Cow genome map


           Conread name:
           Lym2-sn01_E07.f
        

               Conread position:
               1-662
               

               Cow position:
               
               

               Alignm length:
               726
               

               Alignm identity:
               543
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 224
               

               Conread position:
               3-628
               

               Cow position:
               
               

               Alignm length:
               665
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 217
               

               Conread position:
               3-658
               

               Cow position:
               
               

               Alignm length:
               696
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 197
               

               Conread position:
               3-671
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 41
               

               Conread position:
               3-672
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               474
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               36, 66
               

               Conread position:
               80-672
               

               Cow position:
               
               

               Alignm length:
               636
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 129
               

               Conread position:
               139-582
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 59
               

               Conread position:
               240-598
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               245
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               39, 18
               

               Conread position:
               270-672
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               35, 12
               

               Conread position:
               271-626
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               69, 48
               

               Conread position:
               271-647
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               261
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               34, 11
               

               Conread position:
               271-648
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               53, 35
               

               Conread position:
               271-664
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               34, 50
               

               Conread position:
               271-670
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               280
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               271-672
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               270
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               271-672
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               34, 71
               

               Conread position:
               282-664
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               260
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               23, 38
               

               Conread position:
               290-660
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               254
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               5, 37
               

               Conread position:
               296-672
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               262
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               106, 32
               

               Conread position:
               297-672
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               262
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               105, 36
               

               Conread position:
               302-583
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               304-670
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               98, 15
               

               Conread position:
               305-555
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               65, 53
               

               Conread position:
               306-672
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               262
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               306-672
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               96, 22
               

               Conread position:
               306-672
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               11, 82
               

               Conread position:
               306-672
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 18
               

               Conread position:
               307-538
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               94, 24
               

               Conread position:
               307-556
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               308-672
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               266
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               15, 141
               

               Conread position:
               309-667
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               279
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               49, 122
               

               Conread position:
               310-582
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               92, 47
               

               Conread position:
               312-569
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               91, 39
               

               Conread position:
               318-582
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               13, 99
               

               Conread position:
               321-657
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               81, 46
               

               Conread position:
               323-611
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               74, 194
               

               Conread position:
               331-664
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               36, 307
               

               Conread position:
               336-672
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               68, 32
               

               Conread position:
               337-664
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               70, 11
               

               Conread position:
               339-639
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               63, 303
               

               Conread position:
               346-583
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               11, 173
               

               Conread position:
               346-626
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               56, 21
               

               Conread position:
               352-582
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               5, 167
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               5, 178
               

               Conread position:
               352-583
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               352-664
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               5, 194
               

               Conread position:
               353-582
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               355-672
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               225
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               41, 164
               

               Conread position:
               356-553
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               46, 162
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               46, 162
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               46, 162
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               46, 111
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               46, 162
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               46, 151
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               46, 162
               

               Conread position:
               356-583
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               356-672
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               46, 104
               

               Conread position:
               359-583
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               43, 82
               

               Conread position:
               359-662
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               43, 78
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               43, 68
               

               Conread position:
               359-664
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               43, 283
               

               Conread position:
               359-672
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               43, 284
               

               Conread position:
               359-672
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               43, 158
               

               Conread position:
               366-582
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               369-667
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               226
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               34, 170
               

               Conread position:
               373-664
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               29, 269
               

               Conread position:
               401-671
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               59, 76
               

               Conread position:
               409-583
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               51, 108
               

               Conread position:
               409-672
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               41, 107
               

               Conread position:
               513-670
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               69, 120
               
Show alignments to all cow chromosomes.