 110, 88

Conread position: 8-315
Cow position: chr3:17058376-17058678 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 211
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 121, 90

Conread position: 8-319
Cow position: chr3:3889406-3889709 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 210
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 116, 64

Conread position: 8-346
Cow position: chr3:54100542-54100891 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 241
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 69, 238

Conread position: 8-349
Cow position: chr3:24615671-24616008 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 235
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 65, 30

Conread position: 8-353
Cow position: chr3:54435139-54434800 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 233
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 136, 85

Conread position: 8-360
Cow position: chr3:74088006-74088352 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 242
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 106, 150

Conread position: 8-363
Cow position: chr3:23471292-23471649 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 121, 61

Conread position: 8-364
Cow position: chr3:46005844-46006213 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 256
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 18, 13

Conread position: 8-373
Cow position: chr3:35915890-35915508 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 249
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 109, 30

Conread position: 8-381
Cow position: chr3:18067301-18066932 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 28

Conread position: 8-389
Cow position: chr3:15051781-15052160 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 80

Conread position: 8-389
Cow position: chr3:26904270-26903900 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 268
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 121, 62

Conread position: 8-390
Cow position: chr3:26970982-26970609 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 266
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 120, 22

Conread position: 8-390
Cow position: chr3:49482543-49482925 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 30

Conread position: 8-390
Cow position: chr3:53150504-53150111 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 262
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 120, 68

Conread position: 8-392
Cow position: chr3:8061291-8060914 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 264
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 120, 33

Conread position: 8-392
Cow position: chr3:60597708-60597330 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 274
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 106, 66

Conread position: 8-392
Cow position: chr3:68145684-68146054 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 31

Conread position: 8-392
Cow position: chr3:70896210-70895828 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 266
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 36, 44

Conread position: 8-392
Cow position: chr3:71496958-71497363 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 279
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 68, 293

Conread position: 8-392
Cow position: chr3:73764044-73764414 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 268
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 258, 78

Conread position: 8-392
Cow position: chr3:75158526-75158147 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 27

Conread position: 8-418
Cow position: chr3:83215440-83215013 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 406

Conread position: 9-256
Cow position: chr3:10668709-10668958 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 171
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 110, 70

Conread position: 9-311
Cow position: chr3:7662027-7661718 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 209
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 95, 165

Conread position: 9-319
Cow position: chr3:71238646-71238331 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 207
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 18, 138

Conread position: 9-363
Cow position: chr3:7337617-7337955 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 248
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 53, 26

Conread position: 9-363
Cow position: chr3:63269404-63269040 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 242
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 41, 325

Conread position: 9-390
Cow position: chr3:55124115-55124494 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 260
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 110, 27

Conread position: 9-392
Cow position: chr3:7678835-7678453 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 259
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 59, 147

Conread position: 9-392
Cow position: chr3:63180034-63179650 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 266
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 39, 29

Conread position: 10-167
Cow position: chr3:67942364-67942526 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 118, 0

Conread position: 10-198
Cow position: chr3:77171487-77171296 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 118, 173

Conread position: 10-216
Cow position: chr3:70756470-70756680 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 114, 192

Conread position: 10-280
Cow position: chr3:75238630-75238354 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 7, 165

Conread position: 10-285
Cow position: chr3:65019684-65019974 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 193
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 238

Conread position: 10-349
Cow position: chr3:49679303-49678954 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 238
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 118, 82

Conread position: 10-363
Cow position: chr3:29891237-29891599 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 243
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 118, 240

Conread position: 10-392
Cow position: chr3:58540348-58540751 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 269
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 75, 150

Conread position: 11-341
Cow position: chr3:12978447-12978780 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 227
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 117, 84

Conread position: 11-390
Cow position: chr3:51233936-51234312 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 61

Conread position: 12-390
Cow position: chr3:38864285-38863901 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 259
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 71, 105

Conread position: 12-392
Cow position: chr3:17221966-17222362 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 263
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 64, 270

Conread position: 13-160
Cow position: chr3:62370223-62370072 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 146

Conread position: 13-317
Cow position: chr3:1889940-1890252 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 207
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 111, 161

Conread position: 13-322
Cow position: chr3:47417405-47417711 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 214
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 115, 83

Conread position: 13-392
Cow position: chr3:73961528-73961897 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 249
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 119, 276

Conread position: 14-363
Cow position: chr3:55434496-55434146 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 242
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 107, 189

Conread position: 15-277
Cow position: chr3:51609020-51609286 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 113, 87

Conread position: 15-392
Cow position: chr3:57577860-57577476 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 263
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 114, 34

Conread position: 15-392
Cow position: chr3:59000599-59000964 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 58

Conread position: 16-259
Cow position: chr3:40145630-40145385 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 112, 198

