Cow genome map


           Conread name:
           Lym2-sn01_E07.f
        

               Conread position:
               3-672
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 24
               

               Conread position:
               3-672
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 15
               

               Conread position:
               85-672
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 51
               

               Conread position:
               125-562
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               297
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               41, 119
               

               Conread position:
               139-671
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               388
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               34, 12
               

               Conread position:
               139-672
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 61
               

               Conread position:
               146-367
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 46
               

               Conread position:
               151-672
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               373
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               31, 13
               

               Conread position:
               240-582
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 94
               

               Conread position:
               262-563
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               43, 57
               

               Conread position:
               271-575
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               83, 40
               

               Conread position:
               271-626
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               34, 80
               

               Conread position:
               271-641
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               34, 20
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               263
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               264
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               290-581
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               112, 28
               

               Conread position:
               291-672
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               274
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               111, 28
               

               Conread position:
               297-582
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               105, 44
               

               Conread position:
               297-672
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               258
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               36, 56
               

               Conread position:
               301-639
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               302-582
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               99, 23
               

               Conread position:
               302-626
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               38, 18
               

               Conread position:
               304-582
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               24, 63
               

               Conread position:
               307-660
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               253
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               94, 34
               

               Conread position:
               309-662
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               59, 19
               

               Conread position:
               311-582
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               91, 19
               

               Conread position:
               320-576
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               35, 178
               

               Conread position:
               320-639
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               35, 70
               

               Conread position:
               320-671
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               248
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               29, 105
               

               Conread position:
               331-664
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               36, 112
               

               Conread position:
               333-672
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 141
               

               Conread position:
               339-564
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               63, 18
               

               Conread position:
               352-561
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               43, 18
               

               Conread position:
               352-563
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               352-582
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               49, 209
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               5, 167
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               5, 117
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               5, 123
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               5, 117
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               5, 196
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               5, 167
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               5, 110
               

               Conread position:
               352-626
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               5, 31
               

               Conread position:
               353-574
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               353-582
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               49, 29
               

               Conread position:
               353-626
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               11, 169
               

               Conread position:
               353-660
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               49, 261
               

               Conread position:
               353-672
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               46, 162
               

               Conread position:
               356-667
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               46, 144
               

               Conread position:
               358-672
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               229
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               359-598
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               43, 181
               

               Conread position:
               359-609
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               44, 233
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               43, 13
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               43, 283
               

               Conread position:
               359-667
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               43, 210
               

               Conread position:
               359-667
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               360-626
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               365-642
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               366-568
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               36, 65
               

               Conread position:
               370-662
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 267
               

               Conread position:
               372-664
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 188
               

               Conread position:
               379-582
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               379-670
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               23, 239
               

               Conread position:
               380-537
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               17, 70
               

               Conread position:
               389-672
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               18, 42
               

               Conread position:
               401-574
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               45, 54
               

               Conread position:
               401-581
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               402-582
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               72, 56
               
Show alignments to all cow chromosomes.