Cow genome map


           Conread name:
           Lym2-sn01_E07.f
        

               Conread position:
               1-548
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 36
               

               Conread position:
               1-662
               

               Cow position:
               
               

               Alignm length:
               717
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 15
               

               Conread position:
               1-672
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 164
               

               Conread position:
               3-664
               

               Cow position:
               
               

               Alignm length:
               698
               

               Alignm identity:
               449
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               45, 120
               

               Conread position:
               80-664
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 25
               

               Conread position:
               139-672
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 53
               

               Conread position:
               140-672
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 54
               

               Conread position:
               147-672
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 8
               

               Conread position:
               158-639
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               179-455
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               179-672
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 10
               

               Conread position:
               190-647
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 34
               

               Conread position:
               220-671
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 191
               

               Conread position:
               264-582
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               41, 18
               

               Conread position:
               270-672
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               274
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               53, 62
               

               Conread position:
               271-660
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               262
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               34, 80
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               42, 80
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               266
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               34, 80
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               269
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               131, 29
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               34, 80
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               271-670
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               99, 40
               

               Conread position:
               271-671
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               34, 11
               

               Conread position:
               272-568
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               130, 67
               

               Conread position:
               278-582
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               124, 22
               

               Conread position:
               282-664
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               72, 18
               

               Conread position:
               285-664
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               264
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               289-672
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 158
               

               Conread position:
               290-672
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               112, 25
               

               Conread position:
               292-514
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               13, 122
               

               Conread position:
               297-580
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               105, 44
               

               Conread position:
               297-582
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               105, 44
               

               Conread position:
               297-664
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               36, 45
               

               Conread position:
               297-664
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               36, 50
               

               Conread position:
               301-583
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               56, 13
               

               Conread position:
               302-670
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               55, 12
               

               Conread position:
               302-672
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               247
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               12, 41
               

               Conread position:
               304-670
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               19, 25
               

               Conread position:
               306-626
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               48, 271
               

               Conread position:
               306-672
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               257
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               96, 22
               

               Conread position:
               307-542
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               16, 68
               

               Conread position:
               308-582
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               94, 33
               

               Conread position:
               308-598
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               85, 20
               

               Conread position:
               308-672
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               25, 32
               

               Conread position:
               315-672
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 43
               

               Conread position:
               318-582
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               20, 42
               

               Conread position:
               318-660
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               13, 147
               

               Conread position:
               320-563
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               320-568
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               45, 29
               

               Conread position:
               320-648
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               39, 7
               

               Conread position:
               320-672
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               29, 49
               

               Conread position:
               320-672
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               253
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               39, 19
               

               Conread position:
               321-649
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               352-563
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               5, 35
               

               Conread position:
               352-568
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               5, 167
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               5, 73
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               5, 115
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               5, 167
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-626
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               5, 150
               

               Conread position:
               352-626
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-672
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               353-579
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               48, 78
               

               Conread position:
               353-625
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               49, 109
               

               Conread position:
               353-627
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               14, 109
               

               Conread position:
               353-671
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               53, 87
               

               Conread position:
               353-672
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               14, 178
               

               Conread position:
               353-672
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               49, 87
               

               Conread position:
               355-598
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 70
               

               Conread position:
               356-575
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               356-575
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               46, 162
               

               Conread position:
               356-582
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               47, 104
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               46, 158
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               46, 162
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               46, 111
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               46, 162
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               46, 162
               

               Conread position:
               356-660
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               356-670
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               46, 71
               

               Conread position:
               359-574
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               359-577
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 81
               

               Conread position:
               359-583
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               43, 159
               

               Conread position:
               359-589
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               43, 140
               

               Conread position:
               359-598
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               43, 235
               

               Conread position:
               359-625
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               43, 187
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               43, 140
               

               Conread position:
               363-582
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               39, 85
               

               Conread position:
               366-583
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 101
               

               Conread position:
               366-583
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               372-582
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               32, 146
               

               Conread position:
               376-664
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               26, 269
               

               Conread position:
               376-672
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 65
               

               Conread position:
               379-568
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               388-647
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               14, 252
               

               Conread position:
               406-671
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               55, 16
               

               Conread position:
               411-647
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               29, 148
               

               Conread position:
               426-670
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               454-672
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               128, 89
               

               Conread position:
               460-657
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               124, 74
               

               Conread position:
               470-672
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               114, 168
               
Show alignments to all cow chromosomes.