Non-Coding RNA Search

Cow genome map


           Conread name:
           Lym1-jns73_D06.f
        

               Conread position:
               1-112
               

               Cow position:
               chr9:48046362-48046473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-117
               

               Cow position:
               chr9:45711176-45711060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-158
               

               Cow position:
               chr9:19657147-19656990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               127, 34
               

               Conread position:
               1-160
               

               Cow position:
               chr9:28315251-28315417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               1-160
               

               Cow position:
               chr9:34964907-34964755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               1-166
               

               Cow position:
               chr9:61019538-61019368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               1-193
               

               Cow position:
               chr9:34276386-34276189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               1-199
               

               Cow position:
               chr9:41470274-41470073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               127, 182
               

               Conread position:
               1-203
               

               Cow position:
               chr9:31344783-31344576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               1-208
               

               Cow position:
               chr9:14738079-14738285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               127, 71
               

               Conread position:
               1-210
               

               Cow position:
               chr9:8613386-8613173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               119, 41
               

               Conread position:
               1-219
               

               Cow position:
               chr9:27345762-27345537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               80, 108
               

               Conread position:
               1-219
               

               Cow position:
               chr9:48017940-48017727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               1-222
               

               Cow position:
               chr9:14882309-14882083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 78
               

               Conread position:
               1-225
               

               Cow position:
               chr9:28156527-28156746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1-228
               

               Cow position:
               chr9:64629537-64629309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               16, 36
               

               Conread position:
               1-234
               

               Cow position:
               chr9:57131325-57131557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               127, 37
               

               Conread position:
               1-242
               

               Cow position:
               chr9:47517024-47517269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               127, 94
               

               Conread position:
               1-260
               

               Cow position:
               chr9:34344436-34344697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               127, 187
               

               Conread position:
               1-265
               

               Cow position:
               chr9:6954426-6954154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               1-265
               

               Cow position:
               chr9:52755025-52754764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               123, 94
               

               Conread position:
               1-283
               

               Cow position:
               chr9:60399016-60399300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               127, 175
               

               Conread position:
               1-301
               

               Cow position:
               chr9:34410566-34410267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               44, 38
               

               Conread position:
               1-304
               

               Cow position:
               chr9:13744107-13743800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               93, 248
               

               Conread position:
               1-306
               

               Cow position:
               chr9:37934412-37934102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               120, 232
               

               Conread position:
               1-306
               

               Cow position:
               chr9:44396486-44396794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               127, 199
               

               Conread position:
               1-315
               

               Cow position:
               chr9:32348996-32348678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               34, 237
               

               Conread position:
               1-316
               

               Cow position:
               chr9:20815693-20816007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               72, 95
               

               Conread position:
               1-317
               

               Cow position:
               chr9:32670119-32669802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               126, 34
               

               Conread position:
               1-320
               

               Cow position:
               chr9:42264048-42264355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               69, 83
               

               Conread position:
               1-329
               

               Cow position:
               chr9:43757371-43757694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               126, 35
               

               Conread position:
               1-329
               

               Cow position:
               chr9:52267935-52267600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               70, 170
               

               Conread position:
               1-349
               

               Cow position:
               chr9:40215074-40215420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 92
               

               Conread position:
               1-355
               

               Cow position:
               chr9:12910573-12910216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               243
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               113, 71
               

               Conread position:
               1-360
               

               Cow position:
               chr9:13205736-13205380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               70, 18
               

               Conread position:
               1-360
               

               Cow position:
               chr9:25583658-25584008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               127, 37
               

               Conread position:
               1-360
               

               Cow position:
               chr9:46981395-46981048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               244
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               117, 37
               

               Conread position:
               1-360
               

               Cow position:
               chr9:62859508-62859861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               238
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               183, 60
               

               Conread position:
               1-363
               

               Cow position:
               chr9:8547636-8548006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               249
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               126, 32
               

               Conread position:
               1-363
               

               Cow position:
               chr9:26057602-26057249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 38
               

               Conread position:
               1-363
               

               Cow position:
               chr9:32676504-32676873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               86, 34
               

               Conread position:
               1-363
               

               Cow position:
               chr9:40303308-40302938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               250
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               163, 71
               

               Conread position:
               1-363
               

               Cow position:
               chr9:44709660-44710016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               251
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               127, 20
               

               Conread position:
               1-363
               

               Cow position:
               chr9:58614324-58614680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 86
               

               Conread position:
               1-373
               

               Cow position:
               chr9:20942792-20942410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 219
               

               Conread position:
               1-374
               

               Cow position:
               chr9:6839817-6840208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               267
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               19, 96
               

               Conread position:
               1-384
               

               Cow position:
               chr9:61022446-61022824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               12, 91
               

               Conread position:
               1-388
               

               Cow position:
               chr9:58448299-58447908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               269
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               127, 256
               

               Conread position:
               1-390
               

               Cow position:
               chr9:28772968-28773339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               262
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               237, 44
               

               Conread position:
               1-392
               

               Cow position:
               chr9:6397959-6397561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 90
               

               Conread position:
               1-392
               

               Cow position:
               chr9:7409604-7410006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               285
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               127, 34
               

               Conread position:
               1-392
               

               Cow position:
               chr9:20901291-20900906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               268
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               175, 71
               

               Conread position:
               1-392
               

               Cow position:
               chr9:21460326-21459933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               127, 46
               

               Conread position:
               1-392
               

               Cow position:
               chr9:33597800-33598205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 241
               

               Conread position:
               1-392
               

               Cow position:
               chr9:48118850-48118478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               270
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               86, 31
               

               Conread position:
               1-392
               

               Cow position:
               chr9:51566671-51566262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 261
               

