Cow genome map


           Conread name:
           Lym2-sn01_E07.f
        

               Conread position:
               1-300
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               47, 179
               

               Conread position:
               1-349
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               47, 71
               

               Conread position:
               1-352
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               51, 216
               

               Conread position:
               1-393
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               41, 120
               

               Conread position:
               1-666
               

               Cow position:
               
               

               Alignm length:
               716
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 49
               

               Conread position:
               104-474
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               280
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               38, 18
               

               Conread position:
               141-662
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               373
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               146-672
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 13
               

               Conread position:
               231-582
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               15, 28
               

               Conread position:
               265-663
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 140
               

               Conread position:
               271-589
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               34, 83
               

               Conread position:
               271-609
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               34, 62
               

               Conread position:
               271-663
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               260
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               271-672
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               29, 49
               

               Conread position:
               271-672
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               280
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               42, 84
               

               Conread position:
               271-672
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               32, 89
               

               Conread position:
               272-672
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               276
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               82, 28
               

               Conread position:
               288-660
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               246
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               289-582
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               68, 25
               

               Conread position:
               297-552
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               105, 18
               

               Conread position:
               297-660
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               247
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               105, 44
               

               Conread position:
               297-664
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               36, 52
               

               Conread position:
               301-553
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               100, 40
               

               Conread position:
               307-563
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               42, 215
               

               Conread position:
               307-660
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               95, 21
               

               Conread position:
               308-672
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               247
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               94, 20
               

               Conread position:
               310-670
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               36, 153
               

               Conread position:
               314-582
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               41, 12
               

               Conread position:
               314-597
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 12
               

               Conread position:
               318-583
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 43
               

               Conread position:
               318-671
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               265
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               15, 42
               

               Conread position:
               320-609
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               320-671
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               22, 13
               

               Conread position:
               320-672
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               18, 11
               

               Conread position:
               320-672
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               6, 202
               

               Conread position:
               320-672
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               258
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               29, 40
               

               Conread position:
               321-672
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               331-664
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               239
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               24, 315
               

               Conread position:
               331-672
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 312
               

               Conread position:
               339-672
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               63, 18
               

               Conread position:
               341-662
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               29, 88
               

               Conread position:
               352-579
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               5, 167
               

               Conread position:
               352-579
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               51, 166
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               5, 117
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               5, 117
               

               Conread position:
               352-586
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-597
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-627
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               46, 162
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 161
               

               Conread position:
               356-626
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               46, 162
               

               Conread position:
               356-671
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               46, 132
               

               Conread position:
               359-576
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               42, 83
               

               Conread position:
               359-583
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               359-583
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               359-626
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               218
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               43, 71
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               43, 233
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               43, 187
               

               Conread position:
               359-672
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               359-672
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               43, 283
               

               Conread position:
               359-672
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               43, 162
               

               Conread position:
               359-672
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               90, 31
               

               Conread position:
               365-583
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               96, 152
               

               Conread position:
               365-583
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               31, 150
               

               Conread position:
               370-582
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               32, 105
               

               Conread position:
               372-664
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               30, 270
               

               Conread position:
               372-672
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               227
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               30, 220
               

               Conread position:
               379-582
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               385-582
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 116
               

               Conread position:
               387-507
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               10, 77
               

               Conread position:
               388-672
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               62, 27
               

               Conread position:
               389-647
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               11, 244
               

               Conread position:
               401-672
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               49, 168
               

               Conread position:
               409-580
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               409-582
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               41, 163
               

               Conread position:
               411-664
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               34, 43
               

               Conread position:
               411-668
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               48, 180
               

               Conread position:
               426-597
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               34, 0
               
Show alignments to all cow chromosomes.