Cow genome map

Conread name: Lym2-sn01_E07.f

Conread position: 1-386
Cow position: chr1:33389421-33388998 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 297
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 17, 39

Conread position: 1-581
Cow position: chr1:38396878-38396310 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 167

Conread position: 1-647
Cow position: chr1:44101067-44101741 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 125

Conread position: 1-667
Cow position: chr1:61737816-61738525 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 218

Conread position: 17-672
Cow position: chr1:63502110-63501434 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 31

Conread position: 48-666
Cow position: chr1:30059165-30058528 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 27

Conread position: 78-294
Cow position: chr1:44137465-44137685 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 38, 120

Conread position: 79-671
Cow position: chr1:77656296-77655684 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 26

Conread position: 83-582
Cow position: chr1:31421704-31422180 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 118

Conread position: 108-672
Cow position: chr1:99375514-99374943 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 23

Conread position: 109-672
Cow position: chr1:32341498-32342099 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 23

Conread position: 131-665
Cow position: chr1:46836080-46835507 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 33

Conread position: 139-275
Cow position: chr1:73011242-73011108 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 37, 25

Conread position: 139-580
Cow position: chr1:102556587-102556137 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 287
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 161, 30

Conread position: 139-663
Cow position: chr1:82356250-82355715 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 25

Conread position: 139-672
Cow position: chr1:31330248-31330812 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 399
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 157, 25

Conread position: 139-672
Cow position: chr1:80555560-80556079 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 44

Conread position: 157-581
Cow position: chr1:98864644-98865071 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 21

Conread position: 271-548
Cow position: chr1:69922042-69922324 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 186
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 42, 49

Conread position: 271-598
Cow position: chr1:78290255-78289922 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 223
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 49

Conread position: 271-598
Cow position: chr1:79636542-79636872 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 224
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 37, 61

Conread position: 271-626
Cow position: chr1:21999561-21999929 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 243
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 34, 49

Conread position: 271-639
Cow position: chr1:56193536-56193918 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 252
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 89, 39

Conread position: 271-640
Cow position: chr1:57366736-57367119 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 255
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 34, 80

Conread position: 271-664
Cow position: chr1:49973795-49974201 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 271
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 49

Conread position: 271-664
Cow position: chr1:79456577-79456978 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 264
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 34, 79

Conread position: 271-672
Cow position: chr1:28873470-28873053 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 282
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 34, 49

Conread position: 271-672
Cow position: chr1:42736847-42736432 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 274
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 86

Conread position: 271-672
Cow position: chr1:57568349-57567926 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 280
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 32, 49

Conread position: 271-672
Cow position: chr1:73070660-73071081 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 277
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 34, 80

Conread position: 271-672
Cow position: chr1:82923783-82924202 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 270
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 49

Conread position: 271-672
Cow position: chr1:86698822-86699242 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 274
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 83, 48

Conread position: 272-582
Cow position: chr1:28723270-28722953 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 210
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 47

Conread position: 293-657
Cow position: chr1:19992313-19992689 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 159

Conread position: 293-672
Cow position: chr1:89770318-89770707 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 265
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 109, 46

Conread position: 294-664
Cow position: chr1:68607174-68607554 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 254
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 11, 33

Conread position: 297-582
Cow position: chr1:13646078-13645794 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 195
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 107, 44

Conread position: 297-582
Cow position: chr1:72657353-72657067 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 190
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 106, 44

Conread position: 297-626
Cow position: chr1:69537263-69536929 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 226
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 104, 44

Conread position: 297-664
Cow position: chr1:102434674-102435049 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 254
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 105, 28

Conread position: 298-670
Cow position: chr1:39481610-39482003 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 0

Conread position: 300-581
Cow position: chr1:44137977-44138263 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 214

Conread position: 302-582
Cow position: chr1:45098060-45097777 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 193
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 52, 17

Conread position: 302-660
Cow position: chr1:62853481-62853856 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 249
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 74, 12

