Cow genome map
| Conread name: | Lym2-sn16_A03.f |
| Conread position: | 1-465 |
| Cow position: | chr12:12295103-12294612 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 78 |
| Conread position: | 1-465 |
| Cow position: | chr12:30686307-30685824 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 177 |
| Conread position: | 1-465 |
| Cow position: | chr12:34175919-34175436 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 270 |
| Conread position: | 1-465 |
| Cow position: | chr12:37561570-37561089 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 117 |
| Conread position: | 2-456 |
| Cow position: | chr12:36573486-36573945 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 301 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 288, 42 |
| Conread position: | 2-465 |
| Cow position: | chr12:21129599-21129125 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 164 |
| Conread position: | 2-469 |
| Cow position: | chr12:2284564-2284091 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 33 |
| Conread position: | 3-355 |
| Cow position: | chr12:27515222-27514865 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 16, 74 |
| Conread position: | 3-461 |
| Cow position: | chr12:26922468-26922003 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 129, 48 |
| Conread position: | 3-464 |
| Cow position: | chr12:35632956-35633428 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 325 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 285, 16 |
| Conread position: | 3-465 |
| Cow position: | chr12:24432332-24432801 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 151 |
| Conread position: | 4-363 |
| Cow position: | chr12:1404831-1404462 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 4-368 |
| Cow position: | chr12:21483959-21483602 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 18, 42 |
| Conread position: | 4-383 |
| Cow position: | chr12:758009-757628 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 32 |
| Conread position: | 4-464 |
| Cow position: | chr12:17968347-17967886 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 314 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 119, 31 |
| Conread position: | 4-465 |
| Cow position: | chr12:1407395-1406913 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-465 |
| Cow position: | chr12:3179931-3179459 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 203 |
| Conread position: | 4-465 |
| Cow position: | chr12:3363504-3363025 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 271 |
| Conread position: | 4-465 |
| Cow position: | chr12:3717711-3718181 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 387 |
| Conread position: | 4-465 |
| Cow position: | chr12:12755596-12756077 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr12:24993408-24993889 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr12:27853388-27853877 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 4-465 |
| Cow position: | chr12:32656114-32655637 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 186 |
| Conread position: | 4-469 |
| Cow position: | chr12:20460662-20461144 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 203 |
| Conread position: | 5-368 |
| Cow position: | chr12:18467351-18466976 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 113 |
| Conread position: | 5-383 |
| Cow position: | chr12:8143076-8143436 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 277 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 12, 56 |
| Conread position: | 5-465 |
| Cow position: | chr12:21944677-21944218 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 202 |
| Conread position: | 7-461 |
| Cow position: | chr12:24980241-24979772 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 200 |
| Conread position: | 9-465 |
| Cow position: | chr12:21211229-21210752 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 14-456 |
| Cow position: | chr12:29446272-29445827 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 50 |
| Conread position: | 16-465 |
| Cow position: | chr12:21091190-21091645 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 15 |
| Conread position: | 40-465 |
| Cow position: | chr12:23100528-23100976 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 42, 135 |
| Conread position: | 70-362 |
| Cow position: | chr12:27930261-27930563 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 136 |
| Conread position: | 80-465 |
| Cow position: | chr12:14213685-14214089 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 159-465 |
| Cow position: | chr12:14659946-14660261 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 129, 18 |
| Conread position: | 159-465 |
| Cow position: | chr12:20845317-20844992 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 128, 176 |
Show alignments to all cow chromosomes.