Conread position: 16-392
Cow position: chr3:2036467-2036080 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 261
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 92, 220

Conread position: 16-392
Cow position: chr3:53046495-53046875 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 159

Conread position: 16-393
Cow position: chr3:66900564-66900961 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 13

Conread position: 17-363
Cow position: chr3:74119268-74119627 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 248
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 111, 21

Conread position: 20-390
Cow position: chr3:70334533-70334918 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 262
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 98, 215

Conread position: 21-264
Cow position: chr3:23203071-23203322 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 168
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 106, 0

Conread position: 21-293
Cow position: chr3:11640894-11640612 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 103, 0

Conread position: 21-327
Cow position: chr3:79196921-79196610 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 209
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 74

Conread position: 21-363
Cow position: chr3:45647824-45647495 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 227
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 68

Conread position: 21-363
Cow position: chr3:74079480-74079824 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 236
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 107, 59

Conread position: 21-363
Cow position: chr3:78443409-78443744 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 231
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 107, 162

Conread position: 21-392
Cow position: chr3:7566263-7566637 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 269
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 103, 51

Conread position: 21-392
Cow position: chr3:11987486-11987112 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 55

Conread position: 21-392
Cow position: chr3:16656327-16656699 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 266
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 74, 148

Conread position: 21-392
Cow position: chr3:48241765-48241403 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 14

Conread position: 22-265
Cow position: chr3:84250392-84250632 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 107, 50

Conread position: 23-390
Cow position: chr3:68627531-68627891 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 252
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 105, 70

Conread position: 24-363
Cow position: chr3:15388374-15388030 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 104, 11

Conread position: 24-363
Cow position: chr3:69416623-69416969 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 104, 0

Conread position: 27-353
Cow position: chr3:18185229-18184895 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 214
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 66, 220

Conread position: 27-353
Cow position: chr3:83727097-83727422 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 217
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 70

Conread position: 27-363
Cow position: chr3:74620841-74621178 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 216
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 190, 57

Conread position: 28-360
Cow position: chr3:52608332-52608005 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 238
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 100, 57

Conread position: 29-353
Cow position: chr3:25945245-25944906 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 232
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 85, 27

Conread position: 31-392
Cow position: chr3:23877148-23876780 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 250
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 97, 22

Conread position: 31-392
Cow position: chr3:74134855-74134487 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 250
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 56, 29

Conread position: 33-375
Cow position: chr3:44102113-44101773 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 95, 48

Conread position: 34-319
Cow position: chr3:73820217-73820512 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 55, 183

Conread position: 38-391
Cow position: chr3:30055308-30055663 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 244
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 82, 189

Conread position: 38-392
Cow position: chr3:53572608-53572968 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 234
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 89, 189

Conread position: 38-392
Cow position: chr3:80565104-80564742 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 254
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 90, 10

Conread position: 39-392
Cow position: chr3:72391228-72390862 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 259
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 57, 199

Conread position: 42-392
Cow position: chr3:6690140-6689776 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 245
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 71, 50

Conread position: 51-349
Cow position: chr3:53739066-53739357 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 216, 65

Conread position: 51-392
Cow position: chr3:12711783-12712141 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 243
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 15, 0

Conread position: 51-392
Cow position: chr3:28898091-28898441 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 239
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 43, 188

Conread position: 57-382
Cow position: chr3:82461298-82460973 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 223
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 74, 30

Conread position: 61-363
Cow position: chr3:49790687-49790993 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 31, 160

Conread position: 63-363
Cow position: chr3:72168611-72168902 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 207
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 65, 46

Conread position: 67-364
Cow position: chr3:20677729-20678021 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 204
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 21

Conread position: 69-309
Cow position: chr3:22510136-22509894 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 26

Conread position: 70-310
Cow position: chr3:84175712-84175959 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 168
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 26

Conread position: 70-389
Cow position: chr3:81470988-81471316 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 220
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 58, 27

Conread position: 70-390
Cow position: chr3:49383060-49382736 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 219
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 26

Conread position: 70-392
Cow position: chr3:15752526-15752846 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 18

Conread position: 70-392
Cow position: chr3:52863071-52863403 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 233
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 48, 43

Conread position: 71-360
Cow position: chr3:2680624-2680334 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 199
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 57, 108

Conread position: 71-363
Cow position: chr3:15506560-15506266 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 200
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 90

Conread position: 71-373
Cow position: chr3:57760609-57760304 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 219
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 57, 161

Conread position: 74-323
Cow position: chr3:43727179-43726931 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 38, 58

Conread position: 75-392
Cow position: chr3:27940036-27940346 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 222
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 54, 99

Conread position: 76-390
Cow position: chr3:67704652-67704324 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 222
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 52, 247

