Cow genome map

Conread name: Lym2-sn01_E07.f

Conread position: 1-535
Cow position:
Alignm length: 575
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 219

Conread position: 3-267
Cow position:
Alignm length: 288
Alignm identity: 197
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 57, 215

Conread position: 141-580
Cow position:
Alignm length: 472
Alignm identity: 301
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 23

Conread position: 142-672
Cow position:
Alignm length: 557
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 10

Conread position: 149-670
Cow position:
Alignm length: 546
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 46

Conread position: 231-582
Cow position:
Alignm length: 358
Alignm identity: 230
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 28

Conread position: 231-672
Cow position:
Alignm length: 462
Alignm identity: 312
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 165, 61

Conread position: 271-609
Cow position:
Alignm length: 355
Alignm identity: 230
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 17, 36

Conread position: 271-609
Cow position:
Alignm length: 350
Alignm identity: 222
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 49

Conread position: 271-626
Cow position:
Alignm length: 373
Alignm identity: 242
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 80

Conread position: 271-626
Cow position:
Alignm length: 373
Alignm identity: 243
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 34, 80

Conread position: 271-626
Cow position:
Alignm length: 375
Alignm identity: 247
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 49

Conread position: 271-641
Cow position:
Alignm length: 388
Alignm identity: 251
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 34, 80

Conread position: 271-663
Cow position:
Alignm length: 411
Alignm identity: 264
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 75

Conread position: 271-664
Cow position:
Alignm length: 411
Alignm identity: 265
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 69, 78

Conread position: 271-664
Cow position:
Alignm length: 412
Alignm identity: 273
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 34, 49

Conread position: 271-664
Cow position:
Alignm length: 412
Alignm identity: 264
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 80, 25

Conread position: 271-664
Cow position:
Alignm length: 410
Alignm identity: 261
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 69, 48

Conread position: 271-664
Cow position:
Alignm length: 410
Alignm identity: 265
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 57, 78

Conread position: 271-664
Cow position:
Alignm length: 412
Alignm identity: 265
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 34, 49

Conread position: 271-671
Cow position:
Alignm length: 424
Alignm identity: 275
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 83, 29

Conread position: 271-672
Cow position:
Alignm length: 416
Alignm identity: 258
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 34, 49

Conread position: 271-672
Cow position:
Alignm length: 423
Alignm identity: 280
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 34, 49

Conread position: 271-672
Cow position:
Alignm length: 426
Alignm identity: 281
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 34, 73

Conread position: 293-582
Cow position:
Alignm length: 296
Alignm identity: 194
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 11, 57

Conread position: 296-582
Cow position:
Alignm length: 300
Alignm identity: 198
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 297-582
Cow position:
Alignm length: 290
Alignm identity: 191
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 105, 44

Conread position: 306-664
Cow position:
Alignm length: 375
Alignm identity: 253
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 27, 47

Conread position: 307-598
Cow position:
Alignm length: 305
Alignm identity: 207
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 11

Conread position: 313-647
Cow position:
Alignm length: 347
Alignm identity: 225
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 21, 165

Conread position: 315-672
Cow position:
Alignm length: 377
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 31

Conread position: 318-670
Cow position:
Alignm length: 373
Alignm identity: 246
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 14, 44

Conread position: 321-657
Cow position:
Alignm length: 354
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 38

Conread position: 331-563
Cow position:
Alignm length: 243
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 175

Conread position: 339-626
Cow position:
Alignm length: 302
Alignm identity: 198
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 18

Conread position: 352-582
Cow position:
Alignm length: 235
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 50, 203

Conread position: 352-583
Cow position:
Alignm length: 238
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 5, 117

Conread position: 352-583
Cow position:
Alignm length: 237
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 352-583
Cow position:
Alignm length: 237
Alignm identity: 161
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 5, 136

Conread position: 352-583
Cow position:
Alignm length: 237
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 352-583
Cow position:
Alignm length: 239
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 139

Conread position: 352-598
Cow position:
Alignm length: 252
Alignm identity: 176
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 5, 0

Conread position: 352-626
Cow position:
Alignm length: 291
Alignm identity: 204
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 5, 0

Conread position: 352-626
Cow position:
Alignm length: 289
Alignm identity: 195
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 5, 0

Conread position: 352-639
Cow position:
Alignm length: 299
Alignm identity: 208
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 50, 141

Conread position: 355-647
Cow position:
Alignm length: 308
Alignm identity: 203
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 54

Conread position: 356-563
Cow position:
Alignm length: 213
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 127

Conread position: 356-580
Cow position:
Alignm length: 229
Alignm identity: 156
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 203

Conread position: 356-580
Cow position:
Alignm length: 231
Alignm identity: 165
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 85

Conread position: 356-583
Cow position:
Alignm length: 233
Alignm identity: 157
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 46, 162

Conread position: 356-583
Cow position:
Alignm length: 233
Alignm identity: 160
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 46, 162

Conread position: 356-583
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 143

Conread position: 359-583
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 359-583
Cow position:
Alignm length: 230
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 359-624
Cow position:
Alignm length: 277
Alignm identity: 182
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 359-626
Cow position:
Alignm length: 283
Alignm identity: 194
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 233

Conread position: 359-639
Cow position:
Alignm length: 291
Alignm identity: 193
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 43, 0

Conread position: 359-656
Cow position:
Alignm length: 312
Alignm identity: 212
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 43, 283

Conread position: 359-664
Cow position:
Alignm length: 322
Alignm identity: 217
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 43, 185

Conread position: 359-664
Cow position:
Alignm length: 320
Alignm identity: 216
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 83

Conread position: 359-664
Cow position:
Alignm length: 321
Alignm identity: 215
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 43, 283

Conread position: 359-664
Cow position:
Alignm length: 320
Alignm identity: 221
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 43, 278

Conread position: 365-671
Cow position:
Alignm length: 326
Alignm identity: 219
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 37, 195

Conread position: 366-621
Cow position:
Alignm length: 268
Alignm identity: 175
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 367-672
Cow position:
Alignm length: 324
Alignm identity: 225
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 137, 17

Conread position: 376-672
Cow position:
Alignm length: 317
Alignm identity: 216
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 25, 40

Conread position: 379-582
Cow position:
Alignm length: 208
Alignm identity: 146
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 385-582
Cow position:
Alignm length: 202
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 17, 45

Conread position: 387-609
Cow position:
Alignm length: 232
Alignm identity: 159
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 401-672
Cow position:
Alignm length: 281
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 23

Conread position: 402-648
Cow position:
Alignm length: 260
Alignm identity: 198
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 52, 237

Conread position: 406-661
Cow position:
Alignm length: 264
Alignm identity: 191
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 172, 26

Conread position: 409-582
Cow position:
Alignm length: 177
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 10

Conread position: 426-667
Cow position:
Alignm length: 256
Alignm identity: 177
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 33, 215

Conread position: 441-672
Cow position:
Alignm length: 244
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 132, 21

Show alignments to all cow chromosomes.