Cow genome map

Conread name: Lym2-sn01_E07.f

Conread position: 1-667
Cow position: chr19:32182736-32183426 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 220

Conread position: 3-626
Cow position: chr19:17019172-17018544 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 63

Conread position: 80-667
Cow position: chr19:7449372-7449989 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 96

Conread position: 138-582
Cow position: chr19:30755759-30755309 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 294
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 72, 15

Conread position: 178-394
Cow position: chr19:42298024-42298258 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 92, 17

Conread position: 208-672
Cow position: chr19:20110763-20111205 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 68

Conread position: 265-672
Cow position: chr19:10671857-10672283 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 286
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 40, 55

Conread position: 271-626
Cow position: chr19:39390952-39390582 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 244
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 58

Conread position: 271-664
Cow position: chr19:33942054-33941649 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 270
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 34, 80

Conread position: 271-672
Cow position: chr19:172655-172234 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 280
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 49

Conread position: 271-672
Cow position: chr19:33873870-33873450 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 275
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 34, 80

Conread position: 297-582
Cow position: chr19:417074-416789 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 193
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 105, 44

Conread position: 297-672
Cow position: chr19:893195-893590 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 268
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 59

Conread position: 297-672
Cow position: chr19:40852025-40852407 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 260
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 104, 31

Conread position: 302-672
Cow position: chr19:687475-687088 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 257
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 53, 12

Conread position: 306-672
Cow position: chr19:32223032-32223416 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 250
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 199

Conread position: 320-576
Cow position: chr19:42648719-42648978 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 48, 104

Conread position: 320-666
Cow position: chr19:32203138-32202776 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 253
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 14, 202

Conread position: 321-664
Cow position: chr19:42249196-42248841 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 253
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 58, 37

Conread position: 321-667
Cow position: chr19:6553991-6553639 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 232
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 50, 20

Conread position: 322-657
Cow position: chr19:15954228-15953893 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 236
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 38

Conread position: 348-639
Cow position: chr19:2274007-2274313 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 352-583
Cow position: chr19:7342431-7342195 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 352-583
Cow position: chr19:32211710-32211946 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 168
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 5, 123

Conread position: 352-583
Cow position: chr19:43144079-43143843 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 5, 117

Conread position: 352-583
Cow position: chr19:52151467-52151704 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 5, 0

Conread position: 353-553
Cow position: chr19:28376847-28376641 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 356-583
Cow position: chr19:170389-170619 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 173

Conread position: 356-583
Cow position: chr19:772957-772726 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 0

Conread position: 356-597
Cow position: chr19:38253-38003 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 45, 191

Conread position: 356-649
Cow position: chr19:1032433-1032130 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 211
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 46, 278

Conread position: 359-561
Cow position: chr19:204316-204110 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 359-598
Cow position: chr19:75914-76162 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 359-672
Cow position: chr19:28581306-28581633 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 218
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 10

Conread position: 359-672
Cow position: chr19:35377136-35376818 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 212
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 43, 103

Conread position: 369-583
Cow position: chr19:20105058-20104839 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 372-664
Cow position: chr19:7488655-7488350 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 208
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 30, 270

Conread position: 376-626
Cow position: chr19:439319-439569 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 124

Conread position: 409-583
Cow position: chr19:32244988-32244811 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 51, 108

Conread position: 426-672
Cow position: chr19:42299209-42299476 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 32, 0

Conread position: 464-666
Cow position: chr19:7405230-7405437 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 118, 49

Show alignments to all cow chromosomes.