Conread position: 77-294
Cow position: chr3:72503791-72504016 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 77-359
Cow position: chr3:46901303-46901015 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 52, 156

Conread position: 77-363
Cow position: chr3:67543765-67544054 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 51, 19

Conread position: 78-346
Cow position: chr3:24935468-24935203 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 184
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 42

Conread position: 78-363
Cow position: chr3:55835716-55836010 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 195
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 24, 246

Conread position: 78-375
Cow position: chr3:59883964-59884269 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 213
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 14, 275

Conread position: 78-391
Cow position: chr3:80053440-80053751 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 50, 18

Conread position: 79-390
Cow position: chr3:56059914-56059591 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 49, 175

Conread position: 80-392
Cow position: chr3:79292929-79292616 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 49, 16

Conread position: 81-363
Cow position: chr3:53113276-53112988 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 47, 240

Conread position: 81-390
Cow position: chr3:5100671-5100977 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 151

Conread position: 81-392
Cow position: chr3:14626049-14626370 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 219
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 48, 176

Conread position: 81-392
Cow position: chr3:57624565-57624249 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 224
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 48, 157

Conread position: 82-359
Cow position: chr3:116290-116016 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 43, 151

Conread position: 82-392
Cow position: chr3:38691308-38691624 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 220
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 47, 7

Conread position: 82-392
Cow position: chr3:70401996-70401684 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 219
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 89

Conread position: 86-363
Cow position: chr3:26960492-26960776 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 42, 89

Conread position: 89-386
Cow position: chr3:4050286-4049986 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 210
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 40, 111

Conread position: 96-345
Cow position: chr3:30222277-30222018 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 100-368
Cow position: chr3:34669651-34669918 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 29, 101

Conread position: 101-363
Cow position: chr3:49650469-49650199 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 27, 0

Conread position: 101-393
Cow position: chr3:55085088-55085403 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 214
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 102-363
Cow position: chr3:66883864-66884126 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 187
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 77

Conread position: 102-392
Cow position: chr3:83815708-83816011 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 200
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 230

Conread position: 103-390
Cow position: chr3:58968824-58969112 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 25, 131

Conread position: 136-360
Cow position: chr3:11712006-11711774 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 39, 32

Conread position: 137-352
Cow position: chr3:26920948-26920732 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 38, 29

Conread position: 137-363
Cow position: chr3:75711346-75711126 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 52

Conread position: 137-372
Cow position: chr3:79270917-79271154 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 12, 106

Conread position: 137-390
Cow position: chr3:31046912-31047166 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 177
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 133, 26

Conread position: 137-392
Cow position: chr3:5097247-5096986 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 190
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 130, 0

Conread position: 140-361
Cow position: chr3:81359070-81359297 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 129, 90

Conread position: 140-397
Cow position: chr3:33698768-33698497 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 86, 107

Conread position: 141-392
Cow position: chr3:23444852-23445108 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 84, 133

Conread position: 146-363
Cow position: chr3:79591860-79592070 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 121, 58

Conread position: 146-391
Cow position: chr3:61171477-61171727 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 168, 83

Conread position: 147-363
Cow position: chr3:70632051-70631833 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 122

Conread position: 147-392
Cow position: chr3:34937874-34937622 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 85, 27

Conread position: 156-361
Cow position: chr3:22089256-22089462 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 114, 0

Conread position: 156-373
Cow position: chr3:75727562-75727779 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 46, 24

Conread position: 173-391
Cow position: chr3:16362731-16362955 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 173-392
Cow position: chr3:45313054-45312835 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 32

Conread position: 174-390
Cow position: chr3:80581665-80581455 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 95, 55

Conread position: 174-392
Cow position: chr3:8147664-8147883 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 145
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 96, 0

Conread position: 174-392
Cow position: chr3:19708101-19708320 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 96, 56

Conread position: 174-392
Cow position: chr3:66292173-66292397 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 83

Conread position: 174-392
Cow position: chr3:84000616-84000394 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 95, 55

Conread position: 174-393
Cow position: chr3:39328403-39328181 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 52, 174

Conread position: 174-393
Cow position: chr3:55106436-55106662 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 55

Conread position: 174-393
Cow position: chr3:65800595-65800374 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 64, 80

Conread position: 178-373
Cow position: chr3:42483907-42483706 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 57, 194

Conread position: 178-392
Cow position: chr3:66609843-66610056 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 89, 137

Conread position: 179-363
Cow position: chr3:15859668-15859852 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 52, 119

Conread position: 179-363
Cow position: chr3:73759518-73759701 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 75, 56

Conread position: 179-363
Cow position: chr3:83201527-83201709 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 179-373
Cow position: chr3:7940555-7940750 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 137

Conread position: 179-392
Cow position: chr3:4031972-4031750 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 145

