Cow genome map

Conread name: Lym2-sn16_A03.f

Conread position: 1-421
Cow position:
Alignm length: 434
Alignm identity: 298
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 53

Conread position: 1-444
Cow position:
Alignm length: 464
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 63

Conread position: 1-460
Cow position:
Alignm length: 479
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 191

Conread position: 1-465
Cow position:
Alignm length: 483
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 1-465
Cow position:
Alignm length: 485
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 59

Conread position: 1-465
Cow position:
Alignm length: 486
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 35

Conread position: 1-465
Cow position:
Alignm length: 487
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 20

Conread position: 1-465
Cow position:
Alignm length: 491
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 87

Conread position: 1-465
Cow position:
Alignm length: 485
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 206

Conread position: 1-470
Cow position:
Alignm length: 490
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 2-337
Cow position:
Alignm length: 350
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 53

Conread position: 2-364
Cow position:
Alignm length: 392
Alignm identity: 266
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 21, 98

Conread position: 2-364
Cow position:
Alignm length: 375
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 35

Conread position: 2-458
Cow position:
Alignm length: 483
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 133

Conread position: 2-461
Cow position:
Alignm length: 480
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 39

Conread position: 2-464
Cow position:
Alignm length: 476
Alignm identity: 311
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 15, 75

Conread position: 2-465
Cow position:
Alignm length: 474
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 65

Conread position: 2-465
Cow position:
Alignm length: 483
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 97

Conread position: 2-465
Cow position:
Alignm length: 488
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 185

Conread position: 2-465
Cow position:
Alignm length: 497
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 187

Conread position: 2-466
Cow position:
Alignm length: 486
Alignm identity: 317
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 92, 36

Conread position: 3-464
Cow position:
Alignm length: 484
Alignm identity: 308
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 22, 381

Conread position: 4-352
Cow position:
Alignm length: 363
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 264

Conread position: 4-360
Cow position:
Alignm length: 371
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-368
Cow position:
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 79

Conread position: 4-375
Cow position:
Alignm length: 400
Alignm identity: 284
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 18, 199

Conread position: 4-383
Cow position:
Alignm length: 399
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 111

Conread position: 4-461
Cow position:
Alignm length: 477
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 157

Conread position: 4-464
Cow position:
Alignm length: 481
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 243

Conread position: 4-465
Cow position:
Alignm length: 490
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 481
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 26

Conread position: 4-465
Cow position:
Alignm length: 481
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 483
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 172

Conread position: 4-465
Cow position:
Alignm length: 480
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 203

Conread position: 4-465
Cow position:
Alignm length: 487
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 181

Conread position: 4-465
Cow position:
Alignm length: 485
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 491
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 137

Conread position: 4-465
Cow position:
Alignm length: 483
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 203

Conread position: 4-465
Cow position:
Alignm length: 480
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 83

Conread position: 4-465
Cow position:
Alignm length: 475
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 116

Conread position: 4-465
Cow position:
Alignm length: 481
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 0

Conread position: 4-465
Cow position:
Alignm length: 495
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 436

Conread position: 4-465
Cow position:
Alignm length: 485
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 60

Conread position: 4-465
Cow position:
Alignm length: 483
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 102

Conread position: 4-465
Cow position:
Alignm length: 484
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 120

Conread position: 4-465
Cow position:
Alignm length: 484
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 26

Conread position: 4-465
Cow position:
Alignm length: 483
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 317

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 136

Conread position: 4-465
Cow position:
Alignm length: 484
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 210

Conread position: 4-465
Cow position:
Alignm length: 483
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 116

Conread position: 4-465
Cow position:
Alignm length: 491
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 26

Conread position: 4-465
Cow position:
Alignm length: 485
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 120

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 203

Conread position: 4-465
Cow position:
Alignm length: 479
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 26

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 203

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 198

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 491
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 125

Conread position: 4-465
Cow position:
Alignm length: 483
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 147

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 203

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 4-465
Cow position:
Alignm length: 483
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 413

Conread position: 4-465
Cow position:
Alignm length: 481
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 267

Conread position: 4-465
Cow position:
Alignm length: 485
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 235

Conread position: 4-465
Cow position:
Alignm length: 480
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 203

Conread position: 4-465
Cow position:
Alignm length: 481
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 154

Conread position: 4-465
Cow position:
Alignm length: 485
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 428

Conread position: 4-465
Cow position:
Alignm length: 480
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 281, 26

Conread position: 4-465
Cow position:
Alignm length: 481
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 479
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 45

