Cow genome map


           Conread name:
           Lym2-sn01_E07.f
        

               Conread position:
               1-646
               

               Cow position:
               
               

               Alignm length:
               689
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 43
               

               Conread position:
               3-672
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               426
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               78, 120
               

               Conread position:
               80-394
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               48, 36
               

               Conread position:
               80-667
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 128
               

               Conread position:
               137-422
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 34
               

               Conread position:
               139-388
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               37, 25
               

               Conread position:
               139-440
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               169, 33
               

               Conread position:
               158-553
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 37
               

               Conread position:
               158-672
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 37
               

               Conread position:
               178-624
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 11
               

               Conread position:
               266-664
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 81
               

               Conread position:
               271-597
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               270
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               271-665
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               271
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               62, 69
               

               Conread position:
               288-664
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               260
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               114, 38
               

               Conread position:
               298-613
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               303-563
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 51
               

               Conread position:
               307-582
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               95, 21
               

               Conread position:
               307-657
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               239
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               17, 51
               

               Conread position:
               307-672
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               70, 21
               

               Conread position:
               319-579
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               320-582
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               20, 97
               

               Conread position:
               320-666
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               39, 19
               

               Conread position:
               321-563
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               11, 200
               

               Conread position:
               334-639
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               10, 19
               

               Conread position:
               334-664
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               68, 14
               

               Conread position:
               352-579
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-582
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-582
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               5, 204
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               5, 212
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               5, 180
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               5, 31
               

               Conread position:
               352-626
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               5, 223
               

               Conread position:
               353-582
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               353-660
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               49, 69
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 159
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               46, 108
               

               Conread position:
               359-556
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               41, 31
               

               Conread position:
               359-660
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               43, 283
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               43, 101
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               43, 283
               

               Conread position:
               359-672
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               43, 235
               

               Conread position:
               359-672
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               359-672
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               43, 283
               

               Conread position:
               359-672
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               43, 283
               

               Conread position:
               359-672
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               366-582
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               367-641
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               37, 74
               

               Conread position:
               376-609
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               26, 184
               

               Conread position:
               379-582
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               381-660
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               391-626
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               400-569
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               69, 58
               

               Conread position:
               406-666
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 110
               

               Conread position:
               427-582
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               485-672
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               106, 28
               
Show alignments to all cow chromosomes.