               Conread position:
               1-392
               

               Cow position:
               chr9:53762526-53762925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               268
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               127, 71
               

               Conread position:
               2-239
               

               Cow position:
               chr9:2037264-2037497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               71, 125
               

               Conread position:
               3-160
               

               Cow position:
               chr9:17785741-17785578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               3-166
               

               Cow position:
               chr9:8467888-8468051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               125, 33
               

               Conread position:
               4-117
               

               Cow position:
               chr9:13722311-13722198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-127
               

               Cow position:
               chr9:58232494-58232371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-160
               

               Cow position:
               chr9:9091280-9091117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               4-165
               

               Cow position:
               chr9:53632096-53631930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               4-193
               

               Cow position:
               chr9:36457826-36458020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               4-195
               

               Cow position:
               chr9:40984334-40984526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               124, 68
               

               Conread position:
               4-210
               

               Cow position:
               chr9:29984291-29984502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               4-211
               

               Cow position:
               chr9:41644923-41644711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               4-226
               

               Cow position:
               chr9:25375903-25375682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               124, 33
               

               Conread position:
               4-228
               

               Cow position:
               chr9:48016819-48017037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               171, 87
               

               Conread position:
               4-233
               

               Cow position:
               chr9:5104580-5104342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               77, 159
               

               Conread position:
               4-233
               

               Cow position:
               chr9:12786646-12786412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               4-235
               

               Cow position:
               chr9:8992349-8992116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               113, 68
               

               Conread position:
               4-236
               

               Cow position:
               chr9:36627952-36628182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               124, 74
               

               Conread position:
               4-253
               

               Cow position:
               chr9:41785051-41785292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               231, 78
               

               Conread position:
               4-256
               

               Cow position:
               chr9:62144881-62145143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               124, 235
               

               Conread position:
               4-258
               

               Cow position:
               chr9:50382488-50382239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               124, 54
               

               Conread position:
               4-260
               

               Cow position:
               chr9:34024529-34024789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               124, 68
               

               Conread position:
               4-262
               

               Cow position:
               chr9:37198957-37199213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               124, 74
               

               Conread position:
               4-263
               

               Cow position:
               chr9:58662073-58662329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               124, 91
               

               Conread position:
               4-264
               

               Cow position:
               chr9:26102562-26102815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               206, 106
               

               Conread position:
               4-265
               

               Cow position:
               chr9:9459819-9460068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               79, 116
               

               Conread position:
               4-265
               

               Cow position:
               chr9:17840849-17840582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               124, 84
               

               Conread position:
               4-265
               

               Cow position:
               chr9:36453708-36453448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               123, 53
               

               Conread position:
               4-274
               

               Cow position:
               chr9:35547095-35547374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               4-275
               

               Cow position:
               chr9:35845189-35844909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               126, 242
               

               Conread position:
               4-278
               

               Cow position:
               chr9:49863726-49863444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               89, 246
               

               Conread position:
               4-283
               

               Cow position:
               chr9:9311689-9311972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               120, 68
               

               Conread position:
               4-285
               

               Cow position:
               chr9:23956147-23955870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               124, 92
               

               Conread position:
               4-286
               

               Cow position:
               chr9:1878168-1877893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               125, 60
               

               Conread position:
               4-286
               

               Cow position:
               chr9:33584854-33584568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               124, 68
               

               Conread position:
               4-286
               

               Cow position:
               chr9:45728607-45728893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               36, 69
               

               Conread position:
               4-286
               

               Cow position:
               chr9:50125770-50125479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 250
               

               Conread position:
               4-288
               

               Cow position:
               chr9:20755929-20755639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               120, 151
               

               Conread position:
               4-288
               

               Cow position:
               chr9:50310933-50310657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               86, 93
               

               Conread position:
               4-314
               

               Cow position:
               chr9:3573294-3573612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               4-317
               

               Cow position:
               chr9:62724372-62724682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               79, 53
               

               Conread position:
               4-319
               

               Cow position:
               chr9:48730258-48730575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               123, 154
               

               Conread position:
               4-327
               

               Cow position:
               chr9:39011637-39011322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               124, 31
               

               Conread position:
               4-332
               

               Cow position:
               chr9:26345132-26344809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               66, 115
               

               Conread position:
               4-333
               

               Cow position:
               chr9:27355748-27356081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               124, 271
               

               Conread position:
               4-333
               

               Cow position:
               chr9:27358534-27358867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               124, 271
               

               Conread position:
               4-341
               

               Cow position:
               chr9:5263334-5263669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               238
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               123, 34
               

               Conread position:
               4-341
               

               Cow position:
               chr9:31215909-31216257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               120, 84
               

               Conread position:
               4-343
               

               Cow position:
               chr9:26477042-26477387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 183
               

               Conread position:
               4-346
               

               Cow position:
               chr9:32019497-32019157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               137, 91
               

               Conread position:
               4-351
               

               Cow position:
               chr9:47591154-47590802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               123, 265
               

               Conread position:
               4-352
               

               Cow position:
               chr9:12280803-12281149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               96, 68
               

               Conread position:
               4-353
               

               Cow position:
               chr9:6340856-6340515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               115, 161
               

               Conread position:
               4-353
               

               Cow position:
               chr9:17677287-17676940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               23, 235
               

               Conread position:
               4-353
               

               Cow position:
               chr9:20318744-20318397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               121, 93
               

               Conread position:
               4-358
               

               Cow position:
               chr9:20579758-20579420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               80, 115
               

               Conread position:
               4-359
               

               Cow position:
               chr9:55256719-55256364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               123, 82
               