Conread position: 4-465
Cow position:
Alignm length: 474
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 203

Conread position: 4-465
Cow position:
Alignm length: 477
Alignm identity: 315
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 280, 26

Conread position: 5-421
Cow position:
Alignm length: 436
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 425

Conread position: 5-463
Cow position:
Alignm length: 487
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 39

Conread position: 5-465
Cow position:
Alignm length: 487
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 189

Conread position: 6-461
Cow position:
Alignm length: 477
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 135

Conread position: 7-389
Cow position:
Alignm length: 396
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 112

Conread position: 7-464
Cow position:
Alignm length: 478
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 47

Conread position: 7-465
Cow position:
Alignm length: 487
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 106

Conread position: 7-465
Cow position:
Alignm length: 479
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 7-465
Cow position:
Alignm length: 479
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 28

Conread position: 9-368
Cow position:
Alignm length: 369
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 89

Conread position: 10-465
Cow position:
Alignm length: 476
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 11-368
Cow position:
Alignm length: 380
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 142

Conread position: 14-383
Cow position:
Alignm length: 385
Alignm identity: 261
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 145, 10

Conread position: 15-465
Cow position:
Alignm length: 479
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 16

Conread position: 16-465
Cow position:
Alignm length: 463
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 207

Conread position: 17-460
Cow position:
Alignm length: 464
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 306

Conread position: 21-470
Cow position:
Alignm length: 474
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 51

Conread position: 23-481
Cow position:
Alignm length: 460
Alignm identity: 313
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 268, 12

Conread position: 25-362
Cow position:
Alignm length: 350
Alignm identity: 237
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 91, 38

Conread position: 26-391
Cow position:
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 54

Conread position: 31-465
Cow position:
Alignm length: 455
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 97

Conread position: 39-465
Cow position:
Alignm length: 434
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 227

Conread position: 41-465
Cow position:
Alignm length: 445
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 128

Conread position: 44-465
Cow position:
Alignm length: 443
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 0

Conread position: 52-467
Cow position:
Alignm length: 422
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 25

Conread position: 54-465
Cow position:
Alignm length: 426
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 169

Conread position: 57-463
Cow position:
Alignm length: 432
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 108

Conread position: 76-465
Cow position:
Alignm length: 409
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 162

Conread position: 79-462
Cow position:
Alignm length: 396
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 128

Conread position: 94-462
Cow position:
Alignm length: 387
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 150

Conread position: 97-461
Cow position:
Alignm length: 376
Alignm identity: 247
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 127, 39

Conread position: 97-465
Cow position:
Alignm length: 395
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 154

Conread position: 97-465
Cow position:
Alignm length: 388
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 0

Conread position: 98-465
Cow position:
Alignm length: 387
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 0

Conread position: 102-464
Cow position:
Alignm length: 383
Alignm identity: 265
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 137, 96

Conread position: 108-464
Cow position:
Alignm length: 366
Alignm identity: 252
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 243, 51

Conread position: 114-464
Cow position:
Alignm length: 369
Alignm identity: 256
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 171, 9

Conread position: 126-465
Cow position:
Alignm length: 355
Alignm identity: 246
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 39, 68

Conread position: 144-467
Cow position:
Alignm length: 343
Alignm identity: 236
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 137, 44

Conread position: 145-334
Cow position:
Alignm length: 194
Alignm identity: 156
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 145, 88

Conread position: 148-456
Cow position:
Alignm length: 331
Alignm identity: 228
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 140, 50

Conread position: 153-467
Cow position:
Alignm length: 332
Alignm identity: 232
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 56, 35

Conread position: 159-393
Cow position:
Alignm length: 250
Alignm identity: 183
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 14, 0

Conread position: 159-465
Cow position:
Alignm length: 326
Alignm identity: 226
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 129, 47

Conread position: 159-465
Cow position:
Alignm length: 327
Alignm identity: 234
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 129, 164

Conread position: 163-456
Cow position:
Alignm length: 316
Alignm identity: 218
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 127, 164

Conread position: 163-463
Cow position:
Alignm length: 320
Alignm identity: 224
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 121, 16

Conread position: 181-465
Cow position:
Alignm length: 304
Alignm identity: 214
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 103, 0

Conread position: 224-465
Cow position:
Alignm length: 261
Alignm identity: 182
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 248-465
Cow position:
Alignm length: 232
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 294-464
Cow position:
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 78, 0

Show alignments to all cow chromosomes.