Cow genome map

Conread name: Lym2-sn01_E07.f

Conread position: 1-495
Cow position: chr7:26851985-26851477 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 31

Conread position: 14-672
Cow position: chr7:59028662-59027988 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 81

Conread position: 80-467
Cow position: chr7:30302827-30302434 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 285
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 28, 130

Conread position: 80-498
Cow position: chr7:67812772-67812340 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 10

Conread position: 110-661
Cow position: chr7:63951266-63951832 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 30

Conread position: 111-667
Cow position: chr7:27584534-27585108 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 28

Conread position: 139-421
Cow position: chr7:57564819-57565107 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 25

Conread position: 139-525
Cow position: chr7:54514590-54514979 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 253
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 163, 13

Conread position: 139-532
Cow position: chr7:40269970-40270397 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 304
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 17, 52

Conread position: 139-570
Cow position: chr7:49291221-49290762 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 305
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 84, 38

Conread position: 139-657
Cow position: chr7:68479004-68478454 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 24

Conread position: 139-672
Cow position: chr7:68085320-68084773 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 226, 24

Conread position: 141-672
Cow position: chr7:58993730-58993184 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 374
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 31, 11

Conread position: 144-493
Cow position: chr7:68432281-68431912 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 252
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 28, 20

Conread position: 170-670
Cow position: chr7:30119064-30119550 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 24

Conread position: 179-672
Cow position: chr7:65339209-65339715 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 333
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 58, 30

Conread position: 203-563
Cow position: chr7:52804223-52804602 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 266
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 12

Conread position: 211-660
Cow position: chr7:6488845-6489313 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 303
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 147

Conread position: 215-671
Cow position: chr7:7296422-7296891 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 76

Conread position: 231-664
Cow position: chr7:24808022-24808468 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 291
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 15, 28

Conread position: 239-523
Cow position: chr7:1404722-1405033 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 270-582
Cow position: chr7:5662775-5662464 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 35, 12

Conread position: 271-563
Cow position: chr7:67799256-67798960 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 194
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 34, 49

Conread position: 271-582
Cow position: chr7:5183811-5183495 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 203
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 97

Conread position: 271-664
Cow position: chr7:446225-446632 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 280
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 34, 49

Conread position: 271-664
Cow position: chr7:10431013-10431419 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 268
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 34, 79

Conread position: 271-664
Cow position: chr7:13537178-13537584 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 265
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 34, 80

Conread position: 271-664
Cow position: chr7:21234606-21235012 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 272
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 28, 60

Conread position: 271-672
Cow position: chr7:14139195-14139611 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 265
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 49

Conread position: 271-672
Cow position: chr7:21127257-21127672 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 269
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 34, 80

Conread position: 271-672
Cow position: chr7:46901675-46902091 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 279
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 34, 80

Conread position: 296-583
Cow position: chr7:23815595-23815881 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 8, 30

Conread position: 296-672
Cow position: chr7:21985775-21985384 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 263
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 106, 37

Conread position: 297-582
Cow position: chr7:994604-994325 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 189
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 98, 34

Conread position: 297-582
Cow position: chr7:35296894-35297181 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 101, 44

Conread position: 297-609
Cow position: chr7:1372277-1372595 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 105, 29

Conread position: 305-648
Cow position: chr7:751285-750932 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 235
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 28

Conread position: 307-563
Cow position: chr7:24934595-24934855 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 32, 7

Conread position: 307-598
Cow position: chr7:1610847-1611143 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 207
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 95, 30

Conread position: 307-626
Cow position: chr7:63385704-63385375 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 219
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 95, 26

Conread position: 307-672
Cow position: chr7:23836479-23836107 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 272
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 6, 20

Conread position: 309-666
Cow position: chr7:25102396-25102025 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 189

Conread position: 312-555
Cow position: chr7:41487922-41487671 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 18

Conread position: 314-583
Cow position: chr7:61559576-61559302 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 205

Conread position: 314-672
Cow position: chr7:19048533-19048903 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 14

Conread position: 318-647
Cow position: chr7:63021203-63020870 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 229
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 13, 32

Conread position: 318-672
Cow position: chr7:21310569-21310194 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 249
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 17, 232

Conread position: 320-582
Cow position: chr7:29470480-29470213 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 179
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 29, 177