               Conread position:
               4-359
               

               Cow position:
               chr9:56453176-56453515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               124, 64
               

               Conread position:
               4-360
               

               Cow position:
               chr9:5227330-5226980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               181, 82
               

               Conread position:
               4-360
               

               Cow position:
               chr9:7362833-7363213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               66, 190
               

               Conread position:
               4-360
               

               Cow position:
               chr9:8997387-8997740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               247
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               110, 168
               

               Conread position:
               4-360
               

               Cow position:
               chr9:20406485-20406822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               124, 77
               

               Conread position:
               4-360
               

               Cow position:
               chr9:36410520-36410168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               251
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               128, 91
               

               Conread position:
               4-363
               

               Cow position:
               chr9:1916138-1916478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               263, 70
               

               Conread position:
               4-363
               

               Cow position:
               chr9:4341326-4340979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               252
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               124, 65
               

               Conread position:
               4-363
               

               Cow position:
               chr9:12428673-12428319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               123, 188
               

               Conread position:
               4-363
               

               Cow position:
               chr9:13670466-13670823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               124, 68
               

               Conread position:
               4-363
               

               Cow position:
               chr9:15806096-15805734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 190
               

               Conread position:
               4-363
               

               Cow position:
               chr9:19538930-19539284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               123, 29
               

               Conread position:
               4-363
               

               Cow position:
               chr9:26279343-26278986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               250
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               37, 169
               

               Conread position:
               4-363
               

               Cow position:
               chr9:28747688-28747334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               253
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               124, 68
               

               Conread position:
               4-363
               

               Cow position:
               chr9:34375097-34374741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               248
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               120, 210
               

               Conread position:
               4-363
               

               Cow position:
               chr9:47500370-47500016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               213, 105
               

               Conread position:
               4-363
               

               Cow position:
               chr9:52638340-52637969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               250
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               124, 170
               

               Conread position:
               4-363
               

               Cow position:
               chr9:56088248-56087880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               73, 235
               

               Conread position:
               4-363
               

               Cow position:
               chr9:58979234-58979588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               250
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               6, 89
               

               Conread position:
               4-363
               

               Cow position:
               chr9:61302833-61303194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               124, 68
               

               Conread position:
               4-364
               

               Cow position:
               chr9:27279136-27279506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 243
               

               Conread position:
               4-366
               

               Cow position:
               chr9:19555219-19555568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               154, 49
               

               Conread position:
               4-369
               

               Cow position:
               chr9:11168575-11168926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 32
               

               Conread position:
               4-373
               

               Cow position:
               chr9:43048787-43048426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               124, 110
               

               Conread position:
               4-373
               

               Cow position:
               chr9:52485084-52484717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               16, 84
               

               Conread position:
               4-374
               

               Cow position:
               chr9:21030134-21030513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               255
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               100, 240
               

               Conread position:
               4-374
               

               Cow position:
               chr9:24887035-24887399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               258
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               120, 91
               

               Conread position:
               4-380
               

               Cow position:
               chr9:9403341-9402970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               253
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               85, 25
               

               Conread position:
               4-388
               

               Cow position:
               chr9:5500694-5501071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               252
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               179, 41
               

               Conread position:
               4-390
               

               Cow position:
               chr9:13169835-13169446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               263
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               100, 83
               

               Conread position:
               4-390
               

               Cow position:
               chr9:45285709-45285309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               81, 293
               

               Conread position:
               4-390
               

               Cow position:
               chr9:51620274-51620658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 65
               

               Conread position:
               4-390
               

               Cow position:
               chr9:53258226-53257838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               116, 112
               

               Conread position:
               4-391
               

               Cow position:
               chr9:50607100-50606730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               264
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               265, 69
               

               Conread position:
               4-392
               

               Cow position:
               chr9:1751159-1751558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 45
               

               Conread position:
               4-392
               

               Cow position:
               chr9:5327092-5327478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               28, 17
               

               Conread position:
               4-392
               

               Cow position:
               chr9:8998183-8998579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 45
               

               Conread position:
               4-392
               

               Cow position:
               chr9:9461837-9461431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               56, 44
               

               Conread position:
               4-392
               

               Cow position:
               chr9:15215860-15215457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               4-392
               

               Cow position:
               chr9:20090890-20091263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               185, 31
               

               Conread position:
               4-392
               

               Cow position:
               chr9:33114169-33114567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               265
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               73, 174
               

               Conread position:
               4-392
               

               Cow position:
               chr9:34697472-34697071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               269
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               124, 161
               

               Conread position:
               4-392
               

               Cow position:
               chr9:35028337-35027949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 87
               

               Conread position:
               4-392
               

               Cow position:
               chr9:45141766-45141381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               123, 69
               

               Conread position:
               4-392
               

               Cow position:
               chr9:52130842-52131242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               267
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               39, 34
               

               Conread position:
               4-392
               

               Cow position:
               chr9:52689784-52689400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               99, 212
               

               Conread position:
               4-392
               

               Cow position:
               chr9:54681351-54681726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               281
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               124, 35
               

               Conread position:
               4-392
               

               Cow position:
               chr9:55795588-55795982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               256
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               128, 66
               

               Conread position:
               4-393
               

               Cow position:
               chr9:41416160-41416576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               285
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               4-393
               

               Cow position:
               chr9:50977426-50977021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               283
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               120, 259
               

               Conread position:
               5-116
               

               Cow position:
               chr9:12495045-12495156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-183
               

               Cow position:
               chr9:8645095-8645278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               123, 16
               

               Conread position:
               5-219
               

               Cow position:
               chr9:44759096-44758885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               113, 67
               

               Conread position:
               5-284
               

               Cow position:
               chr9:52510946-52511227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               89, 187
               

