Cow genome map

Conread name: Lym2-sn01_E07.f

Conread position: 1-271
Cow position: chr13:22185210-22185496 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 208
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 55, 206

Conread position: 1-364
Cow position: chr13:34048646-34048250 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 15

Conread position: 83-672
Cow position: chr13:21131637-21131030 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 23

Conread position: 139-564
Cow position: chr13:16342958-16343385 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 283
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 84, 12

Conread position: 141-661
Cow position: chr13:60701036-60701570 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 355
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 90, 28

Conread position: 238-672
Cow position: chr13:31561346-31560893 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 24

Conread position: 245-508
Cow position: chr13:43850015-43850278 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 125, 31

Conread position: 271-626
Cow position: chr13:4483919-4483559 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 246
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 85

Conread position: 271-664
Cow position: chr13:4941211-4940804 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 270
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 11

Conread position: 271-664
Cow position: chr13:15924260-15924667 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 276
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 34, 80

Conread position: 271-664
Cow position: chr13:35757365-35756958 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 263
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 57, 90

Conread position: 272-582
Cow position: chr13:34937274-34936955 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 208
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 83, 90

Conread position: 297-670
Cow position: chr13:34693259-34692868 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 260
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 105, 44

Conread position: 308-670
Cow position: chr13:3277238-3276863 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 258
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 94, 33

Conread position: 320-672
Cow position: chr13:54284643-54284284 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 240
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 29

Conread position: 352-560
Cow position: chr13:3058067-3058281 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 5, 168

Conread position: 352-562
Cow position: chr13:60466380-60466165 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 5, 167

Conread position: 352-583
Cow position: chr13:2388775-2389011 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 352-583
Cow position: chr13:4873118-4872884 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 50, 115

Conread position: 352-583
Cow position: chr13:17308518-17308282 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 5, 110

Conread position: 352-583
Cow position: chr13:21840151-21840387 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 161
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 352-583
Cow position: chr13:49973727-49973491 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 352-583
Cow position: chr13:50109505-50109269 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 5, 0

Conread position: 352-626
Cow position: chr13:13324792-13324503 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 200
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 5, 0

Conread position: 352-672
Cow position: chr13:30141047-30140698 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 248
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 55, 18

Conread position: 353-582
Cow position: chr13:56730246-56730477 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 49, 63

Conread position: 353-598
Cow position: chr13:4178610-4178865 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 353-625
Cow position: chr13:46732187-46732466 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 65

Conread position: 353-626
Cow position: chr13:9044543-9044255 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 201
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 7, 62

Conread position: 354-582
Cow position: chr13:34142616-34142851 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 356-582
Cow position: chr13:62327546-62327776 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 356-597
Cow position: chr13:32986019-32986270 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 175
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 356-672
Cow position: chr13:30656939-30657265 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 216
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 71

Conread position: 356-672
Cow position: chr13:31612298-31612632 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 234
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 46, 110

Conread position: 356-672
Cow position: chr13:34325637-34325972 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 228
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 46, 161

Conread position: 358-670
Cow position: chr13:31832637-31832305 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 227
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 0

Conread position: 359-582
Cow position: chr13:33824700-33824923 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 152
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 101

Conread position: 359-664
Cow position: chr13:1593120-1593436 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 216
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 43, 280

Conread position: 359-664
Cow position: chr13:15520480-15520798 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 224
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 43, 231

Conread position: 359-664
Cow position: chr13:32737787-32738103 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 215
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 43, 79

Conread position: 359-672
Cow position: chr13:22185705-22186029 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 8

Conread position: 366-672
Cow position: chr13:34186659-34186984 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 213
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 379-672
Cow position: chr13:2908434-2908747 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 214
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 381-583
Cow position: chr13:47229974-47230180 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 447-626
Cow position: chr13:33336400-33336588 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 118, 12

Show alignments to all cow chromosomes.