Cow genome map
| Conread name: | Lym2-sn16_A03.f |
| Conread position: | 1-384 |
| Cow position: | chr15:2806649-2807042 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 206 |
| Conread position: | 1-446 |
| Cow position: | chr15:29969130-29969582 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 63 |
| Conread position: | 1-465 |
| Cow position: | chr15:4387978-4387499 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 29 |
| Conread position: | 1-465 |
| Cow position: | chr15:6119641-6119166 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-465 |
| Cow position: | chr15:7236536-7236055 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 29 |
| Conread position: | 1-466 |
| Cow position: | chr15:4673473-4672986 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 425 |
| Conread position: | 1-493 |
| Cow position: | chr15:12365633-12365137 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 262, 19 |
| Conread position: | 2-421 |
| Cow position: | chr15:8411262-8410831 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 68 |
| Conread position: | 2-461 |
| Cow position: | chr15:2670971-2671436 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 52 |
| Conread position: | 2-465 |
| Cow position: | chr15:9432157-9431679 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 28 |
| Conread position: | 2-465 |
| Cow position: | chr15:13679615-13679152 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 33 |
| Conread position: | 2-465 |
| Cow position: | chr15:16788552-16789034 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 125 |
| Conread position: | 3-389 |
| Cow position: | chr15:4917423-4917027 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 108 |
| Conread position: | 4-383 |
| Cow position: | chr15:8101682-8101289 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 119 |
| Conread position: | 4-383 |
| Cow position: | chr15:10825695-10825304 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 110 |
| Conread position: | 4-456 |
| Cow position: | chr15:14579921-14580393 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 4-464 |
| Cow position: | chr15:2014725-2014255 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 189 |
| Conread position: | 4-465 |
| Cow position: | chr15:59861-59403 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 312 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 18, 84 |
| Conread position: | 4-465 |
| Cow position: | chr15:1784559-1784081 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 268 |
| Conread position: | 4-465 |
| Cow position: | chr15:2645421-2645902 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr15:4727431-4726948 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 204 |
| Conread position: | 4-465 |
| Cow position: | chr15:4948730-4948249 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr15:5009411-5009890 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 189 |
| Conread position: | 4-465 |
| Cow position: | chr15:5497281-5496800 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 183 |
| Conread position: | 4-465 |
| Cow position: | chr15:5939443-5939918 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 178 |
| Conread position: | 4-465 |
| Cow position: | chr15:6080930-6080457 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 203 |
| Conread position: | 4-465 |
| Cow position: | chr15:6551538-6552018 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 74 |
| Conread position: | 4-465 |
| Cow position: | chr15:6615242-6614764 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 26 |
| Conread position: | 4-465 |
| Cow position: | chr15:7262850-7262361 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 26 |
| Conread position: | 4-465 |
| Cow position: | chr15:7565227-7564743 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 145 |
| Conread position: | 4-465 |
| Cow position: | chr15:13430048-13429568 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 267 |
| Conread position: | 4-465 |
| Cow position: | chr15:15344879-15345360 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr15:16189544-16190025 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr15:18229290-18228809 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr15:18265537-18266015 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 203 |
| Conread position: | 4-465 |
| Cow position: | chr15:20412823-20412341 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 4-465 |
| Cow position: | chr15:21533904-21534377 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 226 |
| Conread position: | 4-465 |
| Cow position: | chr15:24297419-24296938 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr15:25132180-25131699 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr15:25204781-25205261 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr15:28487902-28488379 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 26 |
| Conread position: | 4-465 |
| Cow position: | chr15:32713431-32712951 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 111 |
| Conread position: | 4-465 |
| Cow position: | chr15:33123607-33123126 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 4-465 |
| Cow position: | chr15:35738004-35737542 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 69 |
| Conread position: | 4-465 |
| Cow position: | chr15:36330234-36330714 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 281, 26 |
| Conread position: | 4-465 |
| Cow position: | chr15:36623440-36623915 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 181 |
| Conread position: | 4-465 |
| Cow position: | chr15:42532146-42531665 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 4-465 |
| Cow position: | chr15:51219966-51219488 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 230 |
| Conread position: | 4-469 |
| Cow position: | chr15:32696391-32695892 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 48 |
| Conread position: | 4-470 |
| Cow position: | chr15:50149547-50149061 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 5-438 |
| Cow position: | chr15:2927470-2927029 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 19 |
| Conread position: | 5-465 |
| Cow position: | chr15:7940655-7940180 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 113 |
| Conread position: | 5-465 |
| Cow position: | chr15:51911318-51911790 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 117 |
| Conread position: | 7-465 |
| Cow position: | chr15:17397945-17397488 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 205 |
| Conread position: | 7-465 |
| Cow position: | chr15:35751074-35751553 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 42 |
| Conread position: | 14-465 |
| Cow position: | chr15:610033-610496 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 63 |
| Conread position: | 16-421 |
| Cow position: | chr15:25553215-25552783 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 31 |
| Conread position: | 16-465 |
| Cow position: | chr15:24796098-24795636 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 101 |
| Conread position: | 22-464 |
| Cow position: | chr15:13538655-13539106 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 264, 18 |
| Conread position: | 26-385 |
| Cow position: | chr15:16509066-16508694 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 260, 133 |
| Conread position: | 27-463 |
| Cow position: | chr15:17215944-17216393 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 170 |
| Conread position: | 45-459 |
| Cow position: | chr15:4107131-4107573 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 300 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 60, 162 |
| Conread position: | 68-421 |
| Cow position: | chr15:25490429-25490069 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 220, 132 |
| Conread position: | 69-364 |
| Cow position: | chr15:29331766-29332066 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 200 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 219, 53 |
| Conread position: | 78-451 |
| Cow position: | chr15:2212382-2212770 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 145 |
| Conread position: | 87-465 |
| Cow position: | chr15:9736767-9737157 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 276 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 201, 50 |
| Conread position: | 96-460 |
| Cow position: | chr15:49522740-49522371 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 21 |
| Conread position: | 98-444 |
| Cow position: | chr15:36669764-36669429 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 250, 23 |
| Conread position: | 98-465 |
| Cow position: | chr15:19735912-19736298 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 225 |
| Conread position: | 102-465 |
| Cow position: | chr15:42318673-42319037 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 12, 89 |
| Conread position: | 152-465 |
| Cow position: | chr15:4814655-4814329 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 221 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 142, 62 |
| Conread position: | 152-465 |
| Cow position: | chr15:39447480-39447811 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 118, 34 |
| Conread position: | 158-470 |
| Cow position: | chr15:1669490-1669181 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 5, 32 |
| Conread position: | 159-465 |
| Cow position: | chr15:314012-314334 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 116, 171 |
| Conread position: | 159-465 |
| Cow position: | chr15:4824465-4824150 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 129, 68 |
| Conread position: | 159-465 |
| Cow position: | chr15:9002160-9002479 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 226 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 129, 238 |
| Conread position: | 160-464 |
| Cow position: | chr15:36279894-36280199 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 132, 217 |
| Conread position: | 228-465 |
| Cow position: | chr15:2019129-2018876 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 238 |
Show alignments to all cow chromosomes.