Cow genome map
| Conread name: | Lym2-sn01_E07.f |
| Conread position: | 1-535 |
| Cow position: | chr8:19188729-19188162 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 219 |
| Conread position: | 3-267 |
| Cow position: | chr8:38577884-38578169 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 57, 215 |
| Conread position: | 141-580 |
| Cow position: | chr8:42468071-42467604 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 23 |
| Conread position: | 142-672 |
| Cow position: | chr8:9135177-9135718 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 10 |
| Conread position: | 149-670 |
| Cow position: | chr8:51328274-51327745 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 46 |
| Conread position: | 231-582 |
| Cow position: | chr8:27925940-27925594 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 231-672 |
| Cow position: | chr8:13809221-13808774 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 312 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 165, 61 |
| Conread position: | 271-609 |
| Cow position: | chr8:2170786-2171135 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 271-609 |
| Cow position: | chr8:19330328-19329980 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 271-626 |
| Cow position: | chr8:25776080-25776450 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 34, 80 |
| Conread position: | 271-626 |
| Cow position: | chr8:32318956-32319326 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 243 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 34, 80 |
| Conread position: | 271-626 |
| Cow position: | chr8:44243981-44244351 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 271-641 |
| Cow position: | chr8:25522992-25522610 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 251 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 34, 80 |
| Conread position: | 271-663 |
| Cow position: | chr8:4686988-4686580 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 34, 75 |
| Conread position: | 271-664 |
| Cow position: | chr8:3856422-3856828 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 265 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 69, 78 |
| Conread position: | 271-664 |
| Cow position: | chr8:5016774-5016367 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 273 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 271-664 |
| Cow position: | chr8:23771227-23770821 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 264 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 80, 25 |
| Conread position: | 271-664 |
| Cow position: | chr8:36635952-36636355 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 261 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 69, 48 |
| Conread position: | 271-664 |
| Cow position: | chr8:38390959-38390554 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 57, 78 |
| Conread position: | 271-664 |
| Cow position: | chr8:50994378-50993974 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 265 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 271-671 |
| Cow position: | chr8:10743038-10743457 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 83, 29 |
| Conread position: | 271-672 |
| Cow position: | chr8:19051069-19050656 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 271-672 |
| Cow position: | chr8:24915749-24916165 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 271-672 |
| Cow position: | chr8:47661732-47662154 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 281 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 34, 73 |
| Conread position: | 293-582 |
| Cow position: | chr8:45316555-45316848 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 11, 57 |
| Conread position: | 296-582 |
| Cow position: | chr8:33430497-33430198 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 297-582 |
| Cow position: | chr8:32931073-32930788 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 105, 44 |
| Conread position: | 306-664 |
| Cow position: | chr8:3785263-3784896 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 253 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 27, 47 |
| Conread position: | 307-598 |
| Cow position: | chr8:44693841-44693545 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 60, 11 |
| Conread position: | 313-647 |
| Cow position: | chr8:45160818-45161162 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 225 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 21, 165 |
| Conread position: | 315-672 |
| Cow position: | chr8:15687608-15687977 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 31 |
| Conread position: | 318-670 |
| Cow position: | chr8:38606977-38607344 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 14, 44 |
| Conread position: | 321-657 |
| Cow position: | chr8:47491290-47491638 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 38 |
| Conread position: | 331-563 |
| Cow position: | chr8:51667760-51668001 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 24, 175 |
| Conread position: | 339-626 |
| Cow position: | chr8:8229258-8229558 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 63, 18 |
| Conread position: | 352-582 |
| Cow position: | chr8:45189595-45189365 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 50, 203 |
| Conread position: | 352-583 |
| Cow position: | chr8:1153795-1154031 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 5, 117 |
| Conread position: | 352-583 |
| Cow position: | chr8:6065256-6065492 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 352-583 |
| Cow position: | chr8:8518071-8518305 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 5, 136 |
| Conread position: | 352-583 |
| Cow position: | chr8:9735759-9735523 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 352-583 |
| Cow position: | chr8:26005084-26005321 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 5, 139 |
| Conread position: | 352-598 |
| Cow position: | chr8:27578914-27578663 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 352-626 |
| Cow position: | chr8:1319557-1319267 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 352-626 |
| Cow position: | chr8:22571783-22572071 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 352-639 |
| Cow position: | chr8:11761790-11761498 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 50, 141 |
| Conread position: | 355-647 |
| Cow position: | chr8:25543009-25542706 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 54 |
| Conread position: | 356-563 |
| Cow position: | chr8:34348185-34347975 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 127 |
| Conread position: | 356-580 |
| Cow position: | chr8:14591395-14591620 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 46, 203 |
| Conread position: | 356-580 |
| Cow position: | chr8:23217267-23217039 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 46, 85 |
| Conread position: | 356-583 |
| Cow position: | chr8:8556641-8556872 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 46, 162 |
| Conread position: | 356-583 |
| Cow position: | chr8:9275518-9275288 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 46, 162 |
| Conread position: | 356-583 |
| Cow position: | chr8:32631520-32631749 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 46, 143 |
| Conread position: | 359-583 |
| Cow position: | chr8:10748879-10748651 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 359-583 |
| Cow position: | chr8:47069301-47069530 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 359-624 |
| Cow position: | chr8:12449452-12449176 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 359-626 |
| Cow position: | chr8:14928489-14928770 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 43, 233 |
| Conread position: | 359-639 |
| Cow position: | chr8:2886255-2885965 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 359-656 |
| Cow position: | chr8:59262389-59262698 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 43, 283 |
| Conread position: | 359-664 |
| Cow position: | chr8:33588878-33588565 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 217 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 43, 185 |
| Conread position: | 359-664 |
| Cow position: | chr8:39195713-39196029 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 43, 83 |
| Conread position: | 359-664 |
| Cow position: | chr8:49214931-49214613 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 43, 283 |
| Conread position: | 359-664 |
| Cow position: | chr8:50288647-50288964 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 43, 278 |
| Conread position: | 365-671 |
| Cow position: | chr8:21158320-21158643 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 37, 195 |
| Conread position: | 366-621 |
| Cow position: | chr8:61034869-61035136 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 367-672 |
| Cow position: | chr8:23765911-23766226 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 137, 17 |
| Conread position: | 376-672 |
| Cow position: | chr8:60060866-60060554 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 25, 40 |
| Conread position: | 379-582 |
| Cow position: | chr8:42759428-42759221 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 385-582 |
| Cow position: | chr8:27983319-27983518 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 17, 45 |
| Conread position: | 387-609 |
| Cow position: | chr8:8910697-8910466 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 401-672 |
| Cow position: | chr8:24876260-24876533 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 23 |
| Conread position: | 402-648 |
| Cow position: | chr8:38578475-38578732 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 198 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 52, 237 |
| Conread position: | 406-661 |
| Cow position: | chr8:16084523-16084278 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 172, 26 |
| Conread position: | 409-582 |
| Cow position: | chr8:9540043-9540216 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 41, 10 |
| Conread position: | 426-667 |
| Cow position: | chr8:25407881-25407628 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 33, 215 |
| Conread position: | 441-672 |
| Cow position: | chr8:13736062-13735820 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 132, 21 |
Show alignments to all cow chromosomes.