Cow genome map


           Conread name:
           Lym2-sn01_E07.f
        

               Conread position:
               3-522
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               378
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               28, 169
               

               Conread position:
               128-582
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 68
               

               Conread position:
               139-671
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 40
               

               Conread position:
               139-672
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 60
               

               Conread position:
               154-458
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               222
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               18, 45
               

               Conread position:
               178-496
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 16
               

               Conread position:
               270-528
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               35, 50
               

               Conread position:
               271-582
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               34, 80
               

               Conread position:
               271-609
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               34, 79
               

               Conread position:
               271-625
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               264
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               34, 58
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               263
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               271-672
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               279
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               40, 151
               

               Conread position:
               271-672
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               276
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               34, 80
               

               Conread position:
               273-664
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               32, 54
               

               Conread position:
               289-570
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               297-523
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               105, 44
               

               Conread position:
               298-585
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               302-660
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               250
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               38, 17
               

               Conread position:
               306-581
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               94, 35
               

               Conread position:
               306-672
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 21
               

               Conread position:
               308-660
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               94, 33
               

               Conread position:
               312-670
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               90, 36
               

               Conread position:
               314-502
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               38, 19
               

               Conread position:
               320-671
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               253
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               15, 101
               

               Conread position:
               321-589
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               10, 28
               

               Conread position:
               328-582
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               45, 145
               

               Conread position:
               339-627
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 7
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               5, 167
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-647
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               5, 299
               

               Conread position:
               352-664
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               223
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               5, 167
               

               Conread position:
               353-664
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               14, 290
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               46, 162
               

               Conread position:
               356-626
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               47, 249
               

               Conread position:
               356-626
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               45, 162
               

               Conread position:
               356-660
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               46, 85
               

               Conread position:
               356-672
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               92, 81
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               43, 277
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               43, 148
               

               Conread position:
               359-667
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               43, 106
               

               Conread position:
               360-583
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               42, 158
               

               Conread position:
               366-582
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               36, 152
               

               Conread position:
               366-671
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               31, 188
               

               Conread position:
               369-626
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               33, 152
               

               Conread position:
               369-672
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 71
               

               Conread position:
               372-672
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               30, 148
               

               Conread position:
               379-582
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 54
               

               Conread position:
               379-664
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               22, 262
               

               Conread position:
               386-672
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               14, 135
               

               Conread position:
               392-672
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 245
               

               Conread position:
               411-672
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               39, 63
               

               Conread position:
               416-671
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               95, 28
               

               Conread position:
               417-553
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               33, 89
               
Show alignments to all cow chromosomes.