Cow genome map
| Conread name: | Lym2-sn01_E07.f |
| Conread position: | 3-397 |
| Cow position: | chr20:10840408-10840816 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 44, 74 |
| Conread position: | 80-263 |
| Cow position: | chr20:24518238-24518052 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 42, 89 |
| Conread position: | 80-667 |
| Cow position: | chr20:13434330-13434945 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 152 |
| Conread position: | 226-627 |
| Cow position: | chr20:29948937-29948529 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 273 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 20, 71 |
| Conread position: | 271-568 |
| Cow position: | chr20:15946979-15947277 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 34, 83 |
| Conread position: | 271-582 |
| Cow position: | chr20:3033463-3033146 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 208 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 271-625 |
| Cow position: | chr20:13763305-13762934 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 35, 80 |
| Conread position: | 271-664 |
| Cow position: | chr20:21914728-21914320 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 268 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 34, 87 |
| Conread position: | 271-664 |
| Cow position: | chr20:23799286-23798876 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 266 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 35, 29 |
| Conread position: | 271-672 |
| Cow position: | chr20:12438360-12438781 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 34, 80 |
| Conread position: | 271-672 |
| Cow position: | chr20:15292408-15291994 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 34, 64 |
| Conread position: | 271-672 |
| Cow position: | chr20:28565196-28565616 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 278 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 34, 83 |
| Conread position: | 271-672 |
| Cow position: | chr20:30684721-30684315 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 86, 29 |
| Conread position: | 297-664 |
| Cow position: | chr20:15097507-15097884 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 104, 29 |
| Conread position: | 297-664 |
| Cow position: | chr20:23469296-23469665 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 36, 56 |
| Conread position: | 306-576 |
| Cow position: | chr20:8993283-8993554 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 37, 18 |
| Conread position: | 306-672 |
| Cow position: | chr20:3271066-3270684 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 265 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 101, 35 |
| Conread position: | 308-598 |
| Cow position: | chr20:3251775-3252071 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 102, 43 |
| Conread position: | 308-626 |
| Cow position: | chr20:13679688-13680026 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 22, 244 |
| Conread position: | 310-494 |
| Cow position: | chr20:24518041-24517855 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 52, 89 |
| Conread position: | 312-580 |
| Cow position: | chr20:3684132-3684398 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 90, 29 |
| Conread position: | 328-650 |
| Cow position: | chr20:2790997-2791342 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 6 |
| Conread position: | 352-597 |
| Cow position: | chr20:19438259-19438013 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 58, 73 |
| Conread position: | 352-641 |
| Cow position: | chr20:823087-822783 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 353-670 |
| Cow position: | chr20:5484508-5484172 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 355-583 |
| Cow position: | chr20:25961419-25961187 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 163 |
| Conread position: | 356-561 |
| Cow position: | chr20:10845807-10846011 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 172 |
| Conread position: | 356-583 |
| Cow position: | chr20:5560400-5560631 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 46, 162 |
| Conread position: | 359-582 |
| Cow position: | chr20:27869509-27869282 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 359-659 |
| Cow position: | chr20:25850679-25850992 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 43, 141 |
| Conread position: | 359-670 |
| Cow position: | chr20:24614847-24614519 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 370-561 |
| Cow position: | chr20:15065066-15064872 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 32, 84 |
| Conread position: | 370-672 |
| Cow position: | chr20:7116168-7116489 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 32, 272 |
| Conread position: | 379-672 |
| Cow position: | chr20:13664924-13665221 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 135, 44 |
| Conread position: | 401-523 |
| Cow position: | chr20:18327676-18327793 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 408-672 |
| Cow position: | chr20:10840985-10841261 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 413-582 |
| Cow position: | chr20:19367332-19367504 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 47, 68 |
| Conread position: | 485-672 |
| Cow position: | chr20:24517213-24517014 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 97, 83 |
Show alignments to all cow chromosomes.