Conread position: 304-583
Cow position: chr1:61309367-61309082 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 197
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 49, 42

Conread position: 306-672
Cow position: chr1:1460974-1461352 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 247
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 36

Conread position: 307-582
Cow position: chr1:87207073-87207347 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 187
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 95, 21

Conread position: 307-667
Cow position: chr1:33712420-33712044 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 253
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 95, 34

Conread position: 307-671
Cow position: chr1:67901567-67901944 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 252
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 12, 40

Conread position: 308-582
Cow position: chr1:89899350-89899621 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 187
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 98, 33

Conread position: 308-664
Cow position: chr1:63605426-63605792 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 250
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 25, 45

Conread position: 308-672
Cow position: chr1:38415153-38414776 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 254
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 94, 33

Conread position: 308-672
Cow position: chr1:82918309-82918686 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 254
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 94, 43

Conread position: 310-672
Cow position: chr1:93854881-93854496 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 259
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 47, 286

Conread position: 314-575
Cow position: chr1:33851631-33851366 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 13

Conread position: 314-583
Cow position: chr1:20829243-20828969 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 34, 12

Conread position: 314-666
Cow position: chr1:21356295-21356642 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 47

Conread position: 315-664
Cow position: chr1:33551264-33550908 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 248
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 87, 18

Conread position: 318-671
Cow position: chr1:79109620-79109269 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 252
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 247, 40

Conread position: 320-548
Cow position: chr1:40513031-40513264 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 48, 106

Conread position: 320-582
Cow position: chr1:55322707-55322976 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 29, 215

Conread position: 321-581
Cow position: chr1:72136987-72136721 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 189
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 34, 201

Conread position: 321-647
Cow position: chr1:34689690-34689349 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 234
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 34, 251

Conread position: 327-672
Cow position: chr1:99020619-99020980 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 88

Conread position: 330-672
Cow position: chr1:30027212-30027565 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 245
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 19, 121

Conread position: 331-598
Cow position: chr1:5502270-5501992 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 29, 17

Conread position: 346-672
Cow position: chr1:91718317-91718659 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 226
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 160

Conread position: 352-568
Cow position: chr1:17036241-17036463 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 352-583
Cow position: chr1:21087729-21087493 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 352-583
Cow position: chr1:29362612-29362376 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 0

Conread position: 352-583
Cow position: chr1:30283227-30283462 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 5, 167

Conread position: 352-583
Cow position: chr1:40574529-40574295 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 72

Conread position: 352-583
Cow position: chr1:56163642-56163406 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 5, 34

Conread position: 352-583
Cow position: chr1:56723470-56723235 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 5, 131

Conread position: 352-583
Cow position: chr1:59209823-59210059 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 352-583
Cow position: chr1:60339621-60339385 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 5, 167

Conread position: 352-583
Cow position: chr1:67834825-67835060 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 5, 19

Conread position: 352-583
Cow position: chr1:80358865-80359099 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 5, 117

Conread position: 352-583
Cow position: chr1:82564819-82564583 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 5, 167

Conread position: 352-583
Cow position: chr1:82652969-82652733 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 5, 0

Conread position: 352-583
Cow position: chr1:82912828-82913064 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 352-583
Cow position: chr1:89425889-89425667 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 5, 91

Conread position: 352-583
Cow position: chr1:91899312-91899078 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 5, 189

Conread position: 352-598
Cow position: chr1:39544085-39543830 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 183
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 5, 117

Conread position: 352-626
Cow position: chr1:13450522-13450235 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 177

Conread position: 352-664
Cow position: chr1:11291790-11292114 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 217
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 132

Conread position: 352-672
Cow position: chr1:69766778-69766438 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 230
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 5, 0

Conread position: 353-583
Cow position: chr1:71562260-71562494 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 353-598
Cow position: chr1:87245124-87244869 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 353-660
Cow position: chr1:99348724-99349048 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 224
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 49, 0

Conread position: 353-660
Cow position: chr1:101857673-101857996 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 106, 162

