Cow genome map


           Conread name:
           Lym2-sn01_E07.f
        

               Conread position:
               2-666
               

               Cow position:
               
               

               Alignm length:
               729
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 15
               

               Conread position:
               2-670
               

               Cow position:
               
               

               Alignm length:
               708
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 64
               

               Conread position:
               139-294
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               39, 25
               

               Conread position:
               139-639
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 25
               

               Conread position:
               140-285
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               147-273
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               82, 47
               

               Conread position:
               147-412
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               7, 45
               

               Conread position:
               215-582
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               100, 23
               

               Conread position:
               234-620
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 313
               

               Conread position:
               242-654
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 155
               

               Conread position:
               264-582
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               41, 18
               

               Conread position:
               270-672
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               280
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               70, 12
               

               Conread position:
               271-598
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               35, 49
               

               Conread position:
               271-609
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               271-660
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               266
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               262
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               265
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               34, 56
               

               Conread position:
               271-672
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               281
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               34, 80
               

               Conread position:
               271-672
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               34, 329
               

               Conread position:
               271-672
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               274
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               34, 80
               

               Conread position:
               271-672
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               275
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               34, 68
               

               Conread position:
               282-664
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               265
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               23, 38
               

               Conread position:
               282-672
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               23, 72
               

               Conread position:
               294-582
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               108, 57
               

               Conread position:
               297-582
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               105, 37
               

               Conread position:
               297-660
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               95, 44
               

               Conread position:
               303-582
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               28, 11
               

               Conread position:
               306-671
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               307-660
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               96, 21
               

               Conread position:
               307-672
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 367
               

               Conread position:
               308-557
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               93, 33
               

               Conread position:
               309-672
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 39
               

               Conread position:
               314-583
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               88, 12
               

               Conread position:
               319-581
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               49, 9
               

               Conread position:
               320-563
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               320-582
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               29, 40
               

               Conread position:
               320-582
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               47, 8
               

               Conread position:
               320-661
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               245
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               34, 107
               

               Conread position:
               321-560
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               322-581
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 31
               

               Conread position:
               328-672
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 165
               

               Conread position:
               339-670
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               235
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               63, 16
               

               Conread position:
               339-672
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               110, 18
               

               Conread position:
               352-579
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-582
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               5, 180
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 116
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-672
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               353-583
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               49, 165
               

               Conread position:
               353-670
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               356-550
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               46, 110
               

               Conread position:
               356-559
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               356-581
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               46, 105
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               359-583
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               43, 16
               

               Conread position:
               359-583
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               43, 64
               

               Conread position:
               359-583
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               43, 201
               

               Conread position:
               359-647
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 11
               

               Conread position:
               359-671
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               43, 285
               

               Conread position:
               359-672
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               43, 234
               

               Conread position:
               359-672
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               366-672
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               36, 72
               

               Conread position:
               370-582
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 43
               

               Conread position:
               377-656
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               20, 73
               

               Conread position:
               409-672
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               411-664
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               48, 105
               

               Conread position:
               445-672
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               11, 56
               

               Conread position:
               447-626
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               131, 16
               
Show alignments to all cow chromosomes.