Cow genome map


           Conread name:
           Lym2-sn01_E07.f
        

               Conread position:
               1-495
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 31
               

               Conread position:
               14-672
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 81
               

               Conread position:
               80-467
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               285
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               28, 130
               

               Conread position:
               80-498
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 10
               

               Conread position:
               110-661
               

               Cow position:
               
               

               Alignm length:
               592
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 30
               

               Conread position:
               111-667
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 28
               

               Conread position:
               139-421
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 25
               

               Conread position:
               139-525
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               163, 13
               

               Conread position:
               139-532
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               304
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               17, 52
               

               Conread position:
               139-570
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               305
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               84, 38
               

               Conread position:
               139-657
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 24
               

               Conread position:
               139-672
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 24
               

               Conread position:
               141-672
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               374
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               31, 11
               

               Conread position:
               144-493
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               170-670
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 24
               

               Conread position:
               179-672
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               333
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               58, 30
               

               Conread position:
               203-563
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               23, 12
               

               Conread position:
               211-660
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               303
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               10, 147
               

               Conread position:
               215-671
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 76
               

               Conread position:
               231-664
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               291
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               15, 28
               

               Conread position:
               239-523
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               270-582
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               35, 12
               

               Conread position:
               271-563
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               271-582
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               35, 97
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               268
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               34, 79
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               265
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               34, 80
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               272
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               28, 60
               

               Conread position:
               271-672
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               271-672
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               269
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               34, 80
               

               Conread position:
               271-672
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               279
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               34, 80
               

               Conread position:
               296-583
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               8, 30
               

               Conread position:
               296-672
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               106, 37
               

               Conread position:
               297-582
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               98, 34
               

               Conread position:
               297-582
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               101, 44
               

               Conread position:
               297-609
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               105, 29
               

               Conread position:
               305-648
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               61, 28
               

               Conread position:
               307-563
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               32, 7
               

               Conread position:
               307-598
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               95, 30
               

               Conread position:
               307-626
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               95, 26
               

               Conread position:
               307-672
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               6, 20
               

               Conread position:
               309-666
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 189
               

               Conread position:
               312-555
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 18
               

               Conread position:
               314-583
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               43, 205
               

               Conread position:
               314-672
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 14
               

               Conread position:
               318-647
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               13, 32
               

               Conread position:
               318-672
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               249
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               17, 232
               

               Conread position:
               320-582
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               29, 177
               

               Conread position:
               320-582
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               29, 216
               

               Conread position:
               320-582
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               47, 147
               

               Conread position:
               320-582
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               47, 20
               

               Conread position:
               320-667
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               24, 203
               

               Conread position:
               320-672
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               249
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               29, 201
               

               Conread position:
               320-672
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               244
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               80, 28
               

               Conread position:
               321-582
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               46, 18
               

               Conread position:
               321-672
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               13, 121
               

               Conread position:
               322-657
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               247
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               46, 24
               

               Conread position:
               331-664
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               10, 97
               

               Conread position:
               335-582
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               67, 13
               

               Conread position:
               339-576
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               63, 18
               

               Conread position:
               352-582
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               352-582
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               5, 115
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               5, 31
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               5, 167
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               5, 167
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               5, 89
               

               Conread position:
               352-640
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               5, 117
               

               Conread position:
               356-582
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               103, 74
               

               Conread position:
               356-582
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               46, 162
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               46, 162
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               46, 162
               

               Conread position:
               356-670
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               46, 103
               

               Conread position:
               359-563
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               359-563
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               359-575
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               43, 283
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               222
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               43, 283
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               43, 71
               

               Conread position:
               359-672
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               87, 41
               

               Conread position:
               359-672
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               43, 283
               

               Conread position:
               360-583
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               42, 158
               

               Conread position:
               366-598
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               35, 146
               

               Conread position:
               370-598
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               37, 207
               

               Conread position:
               376-664
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               379-672
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               23, 139
               

               Conread position:
               385-582
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               15, 31
               

               Conread position:
               385-672
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 77
               

               Conread position:
               402-672
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               48, 105
               

               Conread position:
               406-626
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 112
               

               Conread position:
               409-582
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               51, 23
               

               Conread position:
               409-582
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               415-672
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               30, 52
               

               Conread position:
               442-573
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               455-672
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               129, 7
               

               Conread position:
               459-654
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               468-672
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               136, 54
               

               Conread position:
               486-672
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               98, 29
               
Show alignments to all cow chromosomes.