Cow genome map


           Conread name:
           Lym2-sn01_E07.f
        

               Conread position:
               9-672
               

               Cow position:
               
               

               Alignm length:
               712
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 211
               

               Conread position:
               80-299
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               14, 42
               

               Conread position:
               142-672
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 53
               

               Conread position:
               237-525
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               22, 114
               

               Conread position:
               262-672
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               281
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               92, 48
               

               Conread position:
               271-598
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               5, 57
               

               Conread position:
               271-645
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               260
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               34, 80
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               269
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               265
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               34, 79
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               34, 50
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               34, 84
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               69, 48
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               34, 80
               

               Conread position:
               271-672
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               266
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               83, 375
               

               Conread position:
               271-672
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               280
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               93, 29
               

               Conread position:
               272-664
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               33, 48
               

               Conread position:
               290-672
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               271
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               13, 37
               

               Conread position:
               297-654
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               36, 45
               

               Conread position:
               297-672
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               104, 29
               

               Conread position:
               304-672
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               50, 11
               

               Conread position:
               307-591
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               95, 34
               

               Conread position:
               307-649
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               43, 63
               

               Conread position:
               308-664
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               94, 25
               

               Conread position:
               311-606
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 9
               

               Conread position:
               320-657
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               11, 27
               

               Conread position:
               320-657
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               29, 108
               

               Conread position:
               320-660
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               12, 41
               

               Conread position:
               321-557
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               28, 40
               

               Conread position:
               321-582
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               49, 37
               

               Conread position:
               337-671
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               7, 237
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               5, 146
               

               Conread position:
               352-620
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               5, 166
               

               Conread position:
               352-664
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               50, 137
               

               Conread position:
               352-672
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               5, 117
               

               Conread position:
               352-672
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 198
               

               Conread position:
               352-672
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 76
               

               Conread position:
               353-580
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               49, 124
               

               Conread position:
               355-672
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               47, 67
               

               Conread position:
               356-582
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               46, 131
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               46, 162
               

               Conread position:
               359-578
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 63
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               43, 233
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               227
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               43, 233
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               43, 283
               

               Conread position:
               359-672
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               43, 284
               

               Conread position:
               366-598
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               36, 94
               

               Conread position:
               369-563
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 126
               

               Conread position:
               370-639
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               32, 148
               

               Conread position:
               370-657
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               32, 151
               

               Conread position:
               372-639
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 263
               

               Conread position:
               373-664
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               29, 270
               

               Conread position:
               384-671
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 148
               

               Conread position:
               401-670
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               55, 237
               
Show alignments to all cow chromosomes.