Conread position: 179-392
Cow position: chr3:59515102-59514893 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 134, 0

Conread position: 179-393
Cow position: chr3:9843585-9843364 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 72, 90

Conread position: 180-392
Cow position: chr3:27544338-27544547 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 87, 7

Conread position: 181-392
Cow position: chr3:28692431-28692648 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 81

Conread position: 184-355
Cow position: chr3:59271536-59271364 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 43, 131

Conread position: 184-363
Cow position: chr3:21050844-21051025 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 45, 50

Conread position: 184-363
Cow position: chr3:63860896-63861082 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 51, 0

Conread position: 184-386
Cow position: chr3:59885386-59885174 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 208

Conread position: 184-392
Cow position: chr3:3164502-3164714 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 86, 49

Conread position: 184-392
Cow position: chr3:43528243-43528455 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 46, 117

Conread position: 184-399
Cow position: chr3:61024308-61024522 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 45, 146

Conread position: 187-363
Cow position: chr3:78201258-78201086 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 187-384
Cow position: chr3:44534769-44534977 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 189-392
Cow position: chr3:47284824-47284619 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 132, 77

Conread position: 190-359
Cow position: chr3:25060067-25059896 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 190-363
Cow position: chr3:11020105-11019935 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 81, 46

Conread position: 190-392
Cow position: chr3:30358646-30358852 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 54, 0

Conread position: 190-393
Cow position: chr3:3062555-3062341 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 42, 155

Conread position: 191-363
Cow position: chr3:14598935-14598765 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 79, 39

Conread position: 192-373
Cow position: chr3:57553863-57554042 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 41, 122

Conread position: 194-363
Cow position: chr3:7408471-7408302 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 36

Conread position: 195-363
Cow position: chr3:27212346-27212177 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 122

Conread position: 195-401
Cow position: chr3:73926145-73926350 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 125, 177

Conread position: 196-392
Cow position: chr3:17952639-17952438 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 196-392
Cow position: chr3:41328424-41328237 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 73, 38

Conread position: 200-392
Cow position: chr3:49455215-49455017 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 70, 30

Conread position: 204-388
Cow position: chr3:22820545-22820355 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 28, 121

Conread position: 205-392
Cow position: chr3:29807439-29807244 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 15, 111

Conread position: 206-359
Cow position: chr3:65381121-65380972 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 206-392
Cow position: chr3:42178130-42177940 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 142

Conread position: 209-387
Cow position: chr3:80922546-80922355 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 216-358
Cow position: chr3:45743700-45743556 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 118

Conread position: 219-392
Cow position: chr3:76015246-76015081 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 16

Conread position: 222-346
Cow position: chr3:78739811-78739688 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 45, 84

Conread position: 222-392
Cow position: chr3:41367030-41367202 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 85

Conread position: 222-392
Cow position: chr3:48296665-48296491 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 46, 91

Conread position: 222-392
Cow position: chr3:80081867-80082036 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 45, 93

Conread position: 229-392
Cow position: chr3:15661751-15661918 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 40, 124

Conread position: 230-393
Cow position: chr3:6853557-6853720 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 39, 117

Conread position: 231-392
Cow position: chr3:4087217-4087384 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 232-390
Cow position: chr3:75535054-75534896 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 130, 36

Conread position: 234-359
Cow position: chr3:16891242-16891117 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 66

Conread position: 234-363
Cow position: chr3:79208054-79208184 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 48

Conread position: 234-390
Cow position: chr3:82359986-82359829 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 58

Conread position: 234-392
Cow position: chr3:20437708-20437864 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 57

Conread position: 237-389
Cow position: chr3:2483387-2483238 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 113

Conread position: 237-390
Cow position: chr3:4861624-4861473 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 123, 24

Conread position: 237-390
Cow position: chr3:42367561-42367715 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 133, 29

Conread position: 237-392
Cow position: chr3:22872106-22872270 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 237-392
Cow position: chr3:59208755-59208596 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 84

Conread position: 238-387
Cow position: chr3:48578771-48578626 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 112, 19

Conread position: 242-389
Cow position: chr3:49140106-49140251 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 79

Conread position: 242-391
Cow position: chr3:23265358-23265512 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 243-363
Cow position: chr3:83921132-83921017 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 43

Conread position: 244-360
Cow position: chr3:8717186-8717067 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 245-382
Cow position: chr3:56704611-56704748 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 69

Conread position: 245-393
Cow position: chr3:23270031-23269883 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 22, 121

Conread position: 246-380
Cow position: chr3:61361338-61361201 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 250-392
Cow position: chr3:18855023-18854875 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 290-392
Cow position: chr3:84368485-84368588 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 0

Show alignments to all cow chromosomes.