Cow genome map
| Conread name: | Lym2-sn01_E07.f |
| Conread position: | 1-662 |
| Cow position: | chr23:26836910-26836228 (view UCSC Genome Browser custom track) |
| Alignm length: | 703 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 224 |
| Conread position: | 80-672 |
| Cow position: | chr23:13509586-13508994 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 128 |
| Conread position: | 138-365 |
| Cow position: | chr23:34175919-34175688 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 142, 34 |
| Conread position: | 147-647 |
| Cow position: | chr23:6217063-6216533 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 55 |
| Conread position: | 159-628 |
| Cow position: | chr23:19450705-19450233 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 19 |
| Conread position: | 159-671 |
| Cow position: | chr23:19331924-19332475 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 353 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 77, 19 |
| Conread position: | 247-547 |
| Cow position: | chr23:3863322-3863013 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 57 |
| Conread position: | 271-582 |
| Cow position: | chr23:5778739-5779056 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 32, 49 |
| Conread position: | 271-626 |
| Cow position: | chr23:14965405-14965769 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 34, 80 |
| Conread position: | 271-664 |
| Cow position: | chr23:967003-967405 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 34, 78 |
| Conread position: | 271-664 |
| Cow position: | chr23:36031029-36031433 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 266 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 131, 40 |
| Conread position: | 271-672 |
| Cow position: | chr23:27399846-27399430 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 272 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 30, 63 |
| Conread position: | 271-672 |
| Cow position: | chr23:30635954-30636375 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 279 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 34, 80 |
| Conread position: | 283-649 |
| Cow position: | chr23:25683730-25684104 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 250 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 63, 50 |
| Conread position: | 294-672 |
| Cow position: | chr23:16616528-16616923 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 39, 53 |
| Conread position: | 297-582 |
| Cow position: | chr23:2574850-2574567 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 104, 28 |
| Conread position: | 299-671 |
| Cow position: | chr23:38578596-38578216 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 90 |
| Conread position: | 303-563 |
| Cow position: | chr23:1327155-1327424 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 307-582 |
| Cow position: | chr23:16615684-16615965 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 17, 103 |
| Conread position: | 308-564 |
| Cow position: | chr23:2765147-2765404 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 94, 33 |
| Conread position: | 310-626 |
| Cow position: | chr23:4434763-4434437 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 6, 23 |
| Conread position: | 314-626 |
| Cow position: | chr23:20302515-20302192 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 43, 6 |
| Conread position: | 320-626 |
| Cow position: | chr23:15219590-15219915 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 44, 11 |
| Conread position: | 331-672 |
| Cow position: | chr23:4888962-4888607 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 23, 168 |
| Conread position: | 339-551 |
| Cow position: | chr23:29452040-29452258 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 339-664 |
| Cow position: | chr23:22146977-22147310 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 217 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 120, 18 |
| Conread position: | 352-583 |
| Cow position: | chr23:2312974-2313208 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 5, 139 |
| Conread position: | 352-583 |
| Cow position: | chr23:19950317-19950553 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 352-597 |
| Cow position: | chr23:28217556-28217300 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 353-672 |
| Cow position: | chr23:4277219-4276881 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 224 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 355-582 |
| Cow position: | chr23:31594975-31595205 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 48, 27 |
| Conread position: | 356-583 |
| Cow position: | chr23:31447076-31446845 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 46, 162 |
| Conread position: | 356-609 |
| Cow position: | chr23:4510338-4510083 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 46, 139 |
| Conread position: | 359-576 |
| Cow position: | chr23:4640366-4640587 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 359-583 |
| Cow position: | chr23:4360088-4359860 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 43, 154 |
| Conread position: | 359-597 |
| Cow position: | chr23:15525868-15525620 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 359-626 |
| Cow position: | chr23:3881447-3881723 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 43, 216 |
| Conread position: | 359-626 |
| Cow position: | chr23:19489800-19489519 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 359-672 |
| Cow position: | chr23:2026861-2027192 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 42, 283 |
| Conread position: | 359-672 |
| Cow position: | chr23:2757852-2757520 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 43, 283 |
| Conread position: | 366-660 |
| Cow position: | chr23:7273882-7273585 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 36, 166 |
| Conread position: | 378-667 |
| Cow position: | chr23:2763534-2763830 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 82, 47 |
| Conread position: | 379-627 |
| Cow position: | chr23:20155977-20156241 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 402-582 |
| Cow position: | chr23:2523983-2524166 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 426-672 |
| Cow position: | chr23:34175369-34175109 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 29, 90 |
Show alignments to all cow chromosomes.