Cow genome map


           Conread name:
           Lym2-sn01_E07.f
        

               Conread position:
               1-544
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 47
               

               Conread position:
               1-563
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               377
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               63, 38
               

               Conread position:
               3-438
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               318
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               50, 185
               

               Conread position:
               81-671
               

               Cow position:
               
               

               Alignm length:
               640
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 91
               

               Conread position:
               85-614
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 126
               

               Conread position:
               112-667
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               391
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               22, 6
               

               Conread position:
               139-396
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               122, 24
               

               Conread position:
               139-662
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 56
               

               Conread position:
               140-672
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               357
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               32, 57
               

               Conread position:
               147-671
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 116
               

               Conread position:
               271-626
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               271-640
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               42, 85
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               273
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               269
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               271
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               34, 48
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               267
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               34, 92
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               259
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               34, 80
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               29, 80
               

               Conread position:
               271-667
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               278
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               35, 49
               

               Conread position:
               271-672
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               100, 40
               

               Conread position:
               273-664
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               266
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               80, 38
               

               Conread position:
               282-582
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               7, 30
               

               Conread position:
               283-582
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               119, 22
               

               Conread position:
               293-660
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               255
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               109, 48
               

               Conread position:
               297-580
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               105, 44
               

               Conread position:
               297-582
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               105, 44
               

               Conread position:
               297-589
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               105, 49
               

               Conread position:
               297-672
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               110, 44
               

               Conread position:
               297-672
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               261
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               105, 29
               

               Conread position:
               298-647
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               270
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               12, 45
               

               Conread position:
               299-672
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               103, 42
               

               Conread position:
               301-549
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               54, 13
               

               Conread position:
               302-583
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               55, 12
               

               Conread position:
               305-582
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               27, 9
               

               Conread position:
               307-574
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               95, 21
               

               Conread position:
               307-582
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               63, 17
               

               Conread position:
               308-598
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               94, 33
               

               Conread position:
               318-597
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               320-523
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               320-563
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               320-639
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               20, 323
               

               Conread position:
               320-672
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 203
               

               Conread position:
               320-672
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 41
               

               Conread position:
               320-672
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               246
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               30, 73
               

               Conread position:
               321-672
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 187
               

               Conread position:
               335-659
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               235
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               67, 32
               

               Conread position:
               340-598
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               62, 26
               

               Conread position:
               352-579
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               5, 188
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               5, 86
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               5, 168
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               5, 167
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               5, 167
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-642
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               5, 117
               

               Conread position:
               352-672
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               5, 167
               

               Conread position:
               353-582
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               49, 124
               

               Conread position:
               353-672
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               50, 107
               

               Conread position:
               355-664
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               47, 289
               

               Conread position:
               356-582
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               356-582
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               46, 161
               

               Conread position:
               356-582
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               46, 161
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               47, 143
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               46, 109
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               356-626
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               356-626
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               48, 260
               

               Conread position:
               356-639
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               356-662
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               226
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               46, 258
               

               Conread position:
               356-672
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               46, 253
               

               Conread position:
               356-672
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               45, 145
               

               Conread position:
               359-583
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               43, 159
               

               Conread position:
               359-583
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               43, 109
               

               Conread position:
               359-662
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               43, 282
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               43, 283
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               43, 283
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               86, 101
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               43, 159
               

               Conread position:
               359-672
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               219
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               42, 174
               

               Conread position:
               359-672
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               359-672
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               360-583
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               42, 160
               

               Conread position:
               366-563
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               36, 59
               

               Conread position:
               366-576
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               366-582
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               35, 151
               

               Conread position:
               370-582
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               40, 106
               

               Conread position:
               372-672
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               78, 43
               

               Conread position:
               379-672
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               25, 168
               

               Conread position:
               402-609
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               48, 24
               

               Conread position:
               409-598
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               417-583
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               427-665
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               31, 69
               

               Conread position:
               453-672
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               7, 17
               
Show alignments to all cow chromosomes.