Cow genome map
| Conread name: | Lym2-sn01_E07.f |
| Conread position: | 1-645 |
| Cow position: | chr25:3378057-3378751 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 21 |
| Conread position: | 79-582 |
| Cow position: | chr25:20494926-20494431 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 88 |
| Conread position: | 122-672 |
| Cow position: | chr25:23344778-23345371 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 374 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 25, 69 |
| Conread position: | 270-498 |
| Cow position: | chr25:18235507-18235275 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 30, 103 |
| Conread position: | 271-664 |
| Cow position: | chr25:18889626-18890032 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 34, 80 |
| Conread position: | 271-667 |
| Cow position: | chr25:12942311-12942721 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 34, 80 |
| Conread position: | 271-672 |
| Cow position: | chr25:13781419-13780998 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 297-664 |
| Cow position: | chr25:8675273-8674898 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 36, 50 |
| Conread position: | 306-672 |
| Cow position: | chr25:17468349-17468727 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 61 |
| Conread position: | 308-582 |
| Cow position: | chr25:34346670-34346944 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 92, 25 |
| Conread position: | 309-662 |
| Cow position: | chr25:14016512-14016146 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 93, 32 |
| Conread position: | 320-648 |
| Cow position: | chr25:12759257-12759600 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 48, 101 |
| Conread position: | 320-672 |
| Cow position: | chr25:18093353-18092987 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 29, 39 |
| Conread position: | 352-583 |
| Cow position: | chr25:18194790-18195026 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 5, 158 |
| Conread position: | 352-583 |
| Cow position: | chr25:19917392-19917156 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 352-583 |
| Cow position: | chr25:32580273-32580038 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 5, 116 |
| Conread position: | 352-672 |
| Cow position: | chr25:17589246-17589580 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 5, 163 |
| Conread position: | 352-672 |
| Cow position: | chr25:26922524-26922197 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 5, 115 |
| Conread position: | 356-569 |
| Cow position: | chr25:34656143-34656359 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 46, 195 |
| Conread position: | 356-583 |
| Cow position: | chr25:27022263-27022494 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 356-597 |
| Cow position: | chr25:35362126-35362371 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 46, 162 |
| Conread position: | 356-611 |
| Cow position: | chr25:9544364-9544103 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 46, 123 |
| Conread position: | 359-589 |
| Cow position: | chr25:34014188-34014420 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 45, 118 |
| Conread position: | 359-664 |
| Cow position: | chr25:22147795-22147477 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 44, 283 |
| Conread position: | 359-664 |
| Cow position: | chr25:26279559-26279248 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 43, 218 |
| Conread position: | 366-568 |
| Cow position: | chr25:11375055-11375261 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 366-662 |
| Cow position: | chr25:18275535-18275848 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 24, 281 |
| Conread position: | 370-582 |
| Cow position: | chr25:33665584-33665799 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 31, 86 |
| Conread position: | 379-672 |
| Cow position: | chr25:18421950-18421637 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 171 |
| Conread position: | 385-672 |
| Cow position: | chr25:25506923-25506619 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 210 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 17, 102 |
| Conread position: | 409-670 |
| Cow position: | chr25:18027376-18027655 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
Show alignments to all cow chromosomes.