Cow genome map
| Conread name: | Lym2-sn01_E07.f |
| Conread position: | 1-662 |
| Cow position: | chr24:14872650-14873325 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 68 |
| Conread position: | 81-672 |
| Cow position: | chr24:14301467-14300854 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 38 |
| Conread position: | 139-582 |
| Cow position: | chr24:6510261-6510715 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 25 |
| Conread position: | 139-671 |
| Cow position: | chr24:6538120-6537559 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 25 |
| Conread position: | 265-626 |
| Cow position: | chr24:29187722-29187346 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 40, 55 |
| Conread position: | 270-647 |
| Cow position: | chr24:12086633-12086243 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 35, 82 |
| Conread position: | 271-582 |
| Cow position: | chr24:12335343-12335657 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 34, 86 |
| Conread position: | 271-609 |
| Cow position: | chr24:17696545-17696889 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 229 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 34, 80 |
| Conread position: | 271-672 |
| Cow position: | chr24:4415097-4415513 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 267 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 89, 44 |
| Conread position: | 289-672 |
| Cow position: | chr24:6048640-6048281 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 31 |
| Conread position: | 290-571 |
| Cow position: | chr24:8152597-8152876 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 307-670 |
| Cow position: | chr24:12797369-12797751 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 42, 81 |
| Conread position: | 314-583 |
| Cow position: | chr24:6434628-6434357 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 43, 12 |
| Conread position: | 315-660 |
| Cow position: | chr24:14585460-14585117 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 74, 15 |
| Conread position: | 322-563 |
| Cow position: | chr24:1447939-1447692 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 339-582 |
| Cow position: | chr24:33933729-33933483 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 63, 18 |
| Conread position: | 352-582 |
| Cow position: | chr24:6024746-6024978 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 5, 115 |
| Conread position: | 352-639 |
| Cow position: | chr24:6084369-6084067 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 353-582 |
| Cow position: | chr24:35838270-35838499 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 49, 110 |
| Conread position: | 356-583 |
| Cow position: | chr24:8030498-8030267 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 46, 162 |
| Conread position: | 356-583 |
| Cow position: | chr24:33738993-33739221 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 46, 109 |
| Conread position: | 356-624 |
| Cow position: | chr24:9091938-9092208 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 45, 170 |
| Conread position: | 356-664 |
| Cow position: | chr24:40549221-40548904 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 46, 162 |
| Conread position: | 359-581 |
| Cow position: | chr24:12237397-12237172 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 23 |
| Conread position: | 359-583 |
| Cow position: | chr24:16084315-16084544 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 151 |
| Conread position: | 359-664 |
| Cow position: | chr24:19833729-19833407 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 43, 290 |
| Conread position: | 359-672 |
| Cow position: | chr24:148275-148605 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 282 |
| Conread position: | 360-583 |
| Cow position: | chr24:12484974-12485201 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 42, 158 |
| Conread position: | 366-598 |
| Cow position: | chr24:16648980-16649223 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 366-625 |
| Cow position: | chr24:6145705-6145438 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 44, 147 |
| Conread position: | 409-583 |
| Cow position: | chr24:44017839-44017662 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 108 |
| Conread position: | 411-664 |
| Cow position: | chr24:22952427-22952162 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 48, 230 |
Show alignments to all cow chromosomes.