Conread position: 353-664
Cow position: chr1:76752338-76752664 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 220
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 7, 291

Conread position: 356-582
Cow position: chr1:88635681-88635452 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 145

Conread position: 356-582
Cow position: chr1:97226401-97226625 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 155
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 133

Conread position: 356-582
Cow position: chr1:101150143-101149913 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 356-583
Cow position: chr1:8554639-8554408 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 162

Conread position: 356-583
Cow position: chr1:18880082-18880313 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 162

Conread position: 356-583
Cow position: chr1:28711227-28710996 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 356-583
Cow position: chr1:31397001-31396770 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 356-583
Cow position: chr1:40684380-40684611 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 156
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 356-583
Cow position: chr1:62925924-62925693 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 162

Conread position: 356-583
Cow position: chr1:86547824-86548055 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 356-597
Cow position: chr1:17012428-17012678 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 356-664
Cow position: chr1:25179720-25180041 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 216
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 286

Conread position: 356-664
Cow position: chr1:62244337-62244658 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 223
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 46, 236

Conread position: 356-666
Cow position: chr1:57656854-57656528 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 221
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 104, 115

Conread position: 356-672
Cow position: chr1:40053666-40053331 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 224
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 356-672
Cow position: chr1:40308368-40308042 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 216
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 46, 89

Conread position: 356-672
Cow position: chr1:42290693-42290369 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 216
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 46, 89

Conread position: 356-672
Cow position: chr1:79335494-79335829 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 46, 286

Conread position: 357-672
Cow position: chr1:18405888-18406217 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 217
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 45, 83

Conread position: 358-662
Cow position: chr1:52358969-52359284 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 232

Conread position: 359-626
Cow position: chr1:85882309-85882030 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 83

Conread position: 359-626
Cow position: chr1:94659989-94659713 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 170

Conread position: 359-641
Cow position: chr1:100597066-100597361 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 197
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 283

Conread position: 359-664
Cow position: chr1:56144031-56144348 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 211
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 201

Conread position: 359-664
Cow position: chr1:58336142-58335826 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 220
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 42, 280

Conread position: 359-664
Cow position: chr1:72981574-72981257 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 215
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 282

Conread position: 359-664
Cow position: chr1:88131078-88130760 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 43, 283

Conread position: 359-672
Cow position: chr1:52232808-52233136 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 227
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 42, 81

Conread position: 359-672
Cow position: chr1:58883760-58884092 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 227
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 283

Conread position: 359-672
Cow position: chr1:76622650-76622982 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 228
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 43, 233

Conread position: 359-672
Cow position: chr1:91892816-91893143 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 221
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 131

Conread position: 360-583
Cow position: chr1:95239676-95239449 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 158

Conread position: 366-672
Cow position: chr1:8825350-8825026 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 225
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 35, 20

Conread position: 369-583
Cow position: chr1:56490138-56489920 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 33, 149

Conread position: 370-657
Cow position: chr1:25886866-25887166 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 206
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 32, 273

Conread position: 370-672
Cow position: chr1:52918332-52918644 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 30, 85

Conread position: 373-582
Cow position: chr1:84149712-84149501 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 24, 142

Conread position: 379-583
Cow position: chr1:85791974-85791766 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 379-639
Cow position: chr1:12061909-12062179 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 180
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 379-664
Cow position: chr1:72186590-72186883 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 202
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 23, 66

Conread position: 385-626
Cow position: chr1:99911240-99910988 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 202

Conread position: 385-664
Cow position: chr1:48246095-48245801 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 200
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 253

Conread position: 401-583
Cow position: chr1:55276220-55276406 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 401-596
Cow position: chr1:98661046-98661250 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 21

Conread position: 402-666
Cow position: chr1:15026149-15025879 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 182, 39

Conread position: 409-670
Cow position: chr1:18244128-18244402 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 50, 109

Conread position: 419-672
Cow position: chr1:33388539-33388280 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 202
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 34, 151

Show alignments to all cow chromosomes.