               Conread position:
               5-286
               

               Cow position:
               chr9:39709684-39709959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               95, 224
               

               Conread position:
               5-319
               

               Cow position:
               chr9:4263258-4262945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               123, 83
               

               Conread position:
               5-329
               

               Cow position:
               chr9:61457454-61457784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               123, 233
               

               Conread position:
               5-344
               

               Cow position:
               chr9:60395218-60394879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               123, 67
               

               Conread position:
               5-363
               

               Cow position:
               chr9:14975098-14974739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               68, 230
               

               Conread position:
               5-363
               

               Cow position:
               chr9:19504462-19504810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               112, 56
               

               Conread position:
               5-363
               

               Cow position:
               chr9:31640496-31640131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               122, 27
               

               Conread position:
               5-363
               

               Cow position:
               chr9:53139304-53138940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 232
               

               Conread position:
               5-373
               

               Cow position:
               chr9:31346780-31347154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               251
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               127, 67
               

               Conread position:
               5-381
               

               Cow position:
               chr9:11123649-11123279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               262
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               122, 67
               

               Conread position:
               5-390
               

               Cow position:
               chr9:11299842-11299474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               266
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               122, 75
               

               Conread position:
               5-391
               

               Cow position:
               chr9:9199940-9199561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               124, 31
               

               Conread position:
               5-392
               

               Cow position:
               chr9:1729856-1729452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               274
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               42, 269
               

               Conread position:
               5-392
               

               Cow position:
               chr9:17872276-17871883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               264
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               93, 71
               

               Conread position:
               5-392
               

               Cow position:
               chr9:34286629-34287018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 83
               

               Conread position:
               5-403
               

               Cow position:
               chr9:41728091-41728487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               123, 85
               

               Conread position:
               6-160
               

               Cow position:
               chr9:34423450-34423609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               6-179
               

               Cow position:
               chr9:17769153-17769324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               118, 77
               

               Conread position:
               6-259
               

               Cow position:
               chr9:63169801-63170056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               88, 101
               

               Conread position:
               6-341
               

               Cow position:
               chr9:48563910-48564251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               122, 82
               

               Conread position:
               6-359
               

               Cow position:
               chr9:38792847-38793200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               242
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               122, 220
               

               Conread position:
               6-363
               

               Cow position:
               chr9:17799467-17799818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               250
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               144, 80
               

               Conread position:
               6-363
               

               Cow position:
               chr9:20847778-20848122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               122, 30
               

               Conread position:
               6-392
               

               Cow position:
               chr9:16300742-16300346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               277
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               78, 30
               

               Conread position:
               6-392
               

               Cow position:
               chr9:33940429-33940831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               272
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               57, 15
               

               Conread position:
               7-309
               

               Cow position:
               chr9:32815485-32815779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               96, 81
               

               Conread position:
               7-345
               

               Cow position:
               chr9:52619479-52619821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               92, 168
               

               Conread position:
               7-359
               

               Cow position:
               chr9:42061926-42062299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               7-393
               

               Cow position:
               chr9:22637932-22638325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               265
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               120, 234
               

               Conread position:
               8-256
               

               Cow position:
               chr9:7806120-7805879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               120, 64
               

               Conread position:
               8-283
               

               Cow position:
               chr9:38624790-38624513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               116, 19
               

               Conread position:
               8-286
               

               Cow position:
               chr9:38941603-38941317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               8-286
               

               Cow position:
               chr9:58132114-58131849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               120, 24
               

               Conread position:
               8-318
               

               Cow position:
               chr9:64637386-64637691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               69, 53
               

               Conread position:
               8-341
               

               Cow position:
               chr9:51721053-51720733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               259, 65
               

               Conread position:
               8-346
               

               Cow position:
               chr9:9596116-9595781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               120, 64
               

               Conread position:
               8-353
               

               Cow position:
               chr9:16121007-16121349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               130, 104
               

               Conread position:
               8-359
               

               Cow position:
               chr9:41282846-41283210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 227
               

               Conread position:
               8-359
               

               Cow position:
               chr9:56065400-56065735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               109, 64
               

               Conread position:
               8-363
               

               Cow position:
               chr9:6338627-6338989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               124, 27
               

               Conread position:
               8-363
               

               Cow position:
               chr9:8723629-8723983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               120, 80
               

               Conread position:
               8-363
               

               Cow position:
               chr9:48627857-48628218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               247
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               49, 72
               

               Conread position:
               8-368
               

               Cow position:
               chr9:41679596-41679941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               251
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               78, 62
               

               Conread position:
               8-373
               

               Cow position:
               chr9:49764479-49764856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               59, 82
               

               Conread position:
               8-378
               

               Cow position:
               chr9:34689771-34689399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               251
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               63, 154
               

               Conread position:
               8-390
               

               Cow position:
               chr9:6192623-6192237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               120, 63
               

               Conread position:
               8-390
               

               Cow position:
               chr9:26085891-26086289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               276
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               91, 49
               

               Conread position:
               8-392
               

               Cow position:
               chr9:26403629-26404013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               267
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               110, 65
               

               Conread position:
               8-392
               

               Cow position:
               chr9:34902263-34901891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               265
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               124, 69
               

               Conread position:
               8-392
               

               Cow position:
               chr9:35167003-35167392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 27
               

               Conread position:
               8-392
               

               Cow position:
               chr9:36491070-36490671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               117, 244
               

               Conread position:
               8-392
               

               Cow position:
               chr9:42497662-42498053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               271
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               109, 62
               

               Conread position:
               8-392
               

               Cow position:
               chr9:47906451-47906065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               78, 28
               