Conread position: 320-582
Cow position: chr7:47051043-47050778 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 216

Conread position: 320-582
Cow position: chr7:63550342-63550600 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 47, 147

Conread position: 320-582
Cow position: chr7:68777800-68778064 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 20

Conread position: 320-667
Cow position: chr7:27540005-27540367 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 241
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 24, 203

Conread position: 320-672
Cow position: chr7:39555737-39556110 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 249
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 29, 201

Conread position: 320-672
Cow position: chr7:58377858-58378207 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 244
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 80, 28

Conread position: 321-582
Cow position: chr7:51014301-51014045 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 18

Conread position: 321-672
Cow position: chr7:35287199-35287575 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 253
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 121

Conread position: 322-657
Cow position: chr7:1400006-1400358 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 46, 24

Conread position: 331-664
Cow position: chr7:55537572-55537918 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 232
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 10, 97

Conread position: 335-582
Cow position: chr7:41490448-41490201 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 178
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 67, 13

Conread position: 339-576
Cow position: chr7:68479503-68479263 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 165
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 63, 18

Conread position: 352-582
Cow position: chr7:3155090-3154855 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 352-582
Cow position: chr7:3234358-3234593 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 352-583
Cow position: chr7:3300831-3301065 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 5, 115

Conread position: 352-583
Cow position: chr7:6648331-6648566 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 5, 31

Conread position: 352-583
Cow position: chr7:20515447-20515683 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 5, 167

Conread position: 352-583
Cow position: chr7:20528350-20528586 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 5, 167

Conread position: 352-583
Cow position: chr7:20799121-20799353 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 5, 89

Conread position: 352-640
Cow position: chr7:11446881-11446577 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 205
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 5, 117

Conread position: 356-582
Cow position: chr7:67417362-67417133 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 103, 74

Conread position: 356-582
Cow position: chr7:68232260-68232030 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 46, 0

Conread position: 356-583
Cow position: chr7:16552-16783 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 46, 162

Conread position: 356-583
Cow position: chr7:21320476-21320245 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 46, 162

Conread position: 356-583
Cow position: chr7:43830705-43830936 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 46, 162

Conread position: 356-670
Cow position: chr7:21975427-21975750 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 222
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 103

Conread position: 359-563
Cow position: chr7:34149415-34149207 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 359-563
Cow position: chr7:34486231-34486022 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 359-575
Cow position: chr7:52119768-52119988 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 147
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 359-664
Cow position: chr7:8144927-8145245 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 43, 283

Conread position: 359-664
Cow position: chr7:39792072-39791754 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 222
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 43, 283

Conread position: 359-664
Cow position: chr7:45948835-45949151 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 71

Conread position: 359-672
Cow position: chr7:19924510-19924829 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 212
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 87, 41

Conread position: 359-672
Cow position: chr7:64241631-64241957 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 220
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 43, 283

Conread position: 360-583
Cow position: chr7:60463465-60463238 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 42, 158

Conread position: 366-598
Cow position: chr7:68908137-68907898 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 146

Conread position: 370-598
Cow position: chr7:68857807-68858047 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 207

Conread position: 376-664
Cow position: chr7:54603150-54602850 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 206
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 9

Conread position: 379-672
Cow position: chr7:1357389-1357696 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 212
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 139

Conread position: 385-582
Cow position: chr7:62679382-62679580 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 31

Conread position: 385-672
Cow position: chr7:27786912-27786609 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 203
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 77

Conread position: 402-672
Cow position: chr7:51084875-51084599 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 201
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 48, 105

Conread position: 406-626
Cow position: chr7:26891076-26890846 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 112

Conread position: 409-582
Cow position: chr7:25439771-25439596 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 51, 23

Conread position: 409-582
Cow position: chr7:41869679-41869856 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 415-672
Cow position: chr7:27101854-27102129 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 185
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 30, 52

Conread position: 442-573
Cow position: chr7:68895311-68895177 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 455-672
Cow position: chr7:26851448-26851228 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 129, 7

Conread position: 459-654
Cow position: chr7:30302259-30302053 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 122, 0

Conread position: 468-672
Cow position: chr7:65496611-65496812 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 136, 54

Conread position: 486-672
Cow position: chr7:67812303-67812107 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 98, 29

Show alignments to all cow chromosomes.