Cow genome map

Conread name: Lym2-sn16_A03.f

Conread position: 1-375
Cow position:
Alignm length: 387
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 1-421
Cow position:
Alignm length: 453
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 1-464
Cow position:
Alignm length: 494
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 210

Conread position: 1-465
Cow position:
Alignm length: 502
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 29

Conread position: 1-465
Cow position:
Alignm length: 478
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 29

Conread position: 1-465
Cow position:
Alignm length: 483
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 29

Conread position: 2-368
Cow position:
Alignm length: 381
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 138

Conread position: 2-368
Cow position:
Alignm length: 382
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 125

Conread position: 2-387
Cow position:
Alignm length: 401
Alignm identity: 280
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 19, 96

Conread position: 2-421
Cow position:
Alignm length: 438
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 19

Conread position: 2-456
Cow position:
Alignm length: 484
Alignm identity: 319
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 137, 117

Conread position: 2-461
Cow position:
Alignm length: 480
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 170

Conread position: 2-464
Cow position:
Alignm length: 488
Alignm identity: 323
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 126, 93

Conread position: 2-464
Cow position:
Alignm length: 484
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 80

Conread position: 2-465
Cow position:
Alignm length: 484
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 55

Conread position: 2-465
Cow position:
Alignm length: 483
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 188

Conread position: 3-465
Cow position:
Alignm length: 484
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 42

Conread position: 3-465
Cow position:
Alignm length: 487
Alignm identity: 313
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 18

Conread position: 4-338
Cow position:
Alignm length: 346
Alignm identity: 249
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 78

Conread position: 4-368
Cow position:
Alignm length: 379
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 115

Conread position: 4-382
Cow position:
Alignm length: 393
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 111

Conread position: 4-383
Cow position:
Alignm length: 396
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 239

Conread position: 4-463
Cow position:
Alignm length: 482
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 102

Conread position: 4-464
Cow position:
Alignm length: 480
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 0

Conread position: 4-464
Cow position:
Alignm length: 478
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 27

Conread position: 4-465
Cow position:
Alignm length: 479
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 473
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 203

Conread position: 4-465
Cow position:
Alignm length: 484
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 226

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 479
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 480
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 188

Conread position: 4-465
Cow position:
Alignm length: 486
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 199

Conread position: 4-465
Cow position:
Alignm length: 481
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 188

Conread position: 4-465
Cow position:
Alignm length: 489
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 274

Conread position: 4-465
Cow position:
Alignm length: 483
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 102

Conread position: 4-465
Cow position:
Alignm length: 475
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 195

Conread position: 4-465
Cow position:
Alignm length: 473
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 492
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 485
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 187

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 497
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 213

Conread position: 4-465
Cow position:
Alignm length: 488
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 4-465
Cow position:
Alignm length: 486
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 26

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 186

Conread position: 4-465
Cow position:
Alignm length: 479
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 197

Conread position: 4-465
Cow position:
Alignm length: 482
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 5-456
Cow position:
Alignm length: 472
Alignm identity: 322
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 17, 52

Conread position: 8-465
Cow position:
Alignm length: 477
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 193

Conread position: 11-465
Cow position:
Alignm length: 473
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 152

Conread position: 13-351
Cow position:
Alignm length: 349
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 12

Conread position: 13-465
Cow position:
Alignm length: 477
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 92

Conread position: 14-466
Cow position:
Alignm length: 484
Alignm identity: 320
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 24, 152

Conread position: 16-465
Cow position:
Alignm length: 469
Alignm identity: 308
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 120, 179

Conread position: 24-465
Cow position:
Alignm length: 462
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 198

Conread position: 26-465
Cow position:
Alignm length: 458
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 22

Conread position: 31-360
Cow position:
Alignm length: 350
Alignm identity: 250
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 27, 77

Conread position: 33-465
Cow position:
Alignm length: 459
Alignm identity: 313
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 254, 51

Conread position: 41-464
Cow position:
Alignm length: 444
Alignm identity: 295
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 189, 42

Conread position: 46-465
Cow position:
Alignm length: 445
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 11

Conread position: 68-450
Cow position:
Alignm length: 400
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 296

Conread position: 70-464
Cow position:
Alignm length: 409
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 17

Conread position: 77-349
Cow position:
Alignm length: 290
Alignm identity: 209
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 97

Conread position: 87-465
Cow position:
Alignm length: 398
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 0

Conread position: 133-464
Cow position:
Alignm length: 349
Alignm identity: 238
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 155, 53

Conread position: 136-465
Cow position:
Alignm length: 353
Alignm identity: 242
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 78, 139

Conread position: 144-465
Cow position:
Alignm length: 342
Alignm identity: 245
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 148, 44

Conread position: 155-465
Cow position:
Alignm length: 327
Alignm identity: 234
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 128, 31

Conread position: 161-465
Cow position:
Alignm length: 322
Alignm identity: 222
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 24

Conread position: 176-465
Cow position:
Alignm length: 302
Alignm identity: 215
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 7, 213

Conread position: 181-465
Cow position:
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 158

Conread position: 194-467
Cow position:
Alignm length: 291
Alignm identity: 200
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 94, 34

Conread position: 213-465
Cow position:
Alignm length: 272
Alignm identity: 192
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 71, 0

Conread position: 294-465
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 50, 0

Show alignments to all cow chromosomes.