               Conread position:
               8-392
               

               Cow position:
               chr9:52407004-52407394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               263
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               212, 30
               

               Conread position:
               8-392
               

               Cow position:
               chr9:55117916-55118303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               65, 88
               

               Conread position:
               9-203
               

               Cow position:
               chr9:34707475-34707281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               119, 63
               

               Conread position:
               9-314
               

               Cow position:
               chr9:60080728-60081048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               9-354
               

               Cow position:
               chr9:8901394-8901042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 87
               

               Conread position:
               9-363
               

               Cow position:
               chr9:9724044-9723693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 158
               

               Conread position:
               9-363
               

               Cow position:
               chr9:25804663-25805025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               9-363
               

               Cow position:
               chr9:43623100-43623447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               118, 205
               

               Conread position:
               9-373
               

               Cow position:
               chr9:22152247-22151887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               109, 63
               

               Conread position:
               9-388
               

               Cow position:
               chr9:63785074-63784703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               109, 62
               

               Conread position:
               9-390
               

               Cow position:
               chr9:10144646-10144250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               73, 11
               

               Conread position:
               9-392
               

               Cow position:
               chr9:6934246-6933848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 160
               

               Conread position:
               9-392
               

               Cow position:
               chr9:18380703-18381083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               263
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               119, 73
               

               Conread position:
               10-260
               

               Cow position:
               chr9:5110692-5110947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               114, 83
               

               Conread position:
               10-358
               

               Cow position:
               chr9:33219121-33218766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               244
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               77, 142
               

               Conread position:
               10-359
               

               Cow position:
               chr9:52578703-52578350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               7, 36
               

               Conread position:
               10-363
               

               Cow position:
               chr9:8936984-8937335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               238
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               78, 218
               

               Conread position:
               10-363
               

               Cow position:
               chr9:30123766-30124111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               183, 57
               

               Conread position:
               10-377
               

               Cow position:
               chr9:12226149-12225776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               260
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               77, 285
               

               Conread position:
               10-392
               

               Cow position:
               chr9:28726893-28726499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 88
               

               Conread position:
               10-392
               

               Cow position:
               chr9:32307398-32307012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               264
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               118, 189
               

               Conread position:
               13-210
               

               Cow position:
               chr9:54986322-54986117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               13-339
               

               Cow position:
               chr9:1756312-1755975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               102, 86
               

               Conread position:
               13-360
               

               Cow position:
               chr9:62150950-62151289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               239
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               112, 36
               

               Conread position:
               13-363
               

               Cow position:
               chr9:22443784-22443431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 60
               

               Conread position:
               13-390
               

               Cow position:
               chr9:9753563-9753173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               271
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               76, 10
               

               Conread position:
               14-183
               

               Cow position:
               chr9:14357252-14357426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               14-336
               

               Cow position:
               chr9:19034194-19034504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               253, 107
               

               Conread position:
               16-160
               

               Cow position:
               chr9:28342813-28342663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               16-231
               

               Cow position:
               chr9:41964890-41964676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               101, 30
               

               Conread position:
               16-309
               

               Cow position:
               chr9:32853817-32853502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               112, 22
               

               Conread position:
               16-333
               

               Cow position:
               chr9:39211453-39211768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               112, 54
               

               Conread position:
               16-363
               

               Cow position:
               chr9:34958210-34957864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               112, 64
               

               Conread position:
               16-392
               

               Cow position:
               chr9:10010654-10011024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 214
               

               Conread position:
               17-384
               

               Cow position:
               chr9:30402586-30402204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 21
               

               Conread position:
               21-126
               

               Cow position:
               chr9:29091617-29091722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               21-363
               

               Cow position:
               chr9:55288042-55287707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               108, 63
               

               Conread position:
               21-392
               

               Cow position:
               chr9:3070570-3070199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               59, 110
               

               Conread position:
               21-392
               

               Cow position:
               chr9:18216065-18215685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               73, 85
               

               Conread position:
               21-392
               

               Cow position:
               chr9:29006406-29006784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               107, 51
               

               Conread position:
               21-392
               

               Cow position:
               chr9:29185293-29184909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 303
               

               Conread position:
               21-411
               

               Cow position:
               chr9:56772908-56773328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               42, 240
               

               Conread position:
               23-319
               

               Cow position:
               chr9:34283802-34284095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               109, 54
               

               Conread position:
               23-373
               

               Cow position:
               chr9:8919853-8920198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               251
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               106, 50
               

               Conread position:
               23-380
               

               Cow position:
               chr9:16811808-16811447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               8, 38
               

               Conread position:
               23-390
               

               Cow position:
               chr9:23388831-23388456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               49, 190
               

               Conread position:
               24-237
               

               Cow position:
               chr9:55495139-55494921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               24-263
               

               Cow position:
               chr9:46930310-46930546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               113, 9
               

               Conread position:
               27-258
               

               Cow position:
               chr9:33541905-33542142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               27-353
               

               Cow position:
               chr9:3185982-3186319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               95, 59
               

               Conread position:
               27-390
               

               Cow position:
               chr9:20322236-20321894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               247
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               28-386
               

               Cow position:
               chr9:9551946-9552305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               100, 14
               

               Conread position:
               29-392
               

               Cow position:
               chr9:33120036-33119658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               99, 299
               

               Conread position:
               34-376
               

               Cow position:
               chr9:9815270-9815621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 157
               

               Conread position:
               35-363
               

               Cow position:
               chr9:52505448-52505116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               97, 191
               

               Conread position:
               38-388
               

               Cow position:
               chr9:44834101-44833745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               231
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               89, 186
               

