Cow genome map
| Conread name: | Lym2-sn01_E07.f |
| Conread position: | 1-646 |
| Cow position: | chr10:6260087-6260764 (view UCSC Genome Browser custom track) |
| Alignm length: | 689 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 43 |
| Conread position: | 3-672 |
| Cow position: | chr10:38848028-38847366 (view UCSC Genome Browser custom track) |
| Alignm length: | 692 |
| Alignm identity: | 426 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 78, 120 |
| Conread position: | 80-394 |
| Cow position: | chr10:64288448-64288753 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 219 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 48, 36 |
| Conread position: | 80-667 |
| Cow position: | chr10:24977521-24978127 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 128 |
| Conread position: | 137-422 |
| Cow position: | chr10:24312409-24312703 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 34 |
| Conread position: | 139-388 |
| Cow position: | chr10:60205558-60205807 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 37, 25 |
| Conread position: | 139-440 |
| Cow position: | chr10:28115935-28116234 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 169, 33 |
| Conread position: | 158-553 |
| Cow position: | chr10:39880517-39880916 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 37 |
| Conread position: | 158-672 |
| Cow position: | chr10:11820868-11820332 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 37 |
| Conread position: | 178-624 |
| Cow position: | chr10:20397213-20396785 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 11 |
| Conread position: | 266-664 |
| Cow position: | chr10:21076783-21076377 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 81 |
| Conread position: | 271-597 |
| Cow position: | chr10:21487335-21486997 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 271-664 |
| Cow position: | chr10:124730-124323 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 270 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 271-664 |
| Cow position: | chr10:39040882-39041287 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 271-665 |
| Cow position: | chr10:16925950-16925547 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 271 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 62, 69 |
| Conread position: | 288-664 |
| Cow position: | chr10:37770219-37769836 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 114, 38 |
| Conread position: | 298-613 |
| Cow position: | chr10:23432207-23431876 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 303-563 |
| Cow position: | chr10:53364351-53364086 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 51 |
| Conread position: | 307-582 |
| Cow position: | chr10:62778727-62778451 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 192 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 95, 21 |
| Conread position: | 307-657 |
| Cow position: | chr10:46191740-46191381 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 17, 51 |
| Conread position: | 307-672 |
| Cow position: | chr10:62216986-62216606 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 70, 21 |
| Conread position: | 319-579 |
| Cow position: | chr10:42628998-42628730 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 320-582 |
| Cow position: | chr10:8327897-8328169 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 320-666 |
| Cow position: | chr10:40752017-40751656 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 39, 19 |
| Conread position: | 321-563 |
| Cow position: | chr10:31524172-31523922 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 11, 200 |
| Conread position: | 334-639 |
| Cow position: | chr10:62408502-62408814 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 10, 19 |
| Conread position: | 334-664 |
| Cow position: | chr10:22101584-22101245 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 68, 14 |
| Conread position: | 352-579 |
| Cow position: | chr10:47907117-47906885 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 352-582 |
| Cow position: | chr10:4191887-4192129 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 352-582 |
| Cow position: | chr10:19495947-19496182 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 352-583 |
| Cow position: | chr10:280282-280517 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 5, 204 |
| Conread position: | 352-583 |
| Cow position: | chr10:14804175-14803938 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 352-583 |
| Cow position: | chr10:21400332-21400568 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 352-583 |
| Cow position: | chr10:21740413-21740648 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 5, 212 |
| Conread position: | 352-583 |
| Cow position: | chr10:25564919-25565155 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 352-583 |
| Cow position: | chr10:39817024-39817260 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 352-583 |
| Cow position: | chr10:41157786-41157551 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 5, 180 |
| Conread position: | 352-583 |
| Cow position: | chr10:41567441-41567210 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 5, 31 |
| Conread position: | 352-626 |
| Cow position: | chr10:39180122-39179834 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 5, 223 |
| Conread position: | 353-582 |
| Cow position: | chr10:25498689-25498456 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 353-660 |
| Cow position: | chr10:29696568-29696248 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 49, 69 |
| Conread position: | 356-583 |
| Cow position: | chr10:19758682-19758454 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 46, 159 |
| Conread position: | 356-583 |
| Cow position: | chr10:51952288-51952515 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 46, 108 |
| Conread position: | 359-556 |
| Cow position: | chr10:57989663-57989859 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 41, 31 |
| Conread position: | 359-660 |
| Cow position: | chr10:2122931-2123242 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 43, 283 |
| Conread position: | 359-664 |
| Cow position: | chr10:8290309-8289996 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 43, 101 |
| Conread position: | 359-664 |
| Cow position: | chr10:38345031-38345349 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 43, 283 |
| Conread position: | 359-672 |
| Cow position: | chr10:1375864-1375534 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 43, 235 |
| Conread position: | 359-672 |
| Cow position: | chr10:11685340-11685668 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 359-672 |
| Cow position: | chr10:19511937-19511605 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 43, 283 |
| Conread position: | 359-672 |
| Cow position: | chr10:25359730-25359398 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 43, 283 |
| Conread position: | 359-672 |
| Cow position: | chr10:32651064-32650732 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 366-582 |
| Cow position: | chr10:33346924-33346704 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 367-641 |
| Cow position: | chr10:41389222-41389506 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 37, 74 |
| Conread position: | 376-609 |
| Cow position: | chr10:7282373-7282614 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 184 |
| Conread position: | 379-582 |
| Cow position: | chr10:13365559-13365766 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 381-660 |
| Cow position: | chr10:46694067-46694364 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 391-626 |
| Cow position: | chr10:38538194-38538447 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 400-569 |
| Cow position: | chr10:64288994-64289169 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 69, 58 |
| Conread position: | 406-666 |
| Cow position: | chr10:24313553-24313825 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 110 |
| Conread position: | 427-582 |
| Cow position: | chr10:29632601-29632759 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 485-672 |
| Cow position: | chr10:28116235-28116427 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 106, 28 |
Show alignments to all cow chromosomes.