Cow genome map
Conread name: | Lym2-sn01_E07.f |
Conread position: | 9-672 |
Cow position: | chr16:28437853-28438550 (view UCSC Genome Browser custom track) |
Alignm length: | 712 |
Alignm identity: | 504 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 211 |
Conread position: | 80-299 |
Cow position: | chr16:25170793-25170571 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 163 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 14, 42 |
Conread position: | 142-672 |
Cow position: | chr16:24154676-24155207 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 53 |
Conread position: | 237-525 |
Cow position: | chr16:48626942-48626629 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 216 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 22, 114 |
Conread position: | 262-672 |
Cow position: | chr16:49256917-49257350 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 281 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 92, 48 |
Conread position: | 271-598 |
Cow position: | chr16:10203779-10204114 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 227 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 5, 57 |
Conread position: | 271-645 |
Cow position: | chr16:25457811-25458206 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 260 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 34, 80 |
Conread position: | 271-664 |
Cow position: | chr16:5483973-5483570 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 269 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 34, 49 |
Conread position: | 271-664 |
Cow position: | chr16:12538272-12538676 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 265 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 34, 79 |
Conread position: | 271-664 |
Cow position: | chr16:23252852-23253257 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 265 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 34, 50 |
Conread position: | 271-664 |
Cow position: | chr16:23982964-23982559 (view UCSC Genome Browser custom track) |
Alignm length: | 412 |
Alignm identity: | 273 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 34, 84 |
Conread position: | 271-664 |
Cow position: | chr16:25341619-25341216 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 267 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 69, 48 |
Conread position: | 271-664 |
Cow position: | chr16:25441278-25440865 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 271 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 34, 80 |
Conread position: | 271-672 |
Cow position: | chr16:2483486-2483905 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 266 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 83, 375 |
Conread position: | 271-672 |
Cow position: | chr16:10437895-10437476 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 280 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 93, 29 |
Conread position: | 272-664 |
Cow position: | chr16:407379-407787 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 270 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 33, 48 |
Conread position: | 290-672 |
Cow position: | chr16:14666198-14666596 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 271 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 13, 37 |
Conread position: | 297-654 |
Cow position: | chr16:2411345-2411712 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 242 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 36, 45 |
Conread position: | 297-672 |
Cow position: | chr16:40296555-40296941 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 251 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 104, 29 |
Conread position: | 304-672 |
Cow position: | chr16:836651-836263 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 256 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 50, 11 |
Conread position: | 307-591 |
Cow position: | chr16:19713275-19713555 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 195 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 95, 34 |
Conread position: | 307-649 |
Cow position: | chr16:41560271-41559919 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 240 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 43, 63 |
Conread position: | 308-664 |
Cow position: | chr16:26663361-26662996 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 243 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 94, 25 |
Conread position: | 311-606 |
Cow position: | chr16:41757833-41758139 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 9 |
Conread position: | 320-657 |
Cow position: | chr16:335893-335545 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 238 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 11, 27 |
Conread position: | 320-657 |
Cow position: | chr16:9930147-9929794 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 234 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 29, 108 |
Conread position: | 320-660 |
Cow position: | chr16:42739816-42740173 (view UCSC Genome Browser custom track) |
Alignm length: | 361 |
Alignm identity: | 244 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 12, 41 |
Conread position: | 321-557 |
Cow position: | chr16:52814884-52815124 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 166 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 28, 40 |
Conread position: | 321-582 |
Cow position: | chr16:13018703-13018438 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 187 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 49, 37 |
Conread position: | 337-671 |
Cow position: | chr16:25085209-25084856 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 232 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 7, 237 |
Conread position: | 352-583 |
Cow position: | chr16:32311-32077 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 162 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 5, 146 |
Conread position: | 352-620 |
Cow position: | chr16:28170790-28171069 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 190 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 5, 166 |
Conread position: | 352-664 |
Cow position: | chr16:15566316-15565997 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 217 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 50, 137 |
Conread position: | 352-672 |
Cow position: | chr16:5661423-5661094 (view UCSC Genome Browser custom track) |
Alignm length: | 333 |
Alignm identity: | 227 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 5, 117 |
Conread position: | 352-672 |
Cow position: | chr16:25294402-25294076 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 45, 198 |
Conread position: | 352-672 |
Cow position: | chr16:51686012-51685675 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 256 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 76 |
Conread position: | 353-580 |
Cow position: | chr16:39821201-39820972 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 165 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 49, 124 |
Conread position: | 355-672 |
Cow position: | chr16:31592338-31592671 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 230 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 47, 67 |
Conread position: | 356-582 |
Cow position: | chr16:20254743-20254973 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 161 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 356-583 |
Cow position: | chr16:25188210-25187980 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 162 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 46, 131 |
Conread position: | 356-583 |
Cow position: | chr16:53045922-53045690 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 161 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 46, 162 |
Conread position: | 359-578 |
Cow position: | chr16:43897706-43897925 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 154 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 43, 63 |
Conread position: | 359-664 |
Cow position: | chr16:1567889-1568207 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 218 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 43, 233 |
Conread position: | 359-664 |
Cow position: | chr16:8816539-8816857 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 227 |
Alignm E-value: | 8e-39 |
Alignm gaps (pig, cow): | 43, 233 |
Conread position: | 359-664 |
Cow position: | chr16:29046587-29046269 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 213 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 43, 283 |
Conread position: | 359-672 |
Cow position: | chr16:15492274-15491942 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 219 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 43, 284 |
Conread position: | 366-598 |
Cow position: | chr16:11052718-11052478 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 172 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 36, 94 |
Conread position: | 369-563 |
Cow position: | chr16:25156668-25156865 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 141 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 33, 126 |
Conread position: | 370-639 |
Cow position: | chr16:5919037-5918757 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 189 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 32, 148 |
Conread position: | 370-657 |
Cow position: | chr16:33611523-33611830 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 211 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 32, 151 |
Conread position: | 372-639 |
Cow position: | chr16:9777637-9777357 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 189 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 30, 263 |
Conread position: | 373-664 |
Cow position: | chr16:27734251-27734556 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 215 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 29, 270 |
Conread position: | 384-671 |
Cow position: | chr16:25167203-25166917 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 225 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 148 |
Conread position: | 401-670 |
Cow position: | chr16:16030306-16030023 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 194 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 55, 237 |
Show alignments to all cow chromosomes.