               Conread position:
               39-360
               

               Cow position:
               chr9:26506979-26507313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               55, 207
               

               Conread position:
               39-363
               

               Cow position:
               chr9:17741076-17740757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               89, 51
               

               Conread position:
               39-390
               

               Cow position:
               chr9:8546203-8546540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               230, 38
               

               Conread position:
               39-390
               

               Cow position:
               chr9:44832183-44831833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               89, 7
               

               Conread position:
               42-371
               

               Cow position:
               chr9:47446150-47445829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               193, 77
               

               Conread position:
               42-392
               

               Cow position:
               chr9:42446127-42445758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               42-392
               

               Cow position:
               chr9:56011371-56011721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               78, 42
               

               Conread position:
               42-393
               

               Cow position:
               chr9:9443743-9443372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               257
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               47, 142
               

               Conread position:
               42-393
               

               Cow position:
               chr9:41513505-41513844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               50, 61
               

               Conread position:
               49-306
               

               Cow position:
               chr9:6596350-6596100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               79, 31
               

               Conread position:
               49-413
               

               Cow position:
               chr9:48107236-48106876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               305, 72
               

               Conread position:
               51-323
               

               Cow position:
               chr9:41394773-41394504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               77, 186
               

               Conread position:
               53-387
               

               Cow position:
               chr9:823838-824174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               85, 213
               

               Conread position:
               59-372
               

               Cow position:
               chr9:36445500-36445822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               30, 253
               

               Conread position:
               59-392
               

               Cow position:
               chr9:4646437-4646104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               69, 42
               

               Conread position:
               61-374
               

               Cow position:
               chr9:54528397-54528712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               21, 116
               

               Conread position:
               61-389
               

               Cow position:
               chr9:9654425-9654095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               43, 114
               

               Conread position:
               63-392
               

               Cow position:
               chr9:59386883-59386553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               225
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               66, 180
               

               Conread position:
               70-340
               

               Cow position:
               chr9:17310669-17310387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               22, 43
               

               Conread position:
               70-358
               

               Cow position:
               chr9:31638764-31638455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               70-363
               

               Cow position:
               chr9:18217206-18216913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               50, 172
               

               Conread position:
               70-391
               

               Cow position:
               chr9:1972841-1973165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               59, 103
               

               Conread position:
               70-391
               

               Cow position:
               chr9:8288511-8288840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               61, 102
               

               Conread position:
               70-392
               

               Cow position:
               chr9:1520846-1520506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               59, 44
               

               Conread position:
               70-392
               

               Cow position:
               chr9:7634176-7634491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               168, 47
               

               Conread position:
               70-392
               

               Cow position:
               chr9:22696116-22696441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               58, 84
               

               Conread position:
               70-392
               

               Cow position:
               chr9:50081145-50080822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               48, 18
               

               Conread position:
               70-392
               

               Cow position:
               chr9:55084408-55084073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               58, 81
               

               Conread position:
               71-363
               

               Cow position:
               chr9:39681228-39681544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               71-393
               

               Cow position:
               chr9:17411299-17410959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               238
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               74-392
               

               Cow position:
               chr9:26435159-26434843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               54, 13
               

               Conread position:
               76-392
               

               Cow position:
               chr9:5245753-5246073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               42, 8
               

               Conread position:
               77-374
               

               Cow position:
               chr9:37677794-37678088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               51, 98
               

               Conread position:
               77-390
               

               Cow position:
               chr9:35105890-35105563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               46, 166
               

               Conread position:
               77-392
               

               Cow position:
               chr9:31079179-31078858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               51, 28
               

               Conread position:
               77-392
               

               Cow position:
               chr9:50139187-50139505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               55, 11
               

               Conread position:
               77-393
               

               Cow position:
               chr9:64559982-64559662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               52, 130
               

               Conread position:
               78-389
               

               Cow position:
               chr9:28354418-28354739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               51, 199
               

               Conread position:
               79-392
               

               Cow position:
               chr9:14796868-14796554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               48, 146
               

               Conread position:
               81-390
               

               Cow position:
               chr9:5594406-5594722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               20, 93
               

               Conread position:
               81-393
               

               Cow position:
               chr9:21888072-21888394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 112
               

               Conread position:
               88-316
               

               Cow position:
               chr9:33696946-33697173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               89-384
               

               Cow position:
               chr9:43443716-43444011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               40, 92
               

               Conread position:
               89-385
               

               Cow position:
               chr9:43870887-43871192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               89-388
               

               Cow position:
               chr9:63745727-63746024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               39, 52
               

               Conread position:
               89-392
               

               Cow position:
               chr9:38961516-38961214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               40, 23
               

               Conread position:
               95-319
               

               Cow position:
               chr9:1867369-1867597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               34, 87
               

               Conread position:
               95-352
               

               Cow position:
               chr9:31403330-31403059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 162
               

               Conread position:
               95-391
               

               Cow position:
               chr9:55889733-55890032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               33, 14
               

               Conread position:
               96-360
               

               Cow position:
               chr9:50075983-50076246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 83
               

               Conread position:
               98-391
               

               Cow position:
               chr9:46316860-46316565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               30, 72
               

               Conread position:
               102-363
               

               Cow position:
               chr9:19493541-19493272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               26, 71
               

               Conread position:
               114-392
               

               Cow position:
               chr9:8534753-8534459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               18, 161
               

               Conread position:
               118-392
               

               Cow position:
               chr9:6089030-6089321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               10, 167
               

               Conread position:
               127-360
               

               Cow position:
               chr9:24997565-24997334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 107
               

               Conread position:
               136-363
               

               Cow position:
               chr9:11313546-11313319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               131, 91
               

               Conread position:
               136-365
               

               Cow position:
               chr9:9823542-9823314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               102, 56
               

               Conread position:
               136-392
               

               Cow position:
               chr9:5509688-5509948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               39, 34
               

               Conread position:
               137-346
               

               Cow position:
               chr9:17928722-17928933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               87, 178
               

               Conread position:
               137-360
               

               Cow position:
               chr9:35375391-35375612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               102, 16
               

               Conread position:
               137-392
               

               Cow position:
               chr9:34468613-34468368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               38, 31
               

               Conread position:
               137-392
               

               Cow position:
               chr9:44915132-44914871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               91, 128
               

               Conread position:
               137-395
               

               Cow position:
               chr9:49416952-49417210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               39, 31
               

               Conread position:
               140-363
               

               Cow position:
               chr9:5763663-5763443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               94, 32
               

               Conread position:
               146-392
               

               Cow position:
               chr9:35533979-35533727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               82, 88
               

               Conread position:
               146-392
               

               Cow position:
               chr9:38343864-38344118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               88, 29
               

               Conread position:
               146-392
               

               Cow position:
               chr9:41789258-41789503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               121, 155
               

               Conread position:
               153-349
               

               Cow position:
               chr9:41853413-41853619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               158-363
               

               Cow position:
               chr9:50703125-50702925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               59, 88
               

               Conread position:
               158-392
               

               Cow position:
               chr9:8869157-8868912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               72, 89
               

               Conread position:
               172-364
               

               Cow position:
               chr9:59795289-59795091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               173-390
               

               Cow position:
               chr9:36827136-36827347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               173-393
               

               Cow position:
               chr9:54998028-54997798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               97, 48
               

               Conread position:
               174-359
               

               Cow position:
               chr9:3371569-3371760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               69, 53
               

               Conread position:
               174-363
               

               Cow position:
               chr9:31270782-31270969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               93, 59
               

               Conread position:
               174-363
               

               Cow position:
               chr9:58134018-58133835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               54, 95
               

               Conread position:
               174-385
               

               Cow position:
               chr9:33092954-33093171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 48
               

               Conread position:
               174-388
               

               Cow position:
               chr9:32371755-32371541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               95, 71
               

               Conread position:
               174-392
               

               Cow position:
               chr9:6225453-6225228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               174-392
               

               Cow position:
               chr9:34919258-34919042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               95, 55
               

               Conread position:
               177-392
               

               Cow position:
               chr9:29035031-29034815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               51, 143
               

               Conread position:
               178-363
               

               Cow position:
               chr9:58734372-58734561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               179-363
               

               Cow position:
               chr9:61997591-61997408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               53, 78
               

               Conread position:
               179-390
               

               Cow position:
               chr9:22361017-22361237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 128
               

               Conread position:
               179-392
               

               Cow position:
               chr9:1952263-1952045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               56, 137
               

               Conread position:
               179-392
               

               Cow position:
               chr9:5531951-5532177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               180-391
               

               Cow position:
               chr9:10092386-10092170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               43, 72
               

               Conread position:
               180-392
               

               Cow position:
               chr9:30749581-30749361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               45, 68
               

               Conread position:
               183-363
               

               Cow position:
               chr9:1879391-1879567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               183-393
               

               Cow position:
               chr9:53602438-53602638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               139, 50
               

               Conread position:
               184-373
               

               Cow position:
               chr9:3847680-3847868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               72, 46
               

               Conread position:
               184-373
               

               Cow position:
               chr9:6118137-6117947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               48, 73
               

               Conread position:
               184-392
               

               Cow position:
               chr9:37000049-36999837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               45, 110
               

               Conread position:
               184-393
               

               Cow position:
               chr9:23027816-23028019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               186-392
               

               Cow position:
               chr9:27077228-27077027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               83, 47
               

               Conread position:
               187-349
               

               Cow position:
               chr9:34000605-34000443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               134, 40
               

               Conread position:
               187-392
               

               Cow position:
               chr9:40603960-40604174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               82, 42
               

               Conread position:
               188-354
               

               Cow position:
               chr9:34911175-34911343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               189-360
               

               Cow position:
               chr9:64517082-64516911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               80, 48
               

               Conread position:
               189-392
               

               Cow position:
               chr9:18002937-18002725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               190-359
               

               Cow position:
               chr9:25657527-25657696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               54, 66
               

               Conread position:
               190-368
               

               Cow position:
               chr9:14358181-14358358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               80, 54
               

               Conread position:
               191-392
               

               Cow position:
               chr9:17785437-17785237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               80, 39
               

               Conread position:
               195-368
               

               Cow position:
               chr9:49279487-49279670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               35, 136
               

               Conread position:
               195-390
               

               Cow position:
               chr9:27697701-27697508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               172, 33
               

               Conread position:
               196-363
               

               Cow position:
               chr9:35890903-35890733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               204-391
               

               Cow position:
               chr9:35306086-35305897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               63, 124
               

               Conread position:
               204-392
               

               Cow position:
               chr9:50667453-50667648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               212-392
               

               Cow position:
               chr9:5319674-5319853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               158, 10
               

               Conread position:
               213-363
               

               Cow position:
               chr9:41652827-41652976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               57, 32
               

               Conread position:
               219-392
               

               Cow position:
               chr9:54611185-54611007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               220-359
               

               Cow position:
               chr9:32692164-32692307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               221-392
               

               Cow position:
               chr9:33681733-33681908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               48, 8
               

               Conread position:
               223-363
               

               Cow position:
               chr9:41995760-41995901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               223-373
               

               Cow position:
               chr9:42998416-42998267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               47, 7
               

               Conread position:
               228-392
               

               Cow position:
               chr9:9490847-9491017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               230-391
               

               Cow position:
               chr9:57951266-57951106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               37, 22
               

               Conread position:
               233-390
               

               Cow position:
               chr9:32812405-32812570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               37, 88
               

               Conread position:
               233-392
               

               Cow position:
               chr9:36623383-36623228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               89, 36
               

               Conread position:
               235-392
               

               Cow position:
               chr9:38875512-38875350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               34, 9
               

               Conread position:
               237-363
               

               Cow position:
               chr9:51011481-51011353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               35, 60
               

               Conread position:
               237-392
               

               Cow position:
               chr9:22114570-22114409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               32, 78
               

               Conread position:
               237-392
               

               Cow position:
               chr9:22228018-22227862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               32, 78
               

               Conread position:
               237-392
               

               Cow position:
               chr9:25958485-25958639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               47, 30
               

               Conread position:
               238-390
               

               Cow position:
               chr9:5393114-5393273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 74
               

               Conread position:
               239-387
               

               Cow position:
               chr9:42585564-42585405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               242-359
               

               Cow position:
               chr9:8524905-8525021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 74
               

               Conread position:
               242-360
               

               Cow position:
               chr9:1855336-1855452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               242-388
               

               Cow position:
               chr9:10308939-10308788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               243-389
               

               Cow position:
               chr9:37069499-37069348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               244-392
               

               Cow position:
               chr9:20319008-20318853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               257-392
               

               Cow position:
               chr9:5161980-5161842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               5, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-112
Cow position:	chr9:48046362-48046473 (view UCSC Genome Browser custom track)
Alignm length:	112
Alignm identity:	88
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	1-117
Cow position:	chr9:45711176-45711060 (view UCSC Genome Browser custom track)
Alignm length:	117
Alignm identity:	91
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	1-158
Cow position:	chr9:19657147-19656990 (view UCSC Genome Browser custom track)
Alignm length:	163
Alignm identity:	125
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	127, 34
Conread position:	1-160
Cow position:	chr9:28315251-28315417 (view UCSC Genome Browser custom track)
Alignm length:	167
Alignm identity:	124
Alignm E-value:	5e-24
Alignm gaps (pig, cow):	93, 0
Conread position:	1-166
Cow position:	chr9:61019538-61019368 (view UCSC Genome Browser custom track)
Alignm length:	171
Alignm identity:	123
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	116, 0
Conread position:	1-193
Cow position:	chr9:34276386-34276189 (view UCSC Genome Browser custom track)
Alignm length:	198
Alignm identity:	139
Alignm E-value:	2e-25
Alignm gaps (pig, cow):	126, 0
Conread position:	1-199
Cow position:	chr9:41470274-41470073 (view UCSC Genome Browser custom track)
Alignm length:	204
Alignm identity:	141
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	127, 182
Conread position:	1-203
Cow position:	chr9:31344783-31344576 (view UCSC Genome Browser custom track)
Alignm length:	208
Alignm identity:	151
Alignm E-value:	1e-31
Alignm gaps (pig, cow):	127, 0
Conread position:	1-208
Cow position:	chr9:14738079-14738285 (view UCSC Genome Browser custom track)
Alignm length:	213
Alignm identity:	147
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	127, 71
Conread position:	1-210
Cow position:	chr9:8613386-8613173 (view UCSC Genome Browser custom track)
Alignm length:	216
Alignm identity:	151
Alignm E-value:	5e-25
Alignm gaps (pig, cow):	119, 41
Conread position:	1-219
Cow position:	chr9:27345762-27345537 (view UCSC Genome Browser custom track)
Alignm length:	227
Alignm identity:	155
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	80, 108
Conread position:	1-222
Cow position:	chr9:14882309-14882083 (view UCSC Genome Browser custom track)
Alignm length:	230
Alignm identity:	156
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	47, 78
Conread position:	1-225
Cow position:	chr9:28156527-28156746 (view UCSC Genome Browser custom track)
Alignm length:	225
Alignm identity:	154
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	123, 0
Conread position:	1-228
Cow position:	chr9:64629537-64629309 (view UCSC Genome Browser custom track)
Alignm length:	235
Alignm identity:	162
Alignm E-value:	4e-22
Alignm gaps (pig, cow):	16, 36
Conread position:	1-234
Cow position:	chr9:57131325-57131557 (view UCSC Genome Browser custom track)
Alignm length:	239
Alignm identity:	167
Alignm E-value:	7e-28
Alignm gaps (pig, cow):	127, 37
Conread position:	1-242
Cow position:	chr9:47517024-47517269 (view UCSC Genome Browser custom track)
Alignm length:	248
Alignm identity:	170
Alignm E-value:	7e-28
Alignm gaps (pig, cow):	127, 94
Conread position:	1-260
Cow position:	chr9:34344436-34344697 (view UCSC Genome Browser custom track)
Alignm length:	265
Alignm identity:	171
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	127, 187
Conread position:	1-265
Cow position:	chr9:6954426-6954154 (view UCSC Genome Browser custom track)
Alignm length:	273
Alignm identity:	190
Alignm E-value:	5e-35
Alignm gaps (pig, cow):	128, 0
Conread position:	1-283
Cow position:	chr9:60399016-60399300 (view UCSC Genome Browser custom track)
Alignm length:	290
Alignm identity:	193
Alignm E-value:	5e-25
Alignm gaps (pig, cow):	127, 175
Conread position:	1-301
Cow position:	chr9:34410566-34410267 (view UCSC Genome Browser custom track)
Alignm length:	309
Alignm identity:	212
Alignm E-value:	4e-33
Alignm gaps (pig, cow):	44, 38